Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 HMGN2P18-201ENST00000450680 270 ntBASIC2.33□□□□□ -2.04
CAPN3P20807 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.33□□□□□ -2.04
CAPN3P20807 RPS23P5-201ENST00000495419 428 ntBASIC2.33□□□□□ -2.04
CAPN3P20807 Y_RNA.673-201ENST00000516306 88 ntBASIC2.33□□□□□ -2.04
CAPN3P20807 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.33□□□□□ -2.04
CAPN3P20807 AC026470.2-201ENST00000561492 181 ntBASIC2.33□□□□□ -2.04
CAPN3P20807 AC025754.2-201ENST00000606491 432 ntBASIC2.33□□□□□ -2.04
CAPN3P20807 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CAPN3P20807 AC093913.1-201ENST00000614178 329 ntBASIC2.33□□□□□ -2.04
CAPN3P20807 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.33□□□□□ -2.04
CAPN3P20807 MIR3688-2-201ENST00000636963 87 ntBASIC2.33□□□□□ -2.04
CAPN3P20807 RNU6-1252P-201ENST00000363054 104 ntBASIC2.32□□□□□ -2.04
CAPN3P20807 RNU6-23P-201ENST00000363283 107 ntBASIC2.32□□□□□ -2.04
CAPN3P20807 Y_RNA.238-201ENST00000364441 102 ntBASIC2.32□□□□□ -2.04
CAPN3P20807 SNORA29-201ENST00000384183 140 ntBASIC2.32□□□□□ -2.04
CAPN3P20807 RNU6-784P-201ENST00000384330 106 ntBASIC2.32□□□□□ -2.04
CAPN3P20807 SNORA41-201ENST00000384675 132 ntBASIC2.32□□□□□ -2.04
CAPN3P20807 AL033519.2-201ENST00000403958 392 ntBASIC2.32□□□□□ -2.04
CAPN3P20807 RNA5SP247-201ENST00000411181 105 ntBASIC2.32□□□□□ -2.04
CAPN3P20807 AL158823.1-201ENST00000418441 478 ntBASIC2.32□□□□□ -2.04
CAPN3P20807 DPH3P2-201ENST00000422618 250 ntBASIC2.32□□□□□ -2.04
CAPN3P20807 USP9YP28-201ENST00000435142 589 ntBASIC2.32□□□□□ -2.04
CAPN3P20807 UBE2V1P8-201ENST00000437166 265 ntBASIC2.32□□□□□ -2.04
CAPN3P20807 AL353689.1-201ENST00000438895 199 ntBASIC2.32□□□□□ -2.04
CAPN3P20807 RPS27P21-201ENST00000486977 252 ntBASIC2.32□□□□□ -2.04
CAPN3P20807 ACA59.1-201ENST00000515966 143 ntBASIC2.32□□□□□ -2.04
CAPN3P20807 RNU6-548P-201ENST00000517083 115 ntBASIC2.32□□□□□ -2.04
CAPN3P20807 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.32□□□□□ -2.04
CAPN3P20807 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.32□□□□□ -2.04
CAPN3P20807 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.32□□□□□ -2.04
CAPN3P20807 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.32□□□□□ -2.04
CAPN3P20807 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.32□□□□□ -2.04
CAPN3P20807 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.32□□□□□ -2.04
CAPN3P20807 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.32□□□□□ -2.04
CAPN3P20807 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.32□□□□□ -2.04
CAPN3P20807 MIR3662-201ENST00000637030 95 ntBASIC2.32□□□□□ -2.04
CAPN3P20807 AC073869.6-201ENST00000640656 341 ntBASIC2.32□□□□□ -2.04
CAPN3P20807 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CAPN3P20807 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CAPN3P20807 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CAPN3P20807 Y_RNA.332-201ENST00000365271 113 ntBASIC2.31□□□□□ -2.04
CAPN3P20807 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
CAPN3P20807 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CAPN3P20807 SNORD115-47-201ENST00000391226 86 ntBASIC2.31□□□□□ -2.04
CAPN3P20807 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.31□□□□□ -2.04
CAPN3P20807 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.31□□□□□ -2.04
CAPN3P20807 AC123900.1-201ENST00000420390 96 ntBASIC2.31□□□□□ -2.04
CAPN3P20807 BX510359.4-201ENST00000423750 193 ntBASIC2.31□□□□□ -2.04
CAPN3P20807 AL139415.2-201ENST00000431968 163 ntBASIC2.31□□□□□ -2.04
CAPN3P20807 MTND4LP16-201ENST00000440828 295 ntBASIC2.31□□□□□ -2.04
CAPN3P20807 RPL23AP6-201ENST00000446637 472 ntBASIC2.31□□□□□ -2.04
CAPN3P20807 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.31□□□□□ -2.04
CAPN3P20807 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.31□□□□□ -2.04
CAPN3P20807 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.31□□□□□ -2.04
CAPN3P20807 RNA5SP320-201ENST00000516263 124 ntBASIC2.31□□□□□ -2.04
CAPN3P20807 AP005639.2-201ENST00000527592 928 ntBASIC2.31□□□□□ -2.04
CAPN3P20807 AC087241.2-201ENST00000535801 324 ntBASIC2.31□□□□□ -2.04
CAPN3P20807 POLR3GP2-201ENST00000588366 668 ntBASIC2.31□□□□□ -2.04
CAPN3P20807 AC243960.4-201ENST00000600532 288 ntBASIC2.31□□□□□ -2.04
CAPN3P20807 AC067747.1-201ENST00000608026 250 ntBASIC2.31□□□□□ -2.04
CAPN3P20807 RMST_6.1-201ENST00000611980 203 ntBASIC2.31□□□□□ -2.04
CAPN3P20807 AL138726.1-201ENST00000614873 333 ntBASIC2.31□□□□□ -2.04
CAPN3P20807 U4.3-201ENST00000621047 82 ntBASIC2.31□□□□□ -2.04
CAPN3P20807 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CAPN3P20807 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CAPN3P20807 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CAPN3P20807 SNORA32.2-201ENST00000384049 122 ntBASIC2.3□□□□□ -2.04
CAPN3P20807 SNORA80E-201ENST00000384744 137 ntBASIC2.3□□□□□ -2.04
CAPN3P20807 MIR518C-201ENST00000384822 101 ntBASIC2.3□□□□□ -2.04
CAPN3P20807 MIR27B-201ENST00000385129 97 ntBASIC2.3□□□□□ -2.04
CAPN3P20807 MIR1277-201ENST00000408536 78 ntBASIC2.3□□□□□ -2.04
CAPN3P20807 RNU2-41P-201ENST00000410991 178 ntBASIC2.3□□□□□ -2.04
CAPN3P20807 HMGN2P3-201ENST00000433603 273 ntBASIC2.3□□□□□ -2.04
CAPN3P20807 HMGN2P5-201ENST00000436882 273 ntBASIC2.3□□□□□ -2.04
CAPN3P20807 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.3□□□□□ -2.04
CAPN3P20807 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.3□□□□□ -2.04
CAPN3P20807 RNU7-187P-201ENST00000458985 68 ntBASIC2.3□□□□□ -2.04
CAPN3P20807 RNU7-14P-201ENST00000459331 62 ntBASIC2.3□□□□□ -2.04
CAPN3P20807 RNU7-66P-201ENST00000459469 62 ntBASIC2.3□□□□□ -2.04
CAPN3P20807 RN7SKP24-201ENST00000515888 284 ntBASIC2.3□□□□□ -2.04
CAPN3P20807 MIR514B-201ENST00000516774 80 ntBASIC2.3□□□□□ -2.04
CAPN3P20807 AP005660.1-201ENST00000522972 293 ntBASIC2.3□□□□□ -2.04
CAPN3P20807 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.3□□□□□ -2.04
CAPN3P20807 AC023043.2-201ENST00000589678 1026 ntBASIC2.3□□□□□ -2.04
CAPN3P20807 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.3□□□□□ -2.04
CAPN3P20807 AC068790.6-201ENST00000602558 258 ntBASIC2.3□□□□□ -2.04
CAPN3P20807 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.3□□□□□ -2.04
CAPN3P20807 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CAPN3P20807 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CAPN3P20807 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CAPN3P20807 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.3□□□□□ -2.04
CAPN3P20807 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CAPN3P20807 LINC02555-201ENST00000563933 1951 ntBASIC2.29□□□□□ -2.04
CAPN3P20807 RNU1-76P-201ENST00000362903 159 ntBASIC2.29□□□□□ -2.04
CAPN3P20807 RNU6-1164P-201ENST00000364428 107 ntBASIC2.29□□□□□ -2.04
CAPN3P20807 SNORD31B-201ENST00000364977 69 ntBASIC2.29□□□□□ -2.04
CAPN3P20807 RNA5SP212-201ENST00000391223 107 ntBASIC2.29□□□□□ -2.04
CAPN3P20807 MIR1283-2-201ENST00000408621 87 ntBASIC2.29□□□□□ -2.04
CAPN3P20807 FCF1P9-201ENST00000412546 282 ntBASIC2.29□□□□□ -2.04
CAPN3P20807 EIF1P1-201ENST00000421436 341 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms