Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 RNU6-245P-201ENST00000384020 107 ntBASIC4.06□□□□□ -1.76
PTPRAP18433 RNU6-1310P-201ENST00000384153 107 ntBASIC4.06□□□□□ -1.76
PTPRAP18433 RNU6-622P-201ENST00000384272 103 ntBASIC4.06□□□□□ -1.76
PTPRAP18433 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.06□□□□□ -1.76
PTPRAP18433 RNA5SP390-201ENST00000410191 113 ntBASIC4.06□□□□□ -1.76
PTPRAP18433 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.06□□□□□ -1.76
PTPRAP18433 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.06□□□□□ -1.76
PTPRAP18433 AL049873.1-201ENST00000480540 376 ntBASIC4.06□□□□□ -1.76
PTPRAP18433 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.06□□□□□ -1.76
PTPRAP18433 ACA59.2-201ENST00000517061 156 ntBASIC4.06□□□□□ -1.76
PTPRAP18433 NACAP3-201ENST00000552100 481 ntBASIC4.06□□□□□ -1.76
PTPRAP18433 MIR5680-201ENST00000577577 84 ntBASIC4.06□□□□□ -1.76
PTPRAP18433 AC100821.1-201ENST00000523153 2479 ntBASIC4.06□□□□□ -1.76
PTPRAP18433 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTPRAP18433 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTPRAP18433 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PTPRAP18433 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.06□□□□□ -1.76
PTPRAP18433 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PTPRAP18433 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTPRAP18433 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.05□□□□□ -1.76
PTPRAP18433 MIR708-201ENST00000390708 88 ntBASIC4.05□□□□□ -1.76
PTPRAP18433 RNU6-1248P-201ENST00000391096 64 ntBASIC4.05□□□□□ -1.76
PTPRAP18433 RNA5SP39-201ENST00000411245 120 ntBASIC4.05□□□□□ -1.76
PTPRAP18433 Z75741.1-201ENST00000446793 314 ntBASIC4.05□□□□□ -1.76
PTPRAP18433 AL645939.1-201ENST00000453429 797 ntBASIC4.05□□□□□ -1.76
PTPRAP18433 AP001486.1-201ENST00000463339 476 ntBASIC4.05□□□□□ -1.76
PTPRAP18433 AC005840.1-201ENST00000498412 377 ntBASIC4.05□□□□□ -1.76
PTPRAP18433 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPRAP18433 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.05□□□□□ -1.76
PTPRAP18433 MIR3690-201ENST00000580266 75 ntBASIC4.05□□□□□ -1.76
PTPRAP18433 AC004825.2-201ENST00000616634 455 ntBASIC4.05□□□□□ -1.76
PTPRAP18433 Y_RNA.778-201ENST00000620203 90 ntBASIC4.05□□□□□ -1.76
PTPRAP18433 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTPRAP18433 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PTPRAP18433 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.05□□□□□ -1.76
PTPRAP18433 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTPRAP18433 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.05□□□□□ -1.76
PTPRAP18433 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.04□□□□□ -1.76
PTPRAP18433 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
PTPRAP18433 MAPK10-253ENST00000641010 4072 ntBASIC4.04□□□□□ -1.76
PTPRAP18433 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.04□□□□□ -1.76
PTPRAP18433 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPRAP18433 RNA5SP374-201ENST00000362939 125 ntBASIC4.04□□□□□ -1.76
PTPRAP18433 RNU6-270P-201ENST00000364131 105 ntBASIC4.04□□□□□ -1.76
PTPRAP18433 RNU6-487P-201ENST00000365430 104 ntBASIC4.04□□□□□ -1.76
PTPRAP18433 MIR569-201ENST00000385228 96 ntBASIC4.04□□□□□ -1.76
PTPRAP18433 EI24P2-201ENST00000397776 1076 ntBASIC4.04□□□□□ -1.76
PTPRAP18433 MIR208B-201ENST00000401172 77 ntBASIC4.04□□□□□ -1.76
PTPRAP18433 RNU6-257P-201ENST00000410238 98 ntBASIC4.04□□□□□ -1.76
PTPRAP18433 AC096649.2-201ENST00000416186 393 ntBASIC4.04□□□□□ -1.76
PTPRAP18433 YPEL5P1-201ENST00000419731 367 ntBASIC4.04□□□□□ -1.76
PTPRAP18433 AC099548.1-201ENST00000421443 426 ntBASIC4.04□□□□□ -1.76
PTPRAP18433 BPY2DP-201ENST00000422208 265 ntBASIC4.04□□□□□ -1.76
PTPRAP18433 RN7SL594P-201ENST00000470590 287 ntBASIC4.04□□□□□ -1.76
PTPRAP18433 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.04□□□□□ -1.76
PTPRAP18433 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTPRAP18433 FCF1P8-201ENST00000510322 597 ntBASIC4.04□□□□□ -1.76
PTPRAP18433 RN7SKP289-201ENST00000517244 295 ntBASIC4.04□□□□□ -1.76
PTPRAP18433 AC006199.1-201ENST00000548728 219 ntBASIC4.04□□□□□ -1.76
PTPRAP18433 SNORD98-201ENST00000636377 67 ntBASIC4.04□□□□□ -1.76
PTPRAP18433 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPRAP18433 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPRAP18433 FAM35BP-202ENST00000497389 3337 ntBASIC4.04□□□□□ -1.76
PTPRAP18433 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTPRAP18433 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.03□□□□□ -1.76
PTPRAP18433 RNU1-62P-201ENST00000362599 164 ntBASIC4.03□□□□□ -1.76
PTPRAP18433 RNU6-763P-201ENST00000390865 106 ntBASIC4.03□□□□□ -1.76
PTPRAP18433 RNA5SP475-201ENST00000410568 110 ntBASIC4.03□□□□□ -1.76
PTPRAP18433 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.03□□□□□ -1.76
PTPRAP18433 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.03□□□□□ -1.76
PTPRAP18433 U8.19-201ENST00000459095 133 ntBASIC4.03□□□□□ -1.76
PTPRAP18433 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.03□□□□□ -1.76
PTPRAP18433 AC100767.1-201ENST00000528178 123 ntBASIC4.03□□□□□ -1.76
PTPRAP18433 CYP4A27P-201ENST00000567218 190 ntBASIC4.03□□□□□ -1.76
PTPRAP18433 AC009127.3-201ENST00000570531 403 ntBASIC4.03□□□□□ -1.76
PTPRAP18433 MIR4325-201ENST00000583049 90 ntBASIC4.03□□□□□ -1.76
PTPRAP18433 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.03□□□□□ -1.76
PTPRAP18433 AL356575.1-201ENST00000603008 283 ntBASIC4.03□□□□□ -1.76
PTPRAP18433 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.03□□□□□ -1.76
PTPRAP18433 MIR4727-201ENST00000622232 55 ntBASIC4.03□□□□□ -1.76
PTPRAP18433 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.03□□□□□ -1.76
PTPRAP18433 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.03□□□□□ -1.76
PTPRAP18433 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTPRAP18433 MFSD8-233ENST00000641482 4860 ntBASIC4.03□□□□□ -1.76
PTPRAP18433 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTPRAP18433 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PTPRAP18433 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PTPRAP18433 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PTPRAP18433 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.02□□□□□ -1.77
PTPRAP18433 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTPRAP18433 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PTPRAP18433 CUL1P1-201ENST00000509510 2425 ntBASIC4.02□□□□□ -1.77
PTPRAP18433 Z83843.1-201ENST00000604070 3685 ntBASIC4.02□□□□□ -1.77
PTPRAP18433 RNA5SP42-201ENST00000364278 115 ntBASIC4.02□□□□□ -1.77
PTPRAP18433 U3.26-201ENST00000391236 204 ntBASIC4.02□□□□□ -1.77
PTPRAP18433 AC103975.1-201ENST00000482506 483 ntBASIC4.02□□□□□ -1.77
PTPRAP18433 MIR5004-201ENST00000579078 107 ntBASIC4.02□□□□□ -1.77
PTPRAP18433 MIR4276-201ENST00000584832 70 ntBASIC4.02□□□□□ -1.77
PTPRAP18433 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PTPRAP18433 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 225.6 ms