Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 U8.10-201ENST00000384260 133 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 HLFP1-201ENST00000402375 499 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 RNU2-2P-201ENST00000410396 191 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 RNU7-23P-201ENST00000459465 62 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 AP002884.2-201ENST00000471647 395 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 RNU2-4P-201ENST00000606190 192 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 U2.15-201ENST00000611544 191 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 U2.16-201ENST00000613119 191 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 U2.12-201ENST00000613778 191 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 AL357075.2-201ENST00000614906 189 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 U2.9-201ENST00000615427 191 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 U2.11-201ENST00000616345 191 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 U2.2-201ENST00000616535 191 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 U2.3-201ENST00000617785 191 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 U2.19-201ENST00000618602 191 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 RNU2-1-201ENST00000618664 191 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 U2.6-201ENST00000619225 191 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 U2.5-201ENST00000619465 191 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 Y_RNA.778-201ENST00000620203 90 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 U2.10-201ENST00000620268 191 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 AC006111.3-201ENST00000622137 383 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 AL353743.1-202ENST00000431724 1695 ntBASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CSB-PGBD3P0DP91 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.72□□□□□ -1.65
CSB-PGBD3P0DP91 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CSB-PGBD3P0DP91 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CSB-PGBD3P0DP91 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.72□□□□□ -1.65
CSB-PGBD3P0DP91 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
CSB-PGBD3P0DP91 RNU6-541P-201ENST00000384709 110 ntBASIC4.72□□□□□ -1.65
CSB-PGBD3P0DP91 RNU6-919P-201ENST00000516731 104 ntBASIC4.72□□□□□ -1.65
CSB-PGBD3P0DP91 AC016256.1-201ENST00000547971 354 ntBASIC4.72□□□□□ -1.65
CSB-PGBD3P0DP91 MIR3145-201ENST00000580727 82 ntBASIC4.72□□□□□ -1.65
CSB-PGBD3P0DP91 AC005176.2-201ENST00000596933 147 ntBASIC4.72□□□□□ -1.65
CSB-PGBD3P0DP91 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CSB-PGBD3P0DP91 ZNF204P-201ENST00000416749 2397 ntBASIC4.72□□□□□ -1.65
CSB-PGBD3P0DP91 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CSB-PGBD3P0DP91 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.72□□□□□ -1.65
CSB-PGBD3P0DP91 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
CSB-PGBD3P0DP91 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 MIR448-201ENST00000362131 111 ntBASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 Y_RNA.7-201ENST00000362352 102 ntBASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 RNU4-80P-201ENST00000363200 141 ntBASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 Y_RNA.218-201ENST00000364218 104 ntBASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 Y_RNA.238-201ENST00000364441 102 ntBASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 RNU6-312P-201ENST00000364629 107 ntBASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 Y_RNA.319-201ENST00000365138 92 ntBASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 RNU6-487P-201ENST00000365430 104 ntBASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 U3.26-201ENST00000391236 204 ntBASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 AC245291.1-201ENST00000419501 328 ntBASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 GPM6BP3-201ENST00000442797 145 ntBASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 AC093663.1-201ENST00000497190 394 ntBASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 AC016632.1-201ENST00000503994 196 ntBASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 RNU6-191P-201ENST00000516295 94 ntBASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 AC090897.2-201ENST00000581715 130 ntBASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 AL008718.3-201ENST00000610217 321 ntBASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 uc_338.32-201ENST00000615087 172 ntBASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 AP003355.3-201ENST00000623465 114 ntBASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CSB-PGBD3P0DP91 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CSB-PGBD3P0DP91 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CSB-PGBD3P0DP91 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CSB-PGBD3P0DP91 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CSB-PGBD3P0DP91 Y_RNA.23-201ENST00000362496 106 ntBASIC4.7□□□□□ -1.66
CSB-PGBD3P0DP91 RNU6-159P-201ENST00000391080 106 ntBASIC4.7□□□□□ -1.66
CSB-PGBD3P0DP91 RNA5SP390-201ENST00000410191 113 ntBASIC4.7□□□□□ -1.66
CSB-PGBD3P0DP91 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.7□□□□□ -1.66
CSB-PGBD3P0DP91 RPL39P29-201ENST00000447779 157 ntBASIC4.7□□□□□ -1.66
CSB-PGBD3P0DP91 HMGN2P7-201ENST00000456186 273 ntBASIC4.7□□□□□ -1.66
CSB-PGBD3P0DP91 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.7□□□□□ -1.66
CSB-PGBD3P0DP91 RPS27AP9-201ENST00000477681 438 ntBASIC4.7□□□□□ -1.66
CSB-PGBD3P0DP91 RN7SL504P-201ENST00000494496 287 ntBASIC4.7□□□□□ -1.66
CSB-PGBD3P0DP91 RNU6-971P-201ENST00000516920 106 ntBASIC4.7□□□□□ -1.66
CSB-PGBD3P0DP91 AC233702.2-202ENST00000562547 291 ntBASIC4.7□□□□□ -1.66
CSB-PGBD3P0DP91 AL137843.1-201ENST00000605078 385 ntBASIC4.7□□□□□ -1.66
CSB-PGBD3P0DP91 AC022441.3-201ENST00000605737 136 ntBASIC4.7□□□□□ -1.66
CSB-PGBD3P0DP91 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
CSB-PGBD3P0DP91 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.7□□□□□ -1.66
CSB-PGBD3P0DP91 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CSB-PGBD3P0DP91 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CSB-PGBD3P0DP91 AC010332.2-201ENST00000613083 1904 ntBASIC4.7□□□□□ -1.66
CSB-PGBD3P0DP91 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CSB-PGBD3P0DP91 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CSB-PGBD3P0DP91 RNA5SP374-201ENST00000362939 125 ntBASIC4.69□□□□□ -1.66
CSB-PGBD3P0DP91 RNU5B-2P-201ENST00000363036 113 ntBASIC4.69□□□□□ -1.66
CSB-PGBD3P0DP91 RNU6-622P-201ENST00000384272 103 ntBASIC4.69□□□□□ -1.66
CSB-PGBD3P0DP91 MIR3074-201ENST00000384885 81 ntBASIC4.69□□□□□ -1.66
CSB-PGBD3P0DP91 RNA5SP252-201ENST00000391131 119 ntBASIC4.69□□□□□ -1.66
CSB-PGBD3P0DP91 MTHFD2P2-201ENST00000407725 247 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms