Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MIR300-201ENST00000401138 83 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 ERHP2-201ENST00000402323 299 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 RNU6-607P-201ENST00000411283 108 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 C1DP2-201ENST00000418167 426 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 C1DP4-201ENST00000455429 424 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 AL163973.1-201ENST00000484753 577 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.26□□□□□ -2.37
CXCL1P09341 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.26□□□□□ -2.37
CXCL1P09341 AC116353.3-201ENST00000511215 249 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 AC010587.2-201ENST00000511727 448 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 RNU6-123P-201ENST00000516163 102 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 RNU6-922P-201ENST00000516753 99 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 AC107934.1-201ENST00000522215 217 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 AP001893.2-201ENST00000526949 202 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 TMF1P1-201ENST00000576058 373 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 MIR4714-201ENST00000580728 77 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.26□□□□□ -2.37
CXCL1P09341 MIR4769-201ENST00000584126 77 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 AL606834.3-201ENST00000602615 496 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 AL390123.1-201ENST00000603216 237 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 AL139022.2-201ENST00000606934 443 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 AC005520.5-201ENST00000613926 164 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 AC116165.2-201ENST00000616705 206 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 AP000943.4-201ENST00000622912 357 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 AL356596.1-201ENST00000624230 379 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 AC126544.2-201ENST00000625174 749 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 AC091948.2-201ENST00000636510 279 ntBASIC0.26□□□□□ -2.37
CXCL1P09341 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
CXCL1P09341 OR4G1P-203ENST00000641984 1631 ntBASIC0.25□□□□□ -2.37
CXCL1P09341 MTND4P5-201ENST00000435821 1374 ntBASIC0.25□□□□□ -2.37
CXCL1P09341 RNY4P16-201ENST00000364768 94 ntBASIC0.25□□□□□ -2.37
CXCL1P09341 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.25□□□□□ -2.37
CXCL1P09341 RNU2-3P-201ENST00000410144 191 ntBASIC0.25□□□□□ -2.37
CXCL1P09341 AL606662.1-201ENST00000445763 553 ntBASIC0.25□□□□□ -2.37
CXCL1P09341 RNU7-90P-201ENST00000459216 62 ntBASIC0.25□□□□□ -2.37
CXCL1P09341 AP000797.1-201ENST00000478870 387 ntBASIC0.25□□□□□ -2.37
CXCL1P09341 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.25□□□□□ -2.37
CXCL1P09341 RN7SKP12-201ENST00000516275 143 ntBASIC0.25□□□□□ -2.37
CXCL1P09341 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.25□□□□□ -2.37
CXCL1P09341 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.25□□□□□ -2.37
CXCL1P09341 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.25□□□□□ -2.37
CXCL1P09341 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.25□□□□□ -2.37
CXCL1P09341 FAM106DP-201ENST00000586416 501 ntBASIC0.25□□□□□ -2.37
CXCL1P09341 AC009994.1-201ENST00000606889 253 ntBASIC0.25□□□□□ -2.37
CXCL1P09341 AL513423.1-201ENST00000621695 132 ntBASIC0.25□□□□□ -2.37
CXCL1P09341 AC023934.1-201ENST00000574529 2389 ntBASIC0.25□□□□□ -2.37
CXCL1P09341 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.25□□□□□ -2.37
CXCL1P09341 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.25□□□□□ -2.37
CXCL1P09341 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
CXCL1P09341 SNORA33-201ENST00000363664 130 ntBASIC0.24□□□□□ -2.37
CXCL1P09341 SNORD32A-201ENST00000364805 84 ntBASIC0.24□□□□□ -2.37
CXCL1P09341 RNU6-418P-201ENST00000384035 107 ntBASIC0.24□□□□□ -2.37
CXCL1P09341 RNU6-378P-201ENST00000384324 107 ntBASIC0.24□□□□□ -2.37
CXCL1P09341 RNU6-293P-201ENST00000411259 106 ntBASIC0.24□□□□□ -2.37
CXCL1P09341 AL133396.1-201ENST00000432048 687 ntBASIC0.24□□□□□ -2.37
CXCL1P09341 USP9YP28-201ENST00000435142 589 ntBASIC0.24□□□□□ -2.37
CXCL1P09341 HMGN2P34-201ENST00000437647 269 ntBASIC0.24□□□□□ -2.37
CXCL1P09341 NFU1P2-201ENST00000448700 469 ntBASIC0.24□□□□□ -2.37
CXCL1P09341 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.24□□□□□ -2.37
CXCL1P09341 SNORA70.12-201ENST00000516084 153 ntBASIC0.24□□□□□ -2.37
CXCL1P09341 RNU6-1146P-201ENST00000516282 102 ntBASIC0.24□□□□□ -2.37
CXCL1P09341 RNU6-229P-201ENST00000516614 102 ntBASIC0.24□□□□□ -2.37
CXCL1P09341 RNU6-567P-201ENST00000516746 107 ntBASIC0.24□□□□□ -2.37
CXCL1P09341 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.24□□□□□ -2.37
CXCL1P09341 MIR4307-201ENST00000582802 84 ntBASIC0.24□□□□□ -2.37
CXCL1P09341 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.23□□□□□ -2.37
CXCL1P09341 Y_RNA.472-201ENST00000384322 102 ntBASIC0.23□□□□□ -2.37
CXCL1P09341 RNU6-692P-201ENST00000384496 107 ntBASIC0.23□□□□□ -2.37
CXCL1P09341 RNU6-1235P-201ENST00000384559 107 ntBASIC0.23□□□□□ -2.37
CXCL1P09341 SNORD41-201ENST00000386967 70 ntBASIC0.23□□□□□ -2.37
CXCL1P09341 RNA5SP109-201ENST00000391010 116 ntBASIC0.23□□□□□ -2.37
CXCL1P09341 RN7SKP200-201ENST00000410564 320 ntBASIC0.23□□□□□ -2.37
CXCL1P09341 RPEP5-201ENST00000441137 268 ntBASIC0.23□□□□□ -2.37
CXCL1P09341 RNU6-498P-201ENST00000459468 107 ntBASIC0.23□□□□□ -2.37
CXCL1P09341 RNU6-377P-201ENST00000515965 102 ntBASIC0.23□□□□□ -2.37
CXCL1P09341 SNORA31.10-201ENST00000516482 106 ntBASIC0.23□□□□□ -2.37
CXCL1P09341 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.23□□□□□ -2.37
CXCL1P09341 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.23□□□□□ -2.37
CXCL1P09341 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.23□□□□□ -2.37
CXCL1P09341 AC078795.3-201ENST00000602913 472 ntBASIC0.23□□□□□ -2.37
CXCL1P09341 Z83818.1-201ENST00000603584 150 ntBASIC0.23□□□□□ -2.37
CXCL1P09341 AC112187.2-201ENST00000604345 283 ntBASIC0.23□□□□□ -2.37
CXCL1P09341 AC121334.2-201ENST00000605387 271 ntBASIC0.23□□□□□ -2.37
CXCL1P09341 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.23□□□□□ -2.37
CXCL1P09341 AC099786.3-201ENST00000565735 1410 ntBASIC0.22□□□□□ -2.37
CXCL1P09341 SNORA63.3-201ENST00000362682 132 ntBASIC0.22□□□□□ -2.37
CXCL1P09341 RNU6-562P-201ENST00000362731 107 ntBASIC0.22□□□□□ -2.37
CXCL1P09341 RNU6-1237P-201ENST00000384777 107 ntBASIC0.22□□□□□ -2.37
CXCL1P09341 SNORA16.2-201ENST00000390991 127 ntBASIC0.22□□□□□ -2.37
CXCL1P09341 MIR1283-1-201ENST00000408494 87 ntBASIC0.22□□□□□ -2.37
CXCL1P09341 AC092423.1-201ENST00000430165 186 ntBASIC0.22□□□□□ -2.37
CXCL1P09341 HSFY7P-201ENST00000432672 318 ntBASIC0.22□□□□□ -2.37
CXCL1P09341 HSFY8P-201ENST00000437934 318 ntBASIC0.22□□□□□ -2.37
CXCL1P09341 AC233266.1-201ENST00000454518 96 ntBASIC0.22□□□□□ -2.37
CXCL1P09341 AC002350.1-201ENST00000490759 375 ntBASIC0.22□□□□□ -2.37
CXCL1P09341 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.22□□□□□ -2.37
CXCL1P09341 RNU6-1053P-201ENST00000515930 101 ntBASIC0.22□□□□□ -2.37
CXCL1P09341 AC109479.2-201ENST00000517842 174 ntBASIC0.22□□□□□ -2.37
CXCL1P09341 MTATP6P3-201ENST00000581686 676 ntBASIC0.22□□□□□ -2.37
CXCL1P09341 AC025627.3-201ENST00000582078 182 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms