Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RNU1-57P-201ENST00000384491 166 ntBASIC2.2□□□□□ -2.06
VTNP04004 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
VTNP04004 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
VTNP04004 RNU2-23P-201ENST00000410545 195 ntBASIC2.2□□□□□ -2.06
VTNP04004 Y_RNA.604-201ENST00000410574 102 ntBASIC2.2□□□□□ -2.06
VTNP04004 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.2□□□□□ -2.06
VTNP04004 AC114801.2-201ENST00000503825 781 ntBASIC2.2□□□□□ -2.06
VTNP04004 AC091874.1-201ENST00000511402 339 ntBASIC2.2□□□□□ -2.06
VTNP04004 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.2□□□□□ -2.06
VTNP04004 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.2□□□□□ -2.06
VTNP04004 RNU2-53P-201ENST00000516257 147 ntBASIC2.2□□□□□ -2.06
VTNP04004 AC105029.1-201ENST00000520250 669 ntBASIC2.2□□□□□ -2.06
VTNP04004 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.2□□□□□ -2.06
VTNP04004 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.2□□□□□ -2.06
VTNP04004 VN1R107P-201ENST00000601784 209 ntBASIC2.2□□□□□ -2.06
VTNP04004 AC018889.1-201ENST00000605372 397 ntBASIC2.2□□□□□ -2.06
VTNP04004 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VTNP04004 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.2□□□□□ -2.06
VTNP04004 ZNF720P1-201ENST00000562403 1939 ntBASIC2.19□□□□□ -2.06
VTNP04004 Y_RNA.40-201ENST00000362645 93 ntBASIC2.19□□□□□ -2.06
VTNP04004 RNU6-1059P-201ENST00000363752 98 ntBASIC2.19□□□□□ -2.06
VTNP04004 RNA5SP99-201ENST00000364020 114 ntBASIC2.19□□□□□ -2.06
VTNP04004 CYCSP48-201ENST00000417124 323 ntBASIC2.19□□□□□ -2.06
VTNP04004 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.19□□□□□ -2.06
VTNP04004 USP9YP30-201ENST00000430729 455 ntBASIC2.19□□□□□ -2.06
VTNP04004 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.19□□□□□ -2.06
VTNP04004 AC090515.1-201ENST00000465295 476 ntBASIC2.19□□□□□ -2.06
VTNP04004 RPL23AP42-201ENST00000471152 471 ntBASIC2.19□□□□□ -2.06
VTNP04004 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.19□□□□□ -2.06
VTNP04004 ACA59.1-201ENST00000515966 143 ntBASIC2.19□□□□□ -2.06
VTNP04004 RNU6-295P-201ENST00000516901 104 ntBASIC2.19□□□□□ -2.06
VTNP04004 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.19□□□□□ -2.06
VTNP04004 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.19□□□□□ -2.06
VTNP04004 MIR5089-201ENST00000580047 84 ntBASIC2.19□□□□□ -2.06
VTNP04004 MIR4273-201ENST00000582824 84 ntBASIC2.19□□□□□ -2.06
VTNP04004 RPL30P11-203ENST00000598995 310 ntBASIC2.19□□□□□ -2.06
VTNP04004 AL133215.3-201ENST00000609801 448 ntBASIC2.19□□□□□ -2.06
VTNP04004 MIR6845-201ENST00000613182 61 ntBASIC2.19□□□□□ -2.06
VTNP04004 AC009233.1-201ENST00000616477 371 ntBASIC2.19□□□□□ -2.06
VTNP04004 AC090517.3-201ENST00000625170 141 ntBASIC2.19□□□□□ -2.06
VTNP04004 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.19□□□□□ -2.06
VTNP04004 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
VTNP04004 AC002543.1-201ENST00000299783 1954 ntBASIC2.19□□□□□ -2.06
VTNP04004 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
VTNP04004 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
VTNP04004 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.18□□□□□ -2.06
VTNP04004 RNU6-655P-201ENST00000362858 107 ntBASIC2.18□□□□□ -2.06
VTNP04004 RNU6-601P-201ENST00000384540 107 ntBASIC2.18□□□□□ -2.06
VTNP04004 Y_RNA.529-201ENST00000384586 119 ntBASIC2.18□□□□□ -2.06
VTNP04004 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.18□□□□□ -2.06
VTNP04004 AP000275.1-201ENST00000411943 390 ntBASIC2.18□□□□□ -2.06
VTNP04004 EIF4EP4-201ENST00000424916 578 ntBASIC2.18□□□□□ -2.06
VTNP04004 AC008267.5-201ENST00000424928 265 ntBASIC2.18□□□□□ -2.06
VTNP04004 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.18□□□□□ -2.06
VTNP04004 AC244670.1-201ENST00000436879 112 ntBASIC2.18□□□□□ -2.06
VTNP04004 GPM6BP3-201ENST00000442797 145 ntBASIC2.18□□□□□ -2.06
VTNP04004 SNRPEP8-201ENST00000442866 260 ntBASIC2.18□□□□□ -2.06
VTNP04004 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.18□□□□□ -2.06
VTNP04004 HMGN2P23-201ENST00000456759 269 ntBASIC2.18□□□□□ -2.06
VTNP04004 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.18□□□□□ -2.06
VTNP04004 CKS1BP2-201ENST00000497342 240 ntBASIC2.18□□□□□ -2.06
VTNP04004 PTP4A1P4-201ENST00000512479 322 ntBASIC2.18□□□□□ -2.06
VTNP04004 CBX3P7-201ENST00000532876 502 ntBASIC2.18□□□□□ -2.06
VTNP04004 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.18□□□□□ -2.06
VTNP04004 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.18□□□□□ -2.06
VTNP04004 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.18□□□□□ -2.06
VTNP04004 RPS3AP23-202ENST00000574601 686 ntBASIC2.18□□□□□ -2.06
VTNP04004 CPDP1-201ENST00000579660 283 ntBASIC2.18□□□□□ -2.06
VTNP04004 AL670379.2-201ENST00000604983 252 ntBASIC2.18□□□□□ -2.06
VTNP04004 AC016727.1-205ENST00000605437 569 ntBASIC2.18□□□□□ -2.06
VTNP04004 AC025253.1-201ENST00000613623 543 ntBASIC2.18□□□□□ -2.06
VTNP04004 AC005336.3-201ENST00000623833 2679 ntBASIC2.18□□□□□ -2.06
VTNP04004 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
VTNP04004 snoU2_19.1-201ENST00000362361 80 ntBASIC2.17□□□□□ -2.06
VTNP04004 SNORD32A-201ENST00000364805 84 ntBASIC2.17□□□□□ -2.06
VTNP04004 RNA5SP160-201ENST00000364866 120 ntBASIC2.17□□□□□ -2.06
VTNP04004 Y_RNA.339-201ENST00000365325 102 ntBASIC2.17□□□□□ -2.06
VTNP04004 RNU6-1032P-201ENST00000384100 107 ntBASIC2.17□□□□□ -2.06
VTNP04004 RNU4-14P-201ENST00000410858 122 ntBASIC2.17□□□□□ -2.06
VTNP04004 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.17□□□□□ -2.06
VTNP04004 NCOR1P3-201ENST00000420479 303 ntBASIC2.17□□□□□ -2.06
VTNP04004 AL590135.1-201ENST00000422215 156 ntBASIC2.17□□□□□ -2.06
VTNP04004 AC019205.3-201ENST00000424573 156 ntBASIC2.17□□□□□ -2.06
VTNP04004 SUMO1P4-201ENST00000429430 302 ntBASIC2.17□□□□□ -2.06
VTNP04004 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.17□□□□□ -2.06
VTNP04004 AC016700.2-201ENST00000446011 156 ntBASIC2.17□□□□□ -2.06
VTNP04004 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
VTNP04004 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.17□□□□□ -2.06
VTNP04004 Y_RNA.635-201ENST00000459041 101 ntBASIC2.17□□□□□ -2.06
VTNP04004 FO393415.2-201ENST00000480085 343 ntBASIC2.17□□□□□ -2.06
VTNP04004 AC104564.1-201ENST00000493028 407 ntBASIC2.17□□□□□ -2.06
VTNP04004 AC015911.1-201ENST00000495111 156 ntBASIC2.17□□□□□ -2.06
VTNP04004 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.17□□□□□ -2.06
VTNP04004 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.17□□□□□ -2.06
VTNP04004 Y_RNA.691-201ENST00000516611 103 ntBASIC2.17□□□□□ -2.06
VTNP04004 AC110588.1-201ENST00000559699 137 ntBASIC2.17□□□□□ -2.06
VTNP04004 MIR5194-201ENST00000582634 120 ntBASIC2.17□□□□□ -2.06
VTNP04004 AC011494.1-201ENST00000596454 237 ntBASIC2.17□□□□□ -2.06
VTNP04004 MIR8076-201ENST00000611401 83 ntBASIC2.17□□□□□ -2.06
VTNP04004 PISRT1.1-201ENST00000616930 107 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms