Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RNA5SP270-201ENST00000411361 118 ntBASIC2.35□□□□□ -2.03
COL2A1P02458 RNU6-1132P-201ENST00000459214 107 ntBASIC2.35□□□□□ -2.03
COL2A1P02458 HMGN2P13-201ENST00000476476 274 ntBASIC2.35□□□□□ -2.03
COL2A1P02458 AC104435.1-201ENST00000483483 166 ntBASIC2.35□□□□□ -2.03
COL2A1P02458 AC026801.1-201ENST00000497178 464 ntBASIC2.35□□□□□ -2.03
COL2A1P02458 AC010265.1-201ENST00000513509 211 ntBASIC2.35□□□□□ -2.03
COL2A1P02458 RNA5SP182-201ENST00000516064 82 ntBASIC2.35□□□□□ -2.03
COL2A1P02458 RNU6-840P-201ENST00000517275 65 ntBASIC2.35□□□□□ -2.03
COL2A1P02458 CYCSP27-201ENST00000527643 293 ntBASIC2.35□□□□□ -2.03
COL2A1P02458 AC040926.1-201ENST00000530195 238 ntBASIC2.35□□□□□ -2.03
COL2A1P02458 AP003385.6-201ENST00000531603 374 ntBASIC2.35□□□□□ -2.03
COL2A1P02458 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.35□□□□□ -2.03
COL2A1P02458 AC006600.1-201ENST00000572529 153 ntBASIC2.35□□□□□ -2.03
COL2A1P02458 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
COL2A1P02458 AL031601.2-202ENST00000622650 282 ntBASIC2.35□□□□□ -2.03
COL2A1P02458 AC002064.3-201ENST00000623448 346 ntBASIC2.35□□□□□ -2.03
COL2A1P02458 ZNF271P-202ENST00000465539 1970 ntBASIC2.35□□□□□ -2.03
COL2A1P02458 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
COL2A1P02458 RNU6-874P-201ENST00000362390 105 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 Y_RNA.19-201ENST00000362462 99 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 RNU6-212P-201ENST00000362642 104 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 RNU6-512P-201ENST00000364438 103 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 Y_RNA.288-201ENST00000364854 92 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 RNU6-209P-201ENST00000384118 107 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 RNU6-1179P-201ENST00000384667 107 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 MIR583-201ENST00000384846 75 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 MIR1302-6-201ENST00000408466 90 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 RNA5SP56-201ENST00000410277 118 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 RNU6-847P-201ENST00000411115 108 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.34□□□□□ -2.03
COL2A1P02458 AC090774.1-201ENST00000435925 246 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 MTCO3P8-201ENST00000453691 755 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 SNORD127-201ENST00000458892 86 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 AC116655.1-201ENST00000508324 901 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 RNU6-408P-201ENST00000515910 100 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 RNU6-677P-201ENST00000516914 101 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 Y_RNA.715-201ENST00000517082 110 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 ERHP1-201ENST00000523006 310 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.34□□□□□ -2.03
COL2A1P02458 SNRPGP16-201ENST00000533275 226 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 AC023157.2-201ENST00000540596 141 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 AC007375.1-201ENST00000554513 578 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.34□□□□□ -2.03
COL2A1P02458 OR1M4P-201ENST00000589199 287 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 AC123912.5-201ENST00000605470 343 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 AC096772.1-201ENST00000609146 564 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 Y_RNA.783-201ENST00000613546 102 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 PABPC1P7-201ENST00000413177 1513 ntBASIC2.34□□□□□ -2.03
COL2A1P02458 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.03
COL2A1P02458 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
COL2A1P02458 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
COL2A1P02458 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
COL2A1P02458 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
COL2A1P02458 SNORA51.11-201ENST00000384442 131 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 Y_RNA.533-201ENST00000384596 114 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNU6-713P-201ENST00000384761 107 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 AL603908.1-201ENST00000406098 201 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 MIR1252-201ENST00000408861 65 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNU6-325P-201ENST00000411132 105 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNU4-61P-201ENST00000411243 107 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.33□□□□□ -2.04
COL2A1P02458 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.33□□□□□ -2.04
COL2A1P02458 AC011005.2-201ENST00000487324 359 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RPL17P19-201ENST00000489069 552 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.33□□□□□ -2.04
COL2A1P02458 RAC1P9-201ENST00000604990 392 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 AL121917.1-203ENST00000605534 577 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
COL2A1P02458 MIR4496-201ENST00000635896 61 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
COL2A1P02458 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
COL2A1P02458 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
COL2A1P02458 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
COL2A1P02458 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
COL2A1P02458 RNU6-661P-201ENST00000362409 107 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNU6-37P-201ENST00000362692 107 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNY1P16-201ENST00000363063 111 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 Y_RNA.105-201ENST00000363182 111 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNU6-11P-201ENST00000364234 107 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNU1-115P-201ENST00000365329 160 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNU6-25P-201ENST00000383873 107 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNU6-1-201ENST00000383898 107 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNU6-48P-201ENST00000384161 107 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNU6-36P-201ENST00000384172 107 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNU6-4P-201ENST00000384205 107 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNU6-5P-201ENST00000384238 107 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 U8.10-201ENST00000384260 133 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNU6-3P-201ENST00000384314 107 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNU6-16P-201ENST00000384385 107 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNU6-15P-201ENST00000384534 107 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNU6-2-201ENST00000384627 107 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNU6-29P-201ENST00000384637 107 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNU6-9-201ENST00000384776 107 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNU6-33P-201ENST00000384793 107 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 MIR215-201ENST00000384858 110 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 AL030996.1-201ENST00000411430 235 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RPL31P2-201ENST00000413849 377 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 CYCSP33-201ENST00000414485 327 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms