Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.18□□□□□ -2.06
GGPS1O95749 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.18□□□□□ -2.06
GGPS1O95749 TPRKBP2-201ENST00000565969 475 ntBASIC2.18□□□□□ -2.06
GGPS1O95749 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.18□□□□□ -2.06
GGPS1O95749 PCGEM1.1-201ENST00000613431 131 ntBASIC2.18□□□□□ -2.06
GGPS1O95749 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
GGPS1O95749 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
GGPS1O95749 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.17□□□□□ -2.06
GGPS1O95749 Y_RNA.9-201ENST00000362354 101 ntBASIC2.17□□□□□ -2.06
GGPS1O95749 U3.9-201ENST00000363823 204 ntBASIC2.17□□□□□ -2.06
GGPS1O95749 RNU6-1317P-201ENST00000364582 104 ntBASIC2.17□□□□□ -2.06
GGPS1O95749 Y_RNA.402-201ENST00000383972 102 ntBASIC2.17□□□□□ -2.06
GGPS1O95749 RNU6-26P-201ENST00000383985 107 ntBASIC2.17□□□□□ -2.06
GGPS1O95749 SNORA36A-201ENST00000384221 132 ntBASIC2.17□□□□□ -2.06
GGPS1O95749 AL357139.1-201ENST00000407792 426 ntBASIC2.17□□□□□ -2.06
GGPS1O95749 MIR1283-2-201ENST00000408621 87 ntBASIC2.17□□□□□ -2.06
GGPS1O95749 EIF1AXP1-201ENST00000419267 435 ntBASIC2.17□□□□□ -2.06
GGPS1O95749 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.17□□□□□ -2.06
GGPS1O95749 NDUFA5P4-201ENST00000436704 385 ntBASIC2.17□□□□□ -2.06
GGPS1O95749 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.17□□□□□ -2.06
GGPS1O95749 AC003989.2-201ENST00000440224 169 ntBASIC2.17□□□□□ -2.06
GGPS1O95749 AC114801.2-201ENST00000503825 781 ntBASIC2.17□□□□□ -2.06
GGPS1O95749 MIR449C-201ENST00000516047 92 ntBASIC2.17□□□□□ -2.06
GGPS1O95749 RNU6-991P-201ENST00000516168 107 ntBASIC2.17□□□□□ -2.06
GGPS1O95749 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.17□□□□□ -2.06
GGPS1O95749 AC016256.1-201ENST00000547971 354 ntBASIC2.17□□□□□ -2.06
GGPS1O95749 ZNF519P2-201ENST00000557032 169 ntBASIC2.17□□□□□ -2.06
GGPS1O95749 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.17□□□□□ -2.06
GGPS1O95749 AC104458.1-201ENST00000608243 463 ntBASIC2.17□□□□□ -2.06
GGPS1O95749 AC005520.5-201ENST00000613926 164 ntBASIC2.17□□□□□ -2.06
GGPS1O95749 AL162373.1-201ENST00000620433 407 ntBASIC2.17□□□□□ -2.06
GGPS1O95749 DUXAP9-208ENST00000622815 614 ntBASIC2.17□□□□□ -2.06
GGPS1O95749 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
GGPS1O95749 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
GGPS1O95749 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.17□□□□□ -2.06
GGPS1O95749 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
GGPS1O95749 RNU6-254P-201ENST00000363377 107 ntBASIC2.16□□□□□ -2.06
GGPS1O95749 RNU6-1164P-201ENST00000364428 107 ntBASIC2.16□□□□□ -2.06
GGPS1O95749 RNU6-234P-201ENST00000365229 104 ntBASIC2.16□□□□□ -2.06
GGPS1O95749 RNU6-128P-201ENST00000383976 107 ntBASIC2.16□□□□□ -2.06
GGPS1O95749 RNA5SP465-201ENST00000391195 109 ntBASIC2.16□□□□□ -2.06
GGPS1O95749 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
GGPS1O95749 MIR450B-201ENST00000401182 78 ntBASIC2.16□□□□□ -2.06
GGPS1O95749 RNU2-20P-201ENST00000410425 191 ntBASIC2.16□□□□□ -2.06
GGPS1O95749 SNRPEP10-201ENST00000420249 274 ntBASIC2.16□□□□□ -2.06
GGPS1O95749 AC096920.1-201ENST00000423991 241 ntBASIC2.16□□□□□ -2.06
GGPS1O95749 MTND3P9-201ENST00000429526 346 ntBASIC2.16□□□□□ -2.06
GGPS1O95749 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.16□□□□□ -2.06
GGPS1O95749 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.16□□□□□ -2.06
GGPS1O95749 AMD1P1-201ENST00000457220 922 ntBASIC2.16□□□□□ -2.06
GGPS1O95749 RPL23AP63-201ENST00000498752 471 ntBASIC2.16□□□□□ -2.06
GGPS1O95749 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.16□□□□□ -2.06
GGPS1O95749 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.16□□□□□ -2.06
GGPS1O95749 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.16□□□□□ -2.06
GGPS1O95749 AL136221.1-201ENST00000621449 509 ntBASIC2.16□□□□□ -2.06
GGPS1O95749 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.16□□□□□ -2.06
GGPS1O95749 ZNF72P-201ENST00000425869 1908 ntBASIC2.16□□□□□ -2.06
GGPS1O95749 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
GGPS1O95749 RNY4P14-201ENST00000363656 96 ntBASIC2.15□□□□□ -2.07
GGPS1O95749 AL512604.1-201ENST00000404812 257 ntBASIC2.15□□□□□ -2.07
GGPS1O95749 Y_RNA.615-201ENST00000410769 117 ntBASIC2.15□□□□□ -2.07
GGPS1O95749 RNU6-325P-201ENST00000411132 105 ntBASIC2.15□□□□□ -2.07
GGPS1O95749 MTCO1P21-201ENST00000416634 589 ntBASIC2.15□□□□□ -2.07
GGPS1O95749 AC012306.1-201ENST00000423267 114 ntBASIC2.15□□□□□ -2.07
GGPS1O95749 MTND2P29-201ENST00000438595 412 ntBASIC2.15□□□□□ -2.07
GGPS1O95749 AC007547.1-201ENST00000462177 490 ntBASIC2.15□□□□□ -2.07
GGPS1O95749 MTCO1P29-201ENST00000496868 288 ntBASIC2.15□□□□□ -2.07
GGPS1O95749 AC021146.2-201ENST00000504736 556 ntBASIC2.15□□□□□ -2.07
GGPS1O95749 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.15□□□□□ -2.07
GGPS1O95749 EIF4A1P12-201ENST00000551910 141 ntBASIC2.15□□□□□ -2.07
GGPS1O95749 AC109446.1-201ENST00000566172 220 ntBASIC2.15□□□□□ -2.07
GGPS1O95749 MIR3935-201ENST00000583472 104 ntBASIC2.15□□□□□ -2.07
GGPS1O95749 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.15□□□□□ -2.07
GGPS1O95749 U4.5-201ENST00000617137 123 ntBASIC2.15□□□□□ -2.07
GGPS1O95749 SDR42E1P4-201ENST00000620894 481 ntBASIC2.15□□□□□ -2.07
GGPS1O95749 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
GGPS1O95749 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
GGPS1O95749 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.15□□□□□ -2.07
GGPS1O95749 AC008555.8-201ENST00000623602 2168 ntBASIC2.15□□□□□ -2.07
GGPS1O95749 ZNF702P-202ENST00000434269 1966 ntBASIC2.14□□□□□ -2.07
GGPS1O95749 SNORD113-7-201ENST00000363762 77 ntBASIC2.14□□□□□ -2.07
GGPS1O95749 Y_RNA.373-201ENST00000365600 103 ntBASIC2.14□□□□□ -2.07
GGPS1O95749 RNU6-378P-201ENST00000384324 107 ntBASIC2.14□□□□□ -2.07
GGPS1O95749 Y_RNA.516-201ENST00000384541 124 ntBASIC2.14□□□□□ -2.07
GGPS1O95749 Y_RNA.530-201ENST00000384587 101 ntBASIC2.14□□□□□ -2.07
GGPS1O95749 Y_RNA.554-201ENST00000384672 102 ntBASIC2.14□□□□□ -2.07
GGPS1O95749 AL030996.1-201ENST00000411430 235 ntBASIC2.14□□□□□ -2.07
GGPS1O95749 BX510359.4-201ENST00000423750 193 ntBASIC2.14□□□□□ -2.07
GGPS1O95749 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.14□□□□□ -2.07
GGPS1O95749 RNA5SP233-201ENST00000459153 113 ntBASIC2.14□□□□□ -2.07
GGPS1O95749 TRBVA-201ENST00000498804 316 ntBASIC2.14□□□□□ -2.07
GGPS1O95749 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.14□□□□□ -2.07
GGPS1O95749 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.14□□□□□ -2.07
GGPS1O95749 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.14□□□□□ -2.07
GGPS1O95749 Y_RNA.655-201ENST00000515919 96 ntBASIC2.14□□□□□ -2.07
GGPS1O95749 RNA5SP490-201ENST00000517141 136 ntBASIC2.14□□□□□ -2.07
GGPS1O95749 MTND1P5-201ENST00000517906 940 ntBASIC2.14□□□□□ -2.07
GGPS1O95749 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.14□□□□□ -2.07
GGPS1O95749 MTND1P35-201ENST00000526739 508 ntBASIC2.14□□□□□ -2.07
GGPS1O95749 AC026371.1-201ENST00000551867 419 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms