Protein–RNA interactions for Protein: O75556

SCGB2A1, Mammaglobin-B, humanhuman

Predictions only

Length 95 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB2A1O75556 AC025423.5-201ENST00000550230 219 ntBASIC1.53□□□□□ -2.16
SCGB2A1O75556 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.53□□□□□ -2.16
SCGB2A1O75556 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.53□□□□□ -2.16
SCGB2A1O75556 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.53□□□□□ -2.16
SCGB2A1O75556 MIR5002-201ENST00000584713 97 ntBASIC1.53□□□□□ -2.16
SCGB2A1O75556 MIR5692C1-201ENST00000585309 91 ntBASIC1.53□□□□□ -2.16
SCGB2A1O75556 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.53□□□□□ -2.17
SCGB2A1O75556 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SCGB2A1O75556 AC010615.1-201ENST00000594254 1764 ntBASIC1.52□□□□□ -2.17
SCGB2A1O75556 RNU6-545P-201ENST00000362681 104 ntBASIC1.52□□□□□ -2.17
SCGB2A1O75556 RNU6-1322P-201ENST00000364309 107 ntBASIC1.52□□□□□ -2.17
SCGB2A1O75556 Y_RNA.378-201ENST00000365652 113 ntBASIC1.52□□□□□ -2.17
SCGB2A1O75556 RNU1-78P-201ENST00000391248 165 ntBASIC1.52□□□□□ -2.17
SCGB2A1O75556 DEFB108C-201ENST00000400154 252 ntBASIC1.52□□□□□ -2.17
SCGB2A1O75556 RNA5SP338-201ENST00000410495 85 ntBASIC1.52□□□□□ -2.17
SCGB2A1O75556 EBAG9P1-201ENST00000418955 543 ntBASIC1.52□□□□□ -2.17
SCGB2A1O75556 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.52□□□□□ -2.17
SCGB2A1O75556 MTCO2P16-201ENST00000436962 677 ntBASIC1.52□□□□□ -2.17
SCGB2A1O75556 HSPE1P9-201ENST00000440046 311 ntBASIC1.52□□□□□ -2.17
SCGB2A1O75556 JTBP1-201ENST00000441314 247 ntBASIC1.52□□□□□ -2.17
SCGB2A1O75556 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.52□□□□□ -2.17
SCGB2A1O75556 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.52□□□□□ -2.17
SCGB2A1O75556 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.52□□□□□ -2.17
SCGB2A1O75556 Y_RNA.654-201ENST00000497848 106 ntBASIC1.52□□□□□ -2.17
SCGB2A1O75556 AC091885.1-201ENST00000506658 268 ntBASIC1.52□□□□□ -2.17
SCGB2A1O75556 RNU6-970P-201ENST00000516312 107 ntBASIC1.52□□□□□ -2.17
SCGB2A1O75556 IGKV3-31-201ENST00000523109 329 ntBASIC1.52□□□□□ -2.17
SCGB2A1O75556 AC104576.1-201ENST00000524225 88 ntBASIC1.52□□□□□ -2.17
SCGB2A1O75556 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.52□□□□□ -2.17
SCGB2A1O75556 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.52□□□□□ -2.17
SCGB2A1O75556 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.52□□□□□ -2.17
SCGB2A1O75556 AC026470.2-201ENST00000561492 181 ntBASIC1.52□□□□□ -2.17
SCGB2A1O75556 HMGB1P33-201ENST00000563485 527 ntBASIC1.52□□□□□ -2.17
SCGB2A1O75556 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.52□□□□□ -2.17
SCGB2A1O75556 MIR3618-201ENST00000580330 88 ntBASIC1.52□□□□□ -2.17
SCGB2A1O75556 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.52□□□□□ -2.17
SCGB2A1O75556 AL357078.3-201ENST00000607528 618 ntBASIC1.52□□□□□ -2.17
SCGB2A1O75556 AC005562.2-201ENST00000618264 111 ntBASIC1.52□□□□□ -2.17
SCGB2A1O75556 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.52□□□□□ -2.17
SCGB2A1O75556 Y_RNA.67-201ENST00000362870 100 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 SNORA63D-201ENST00000364359 132 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 RNU6-1019P-201ENST00000364424 107 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 RNU6-1317P-201ENST00000364582 104 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 RNU4-66P-201ENST00000365199 138 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 RNU4-20P-201ENST00000365601 151 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 RNU6-877P-201ENST00000383868 107 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 RNU6-1286P-201ENST00000383871 107 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 RNU6-997P-201ENST00000384725 107 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
SCGB2A1O75556 AL117342.1-201ENST00000404861 406 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 SUMO2P12-201ENST00000405924 140 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 MIR1283-1-201ENST00000408494 87 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.51□□□□□ -2.17
SCGB2A1O75556 AL359672.1-201ENST00000442302 409 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.51□□□□□ -2.17
SCGB2A1O75556 SNORA19.2-201ENST00000516013 114 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 RNU2-34P-201ENST00000516534 121 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 RNA5SP437-201ENST00000517249 129 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.51□□□□□ -2.17
SCGB2A1O75556 AC024614.2-201ENST00000577584 372 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.51□□□□□ -2.17
SCGB2A1O75556 AP005136.1-201ENST00000579765 429 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 AL353149.1-201ENST00000610667 244 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 AL121757.2-201ENST00000611223 313 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 Y_RNA.783-201ENST00000613546 102 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 AL590808.1-201ENST00000618696 141 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 AC064859.1-201ENST00000624741 174 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 MTND5P6-201ENST00000422338 1798 ntBASIC1.51□□□□□ -2.17
SCGB2A1O75556 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SCGB2A1O75556 RNU4-82P-201ENST00000362443 140 ntBASIC1.5□□□□□ -2.17
SCGB2A1O75556 SNORA69-201ENST00000383895 132 ntBASIC1.5□□□□□ -2.17
SCGB2A1O75556 RNU6-1119P-201ENST00000384349 108 ntBASIC1.5□□□□□ -2.17
SCGB2A1O75556 RNY3P9-201ENST00000384727 106 ntBASIC1.5□□□□□ -2.17
SCGB2A1O75556 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.5□□□□□ -2.17
SCGB2A1O75556 AF228730.1-201ENST00000397972 663 ntBASIC1.5□□□□□ -2.17
SCGB2A1O75556 RN7SKP32-201ENST00000410167 303 ntBASIC1.5□□□□□ -2.17
SCGB2A1O75556 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.5□□□□□ -2.17
SCGB2A1O75556 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.5□□□□□ -2.17
SCGB2A1O75556 FTH1P12-201ENST00000432137 551 ntBASIC1.5□□□□□ -2.17
SCGB2A1O75556 RPL7P54-201ENST00000438336 674 ntBASIC1.5□□□□□ -2.17
SCGB2A1O75556 AC245517.4-201ENST00000448601 281 ntBASIC1.5□□□□□ -2.17
SCGB2A1O75556 snoU13.30-201ENST00000458951 104 ntBASIC1.5□□□□□ -2.17
SCGB2A1O75556 RNU6-1208P-201ENST00000459588 107 ntBASIC1.5□□□□□ -2.17
SCGB2A1O75556 HMGN2P9-201ENST00000476875 229 ntBASIC1.5□□□□□ -2.17
SCGB2A1O75556 RPL36AP21-201ENST00000490372 323 ntBASIC1.5□□□□□ -2.17
SCGB2A1O75556 AC091435.1-201ENST00000505442 584 ntBASIC1.5□□□□□ -2.17
SCGB2A1O75556 AC026407.1-201ENST00000518369 204 ntBASIC1.5□□□□□ -2.17
SCGB2A1O75556 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.5□□□□□ -2.17
SCGB2A1O75556 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.5□□□□□ -2.17
SCGB2A1O75556 AL157687.1-201ENST00000554853 619 ntBASIC1.5□□□□□ -2.17
SCGB2A1O75556 SNORA59B-202ENST00000578183 701 ntBASIC1.5□□□□□ -2.17
SCGB2A1O75556 AC016727.2-201ENST00000603988 621 ntBASIC1.5□□□□□ -2.17
SCGB2A1O75556 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SCGB2A1O75556 AL359697.1-201ENST00000624879 587 ntBASIC1.5□□□□□ -2.17
SCGB2A1O75556 FER-210ENST00000628534 558 ntTSL 5 BASIC1.5□□□□□ -2.17
SCGB2A1O75556 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
SCGB2A1O75556 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
SCGB2A1O75556 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms