Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SEPT14P4-201ENST00000513445 186 ntBASIC1.72□□□□□ -2.13
TRIM3O75382 RNU6-506P-201ENST00000516553 94 ntBASIC1.72□□□□□ -2.13
TRIM3O75382 SNORD60.2-201ENST00000516883 86 ntBASIC1.72□□□□□ -2.13
TRIM3O75382 RNU6-612P-201ENST00000516909 102 ntBASIC1.72□□□□□ -2.13
TRIM3O75382 FO082796.1-201ENST00000523795 183 ntBASIC1.72□□□□□ -2.13
TRIM3O75382 HMGB1P33-201ENST00000563485 527 ntBASIC1.72□□□□□ -2.13
TRIM3O75382 MIR3923-201ENST00000579521 83 ntBASIC1.72□□□□□ -2.13
TRIM3O75382 MIR4713-201ENST00000582691 75 ntBASIC1.72□□□□□ -2.13
TRIM3O75382 AC010525.2-201ENST00000590920 195 ntBASIC1.72□□□□□ -2.13
TRIM3O75382 AL162413.1-201ENST00000603198 110 ntBASIC1.72□□□□□ -2.13
TRIM3O75382 AL356157.2-201ENST00000605122 111 ntBASIC1.72□□□□□ -2.13
TRIM3O75382 AP000654.2-201ENST00000605633 586 ntBASIC1.72□□□□□ -2.13
TRIM3O75382 MIR6845-201ENST00000613182 61 ntBASIC1.72□□□□□ -2.13
TRIM3O75382 SNORA43.4-201ENST00000629559 138 ntBASIC1.72□□□□□ -2.13
TRIM3O75382 AC099654.12-201ENST00000639868 649 ntBASIC1.72□□□□□ -2.13
TRIM3O75382 AC009541.1-201ENST00000438279 2662 ntBASIC1.72□□□□□ -2.13
TRIM3O75382 MTND4P23-201ENST00000447723 1363 ntBASIC1.72□□□□□ -2.13
TRIM3O75382 AC092268.1-201ENST00000342691 405 ntBASIC1.71□□□□□ -2.14
TRIM3O75382 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
TRIM3O75382 RNU6-1164P-201ENST00000364428 107 ntBASIC1.71□□□□□ -2.14
TRIM3O75382 RNU6-378P-201ENST00000384324 107 ntBASIC1.71□□□□□ -2.14
TRIM3O75382 RNU11-3P-201ENST00000391111 133 ntBASIC1.71□□□□□ -2.14
TRIM3O75382 AL590002.1-201ENST00000406554 418 ntBASIC1.71□□□□□ -2.14
TRIM3O75382 SRIP3-201ENST00000413200 219 ntBASIC1.71□□□□□ -2.14
TRIM3O75382 MTND3P9-201ENST00000429526 346 ntBASIC1.71□□□□□ -2.14
TRIM3O75382 MRPS10P2-201ENST00000431226 381 ntBASIC1.71□□□□□ -2.14
TRIM3O75382 AC007677.1-201ENST00000445757 515 ntBASIC1.71□□□□□ -2.14
TRIM3O75382 AC245102.2-201ENST00000448956 180 ntBASIC1.71□□□□□ -2.14
TRIM3O75382 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.71□□□□□ -2.14
TRIM3O75382 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.71□□□□□ -2.14
TRIM3O75382 snoU13.23-201ENST00000458863 104 ntBASIC1.71□□□□□ -2.14
TRIM3O75382 RPL9P9-202ENST00000466501 579 ntBASIC1.71□□□□□ -2.14
TRIM3O75382 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.71□□□□□ -2.14
TRIM3O75382 AC008628.2-201ENST00000502605 298 ntBASIC1.71□□□□□ -2.14
TRIM3O75382 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.71□□□□□ -2.14
TRIM3O75382 AC092436.3-201ENST00000511788 257 ntBASIC1.71□□□□□ -2.14
TRIM3O75382 AC025465.4-201ENST00000513422 638 ntBASIC1.71□□□□□ -2.14
TRIM3O75382 RNU6-1332P-201ENST00000516666 104 ntBASIC1.71□□□□□ -2.14
TRIM3O75382 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.71□□□□□ -2.14
TRIM3O75382 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.71□□□□□ -2.14
TRIM3O75382 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.71□□□□□ -2.14
TRIM3O75382 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.71□□□□□ -2.14
TRIM3O75382 Z98751.3-201ENST00000604447 521 ntBASIC1.71□□□□□ -2.14
TRIM3O75382 RNU6-89P-201ENST00000606519 100 ntBASIC1.71□□□□□ -2.14
TRIM3O75382 PCGEM1.1-201ENST00000613431 131 ntBASIC1.71□□□□□ -2.14
TRIM3O75382 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.71□□□□□ -2.14
TRIM3O75382 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.71□□□□□ -2.14
TRIM3O75382 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.71□□□□□ -2.14
TRIM3O75382 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
TRIM3O75382 Y_RNA.38-201ENST00000362617 102 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 RNU6-1090P-201ENST00000364065 94 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 RNU6-1317P-201ENST00000364582 104 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 Y_RNA.373-201ENST00000365600 103 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 RNU6-26P-201ENST00000383985 107 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 MIR29C-201ENST00000385231 88 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 SNORA26.3-201ENST00000391119 136 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 RNA5SP465-201ENST00000391195 109 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 SNORA40.18-201ENST00000391200 128 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 EIF4E2P1-201ENST00000393781 255 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 MTCYBP2-201ENST00000407745 171 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 RNA5SP201-201ENST00000410316 124 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 Y_RNA.615-201ENST00000410769 117 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.7□□□□□ -2.14
TRIM3O75382 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.7□□□□□ -2.14
TRIM3O75382 AL591806.2-201ENST00000433122 173 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 ERLEC1P1-201ENST00000433806 578 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 AC003989.2-201ENST00000440224 169 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 AL359672.1-201ENST00000442302 409 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 MTCO2P7-201ENST00000446518 666 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 AMD1P1-201ENST00000457220 922 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 AC107393.1-201ENST00000512403 346 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 AL157687.1-201ENST00000554853 619 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 HSBP1P1-201ENST00000555205 166 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 AC011494.1-201ENST00000596454 237 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 FAM157A-202ENST00000615155 405 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 AC015540.1-201ENST00000615828 501 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 AC068137.3-201ENST00000639191 341 ntBASIC1.7□□□□□ -2.14
TRIM3O75382 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
TRIM3O75382 RNU4-40P-201ENST00000364351 143 ntBASIC1.69□□□□□ -2.14
TRIM3O75382 RNU6-522P-201ENST00000364497 107 ntBASIC1.69□□□□□ -2.14
TRIM3O75382 RNU4-42P-201ENST00000364738 142 ntBASIC1.69□□□□□ -2.14
TRIM3O75382 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
TRIM3O75382 MIR764-201ENST00000390811 85 ntBASIC1.69□□□□□ -2.14
TRIM3O75382 MIR450B-201ENST00000401182 78 ntBASIC1.69□□□□□ -2.14
TRIM3O75382 RNU6-908P-201ENST00000410160 94 ntBASIC1.69□□□□□ -2.14
TRIM3O75382 RPS20P15-201ENST00000412792 311 ntBASIC1.69□□□□□ -2.14
TRIM3O75382 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
TRIM3O75382 ARL5AP1-201ENST00000418991 388 ntBASIC1.69□□□□□ -2.14
TRIM3O75382 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.69□□□□□ -2.14
TRIM3O75382 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.69□□□□□ -2.14
TRIM3O75382 HMGN2P18-201ENST00000450680 270 ntBASIC1.69□□□□□ -2.14
TRIM3O75382 RPS29P27-201ENST00000463711 170 ntBASIC1.69□□□□□ -2.14
TRIM3O75382 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.69□□□□□ -2.14
TRIM3O75382 AC104564.1-201ENST00000493028 407 ntBASIC1.69□□□□□ -2.14
TRIM3O75382 AC021146.2-201ENST00000504736 556 ntBASIC1.69□□□□□ -2.14
TRIM3O75382 RNA5SP490-201ENST00000517141 136 ntBASIC1.69□□□□□ -2.14
TRIM3O75382 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.69□□□□□ -2.14
TRIM3O75382 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.69□□□□□ -2.14
TRIM3O75382 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms