Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
VAMP4O75379 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.75□□□□□ -1.81
VAMP4O75379 AC000403.1-201ENST00000613696 3585 ntBASIC3.75□□□□□ -1.81
VAMP4O75379 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VAMP4O75379 Y_RNA.237-201ENST00000364439 102 ntBASIC3.75□□□□□ -1.81
VAMP4O75379 Y_RNA.352-201ENST00000365439 102 ntBASIC3.75□□□□□ -1.81
VAMP4O75379 U8.10-201ENST00000384260 133 ntBASIC3.75□□□□□ -1.81
VAMP4O75379 SNORD63-201ENST00000384262 68 ntBASIC3.75□□□□□ -1.81
VAMP4O75379 RNU6-318P-201ENST00000384283 103 ntBASIC3.75□□□□□ -1.81
VAMP4O75379 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.75□□□□□ -1.81
VAMP4O75379 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.75□□□□□ -1.81
VAMP4O75379 RPS15AP7-201ENST00000439294 405 ntBASIC3.75□□□□□ -1.81
VAMP4O75379 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.75□□□□□ -1.81
VAMP4O75379 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.75□□□□□ -1.81
VAMP4O75379 AP000870.1-201ENST00000472927 406 ntBASIC3.75□□□□□ -1.81
VAMP4O75379 RPL30P14-201ENST00000482744 348 ntBASIC3.75□□□□□ -1.81
VAMP4O75379 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.75□□□□□ -1.81
VAMP4O75379 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.75□□□□□ -1.81
VAMP4O75379 RNU6-1338P-201ENST00000516328 91 ntBASIC3.75□□□□□ -1.81
VAMP4O75379 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.75□□□□□ -1.81
VAMP4O75379 RNU6-111P-201ENST00000517179 105 ntBASIC3.75□□□□□ -1.81
VAMP4O75379 AC022080.3-201ENST00000544433 482 ntBASIC3.75□□□□□ -1.81
VAMP4O75379 HSPE1P4-201ENST00000550617 308 ntBASIC3.75□□□□□ -1.81
VAMP4O75379 AL109918.3-201ENST00000603072 338 ntBASIC3.75□□□□□ -1.81
VAMP4O75379 AC093732.2-201ENST00000607950 274 ntBASIC3.75□□□□□ -1.81
VAMP4O75379 AC073308.1-201ENST00000623696 305 ntBASIC3.75□□□□□ -1.81
VAMP4O75379 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
VAMP4O75379 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
VAMP4O75379 ADAM3A-203ENST00000461344 2157 ntBASIC3.75□□□□□ -1.81
VAMP4O75379 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VAMP4O75379 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VAMP4O75379 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
VAMP4O75379 AC092268.1-201ENST00000342691 405 ntBASIC3.74□□□□□ -1.81
VAMP4O75379 Y_RNA.504-201ENST00000384481 104 ntBASIC3.74□□□□□ -1.81
VAMP4O75379 EEF1A1P41-201ENST00000414667 207 ntBASIC3.74□□□□□ -1.81
VAMP4O75379 GPM6BP3-201ENST00000442797 145 ntBASIC3.74□□□□□ -1.81
VAMP4O75379 AC096638.1-201ENST00000444678 216 ntBASIC3.74□□□□□ -1.81
VAMP4O75379 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.74□□□□□ -1.81
VAMP4O75379 HMGB1P35-201ENST00000503360 598 ntBASIC3.74□□□□□ -1.81
VAMP4O75379 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.74□□□□□ -1.81
VAMP4O75379 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.74□□□□□ -1.81
VAMP4O75379 AC006199.1-201ENST00000548728 219 ntBASIC3.74□□□□□ -1.81
VAMP4O75379 AC027288.2-201ENST00000553028 243 ntBASIC3.74□□□□□ -1.81
VAMP4O75379 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.74□□□□□ -1.81
VAMP4O75379 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
VAMP4O75379 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.74□□□□□ -1.81
VAMP4O75379 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.74□□□□□ -1.81
VAMP4O75379 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.74□□□□□ -1.81
VAMP4O75379 AC096644.4-201ENST00000563417 2912 ntBASIC3.74□□□□□ -1.81
VAMP4O75379 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VAMP4O75379 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VAMP4O75379 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
VAMP4O75379 RNU6-1159P-201ENST00000362933 107 ntBASIC3.73□□□□□ -1.81
VAMP4O75379 RNU6-1285P-201ENST00000363480 105 ntBASIC3.73□□□□□ -1.81
VAMP4O75379 SNORD115-8-201ENST00000363856 82 ntBASIC3.73□□□□□ -1.81
VAMP4O75379 SNORD115-38-201ENST00000365037 82 ntBASIC3.73□□□□□ -1.81
VAMP4O75379 Y_RNA.462-201ENST00000384268 102 ntBASIC3.73□□□□□ -1.81
VAMP4O75379 RNU6-622P-201ENST00000384272 103 ntBASIC3.73□□□□□ -1.81
VAMP4O75379 RNU6-541P-201ENST00000384709 110 ntBASIC3.73□□□□□ -1.81
VAMP4O75379 RPS29P6-201ENST00000438196 145 ntBASIC3.73□□□□□ -1.81
VAMP4O75379 AC091179.1-201ENST00000461606 579 ntBASIC3.73□□□□□ -1.81
VAMP4O75379 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.73□□□□□ -1.81
VAMP4O75379 HMGB3P17-201ENST00000504195 649 ntBASIC3.73□□□□□ -1.81
VAMP4O75379 RNU5F-8P-201ENST00000515941 111 ntBASIC3.73□□□□□ -1.81
VAMP4O75379 RN7SKP49-201ENST00000516675 260 ntBASIC3.73□□□□□ -1.81
VAMP4O75379 AC021231.3-201ENST00000558497 370 ntBASIC3.73□□□□□ -1.81
VAMP4O75379 AC023824.2-201ENST00000566185 400 ntBASIC3.73□□□□□ -1.81
VAMP4O75379 AL138963.2-201ENST00000605137 226 ntBASIC3.73□□□□□ -1.81
VAMP4O75379 MIR3199-2-201ENST00000636243 86 ntBASIC3.73□□□□□ -1.81
VAMP4O75379 AL450472.1-202ENST00000637286 180 ntBASIC3.73□□□□□ -1.81
VAMP4O75379 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.73□□□□□ -1.81
VAMP4O75379 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VAMP4O75379 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VAMP4O75379 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
VAMP4O75379 RNU1-35P-201ENST00000362782 153 ntBASIC3.72□□□□□ -1.81
VAMP4O75379 RNU6-879P-201ENST00000364328 108 ntBASIC3.72□□□□□ -1.81
VAMP4O75379 RNU6-200P-201ENST00000364743 107 ntBASIC3.72□□□□□ -1.81
VAMP4O75379 RNU6-281P-201ENST00000384212 103 ntBASIC3.72□□□□□ -1.81
VAMP4O75379 Y_RNA.539-201ENST00000384635 107 ntBASIC3.72□□□□□ -1.81
VAMP4O75379 RNU6-159P-201ENST00000391080 106 ntBASIC3.72□□□□□ -1.81
VAMP4O75379 AL358075.3-201ENST00000426289 226 ntBASIC3.72□□□□□ -1.81
VAMP4O75379 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.72□□□□□ -1.81
VAMP4O75379 AC244670.1-201ENST00000436879 112 ntBASIC3.72□□□□□ -1.81
VAMP4O75379 AL714022.1-201ENST00000439897 151 ntBASIC3.72□□□□□ -1.81
VAMP4O75379 AC012308.1-201ENST00000451232 178 ntBASIC3.72□□□□□ -1.81
VAMP4O75379 SCGB1D5P-201ENST00000515134 247 ntBASIC3.72□□□□□ -1.81
VAMP4O75379 RNU5B-3P-201ENST00000516601 115 ntBASIC3.72□□□□□ -1.81
VAMP4O75379 ACA59.2-201ENST00000517061 156 ntBASIC3.72□□□□□ -1.81
VAMP4O75379 RNU6-58P-201ENST00000517143 103 ntBASIC3.72□□□□□ -1.81
VAMP4O75379 DEFB108E-201ENST00000524692 240 ntBASIC3.72□□□□□ -1.81
VAMP4O75379 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.72□□□□□ -1.81
VAMP4O75379 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.72□□□□□ -1.81
VAMP4O75379 AL138880.2-201ENST00000616214 239 ntBASIC3.72□□□□□ -1.81
VAMP4O75379 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.72□□□□□ -1.81
VAMP4O75379 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
VAMP4O75379 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
VAMP4O75379 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
VAMP4O75379 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.71□□□□□ -1.82
VAMP4O75379 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.71□□□□□ -1.82
VAMP4O75379 SNORD113-8-201ENST00000363497 74 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms