Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RPL21P16-201ENST00000495531 483 ntBASIC2.42□□□□□ -2.02
ZIC3O60481 Y_RNA.661-201ENST00000516003 99 ntBASIC2.42□□□□□ -2.02
ZIC3O60481 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.42□□□□□ -2.02
ZIC3O60481 AP003072.1-201ENST00000531740 145 ntBASIC2.42□□□□□ -2.02
ZIC3O60481 AC007536.1-201ENST00000533382 349 ntBASIC2.42□□□□□ -2.02
ZIC3O60481 AL442663.2-201ENST00000554385 511 ntBASIC2.42□□□□□ -2.02
ZIC3O60481 AC027176.1-201ENST00000560204 514 ntBASIC2.42□□□□□ -2.02
ZIC3O60481 RPL30P11-203ENST00000598995 310 ntBASIC2.42□□□□□ -2.02
ZIC3O60481 7SK.7-201ENST00000603504 247 ntBASIC2.42□□□□□ -2.02
ZIC3O60481 RMST_6.1-201ENST00000611980 203 ntBASIC2.42□□□□□ -2.02
ZIC3O60481 MIR1244-1-201ENST00000612829 85 ntBASIC2.42□□□□□ -2.02
ZIC3O60481 MIR1244-3-201ENST00000635744 85 ntBASIC2.42□□□□□ -2.02
ZIC3O60481 MIR1244-2-201ENST00000636449 85 ntBASIC2.42□□□□□ -2.02
ZIC3O60481 MIR1244-4-202ENST00000636813 85 ntBASIC2.42□□□□□ -2.02
ZIC3O60481 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
ZIC3O60481 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.42□□□□□ -2.02
ZIC3O60481 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.42□□□□□ -2.02
ZIC3O60481 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.42□□□□□ -2.02
ZIC3O60481 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.42□□□□□ -2.02
ZIC3O60481 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
ZIC3O60481 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
ZIC3O60481 RNU4-15P-201ENST00000362613 141 ntBASIC2.41□□□□□ -2.02
ZIC3O60481 SNORD56.5-201ENST00000364281 72 ntBASIC2.41□□□□□ -2.02
ZIC3O60481 RNU1-115P-201ENST00000365329 160 ntBASIC2.41□□□□□ -2.02
ZIC3O60481 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
ZIC3O60481 SNORA22B-201ENST00000383876 138 ntBASIC2.41□□□□□ -2.02
ZIC3O60481 RNY1P14-201ENST00000384426 108 ntBASIC2.41□□□□□ -2.02
ZIC3O60481 MIR218-1-201ENST00000384999 110 ntBASIC2.41□□□□□ -2.02
ZIC3O60481 MIR190B-201ENST00000401119 79 ntBASIC2.41□□□□□ -2.02
ZIC3O60481 AL590004.2-201ENST00000404787 371 ntBASIC2.41□□□□□ -2.02
ZIC3O60481 RPS26P42-201ENST00000413485 326 ntBASIC2.41□□□□□ -2.02
ZIC3O60481 MCFD2P1-201ENST00000417812 300 ntBASIC2.41□□□□□ -2.02
ZIC3O60481 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.41□□□□□ -2.02
ZIC3O60481 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.41□□□□□ -2.02
ZIC3O60481 MTND4P19-201ENST00000446659 478 ntBASIC2.41□□□□□ -2.02
ZIC3O60481 OR2AQ1P-201ENST00000451972 200 ntBASIC2.41□□□□□ -2.02
ZIC3O60481 GSTA11P-201ENST00000452866 669 ntBASIC2.41□□□□□ -2.02
ZIC3O60481 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.41□□□□□ -2.02
ZIC3O60481 RN7SKP295-201ENST00000517264 153 ntBASIC2.41□□□□□ -2.02
ZIC3O60481 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.41□□□□□ -2.02
ZIC3O60481 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.41□□□□□ -2.02
ZIC3O60481 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.41□□□□□ -2.02
ZIC3O60481 CYP4A27P-201ENST00000567218 190 ntBASIC2.41□□□□□ -2.02
ZIC3O60481 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.41□□□□□ -2.02
ZIC3O60481 MIR3923-201ENST00000579521 83 ntBASIC2.41□□□□□ -2.02
ZIC3O60481 MIR3199-1-201ENST00000582434 88 ntBASIC2.41□□□□□ -2.02
ZIC3O60481 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.41□□□□□ -2.02
ZIC3O60481 AL355802.3-201ENST00000607571 545 ntBASIC2.41□□□□□ -2.02
ZIC3O60481 AC100812.1-201ENST00000607622 580 ntBASIC2.41□□□□□ -2.02
ZIC3O60481 AC005520.5-201ENST00000613926 164 ntBASIC2.41□□□□□ -2.02
ZIC3O60481 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.41□□□□□ -2.02
ZIC3O60481 AC087588.2-201ENST00000617667 426 ntBASIC2.41□□□□□ -2.02
ZIC3O60481 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.41□□□□□ -2.02
ZIC3O60481 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
ZIC3O60481 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.41□□□□□ -2.02
ZIC3O60481 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
ZIC3O60481 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.4□□□□□ -2.02
ZIC3O60481 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
ZIC3O60481 MTND4P27-201ENST00000450813 1354 ntBASIC2.4□□□□□ -2.02
ZIC3O60481 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.4□□□□□ -2.03
ZIC3O60481 RNU6-859P-201ENST00000362728 107 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 SNORA63-201ENST00000363450 132 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 RNU6-461P-201ENST00000364195 107 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 RNU4-56P-201ENST00000364700 142 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 MIR32-201ENST00000384965 70 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 RNA5SP201-201ENST00000410316 124 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.4□□□□□ -2.03
ZIC3O60481 AL513477.1-202ENST00000417061 214 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 AC007098.1-201ENST00000420122 367 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.4□□□□□ -2.03
ZIC3O60481 AC092423.1-201ENST00000430165 186 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.4□□□□□ -2.03
ZIC3O60481 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.4□□□□□ -2.03
ZIC3O60481 UBBP3-201ENST00000445497 241 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.4□□□□□ -2.03
ZIC3O60481 AC080013.2-201ENST00000460866 323 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 AC073901.1-201ENST00000462471 408 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 TOMM22P6-201ENST00000465035 409 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 AC140059.1-201ENST00000489238 361 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 AC096725.1-201ENST00000514266 313 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.4□□□□□ -2.03
ZIC3O60481 COX6CP5-201ENST00000527162 228 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 MIR3162-201ENST00000581818 82 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 AC105245.1-201ENST00000581934 244 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 AC022432.1-201ENST00000595739 310 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 AC006023.1-201ENST00000603944 259 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 AC007485.1-201ENST00000616755 206 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 AC137590.2-201ENST00000619709 240 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 MIR6852-201ENST00000621699 66 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 AC138305.3-201ENST00000624988 240 ntBASIC2.4□□□□□ -2.03
ZIC3O60481 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.4□□□□□ -2.03
ZIC3O60481 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
ZIC3O60481 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
ZIC3O60481 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
ZIC3O60481 snoU2_19.1-201ENST00000362361 80 ntBASIC2.39□□□□□ -2.03
ZIC3O60481 Y_RNA.148-201ENST00000363557 117 ntBASIC2.39□□□□□ -2.03
ZIC3O60481 Y_RNA.202-201ENST00000364083 110 ntBASIC2.39□□□□□ -2.03
ZIC3O60481 RNU4-42P-201ENST00000364738 142 ntBASIC2.39□□□□□ -2.03
ZIC3O60481 Y_RNA.314-201ENST00000365114 102 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms