Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RPS23P5-201ENST00000495419 428 ntBASIC3.35□□□□□ -1.87
FOXN1O15353 RPL21P16-201ENST00000495531 483 ntBASIC3.35□□□□□ -1.87
FOXN1O15353 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.35□□□□□ -1.87
FOXN1O15353 CBX3P4-201ENST00000538909 354 ntBASIC3.35□□□□□ -1.87
FOXN1O15353 AC103996.1-201ENST00000555468 102 ntBASIC3.35□□□□□ -1.87
FOXN1O15353 AL157871.3-201ENST00000557231 293 ntBASIC3.35□□□□□ -1.87
FOXN1O15353 HMGB1P14-201ENST00000557424 591 ntBASIC3.35□□□□□ -1.87
FOXN1O15353 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.35□□□□□ -1.87
FOXN1O15353 AL713866.2-201ENST00000603579 219 ntBASIC3.35□□□□□ -1.87
FOXN1O15353 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.35□□□□□ -1.87
FOXN1O15353 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
FOXN1O15353 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FOXN1O15353 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.35□□□□□ -1.87
FOXN1O15353 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
FOXN1O15353 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
FOXN1O15353 RNA5SP289-201ENST00000362332 137 ntBASIC3.34□□□□□ -1.87
FOXN1O15353 Y_RNA.199-201ENST00000364014 102 ntBASIC3.34□□□□□ -1.87
FOXN1O15353 RNU1-112P-201ENST00000364401 164 ntBASIC3.34□□□□□ -1.87
FOXN1O15353 RNU6-378P-201ENST00000384324 107 ntBASIC3.34□□□□□ -1.87
FOXN1O15353 MIR9-1-201ENST00000385198 89 ntBASIC3.34□□□□□ -1.87
FOXN1O15353 MIR190B-201ENST00000401119 79 ntBASIC3.34□□□□□ -1.87
FOXN1O15353 RNA5SP274-201ENST00000410484 108 ntBASIC3.34□□□□□ -1.87
FOXN1O15353 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.34□□□□□ -1.87
FOXN1O15353 MTATP6P4-201ENST00000427725 675 ntBASIC3.34□□□□□ -1.87
FOXN1O15353 ARF4P2-201ENST00000430209 526 ntBASIC3.34□□□□□ -1.87
FOXN1O15353 AC079354.2-201ENST00000453523 154 ntBASIC3.34□□□□□ -1.87
FOXN1O15353 U8.21-201ENST00000459536 136 ntBASIC3.34□□□□□ -1.87
FOXN1O15353 SERF1AP1-201ENST00000514575 187 ntBASIC3.34□□□□□ -1.87
FOXN1O15353 RNU6-143P-201ENST00000516942 93 ntBASIC3.34□□□□□ -1.87
FOXN1O15353 RNA5SP380-201ENST00000517190 98 ntBASIC3.34□□□□□ -1.87
FOXN1O15353 AC022868.1-201ENST00000517767 391 ntBASIC3.34□□□□□ -1.87
FOXN1O15353 AC109329.2-201ENST00000519658 482 ntBASIC3.34□□□□□ -1.87
FOXN1O15353 AC087441.2-201ENST00000529141 262 ntBASIC3.34□□□□□ -1.87
FOXN1O15353 AL590705.4-201ENST00000532209 134 ntBASIC3.34□□□□□ -1.87
FOXN1O15353 AC004852.3-201ENST00000614131 326 ntBASIC3.34□□□□□ -1.87
FOXN1O15353 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.34□□□□□ -1.87
FOXN1O15353 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.34□□□□□ -1.87
FOXN1O15353 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
FOXN1O15353 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
FOXN1O15353 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.34□□□□□ -1.88
FOXN1O15353 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
FOXN1O15353 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
FOXN1O15353 AC008264.2-201ENST00000610193 3731 ntBASIC3.33□□□□□ -1.88
FOXN1O15353 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.33□□□□□ -1.88
FOXN1O15353 Y_RNA.33-201ENST00000362591 102 ntBASIC3.33□□□□□ -1.88
FOXN1O15353 RNA5SP240-201ENST00000365355 128 ntBASIC3.33□□□□□ -1.88
FOXN1O15353 Y_RNA.405-201ENST00000383979 100 ntBASIC3.33□□□□□ -1.88
FOXN1O15353 Y_RNA.451-201ENST00000384200 100 ntBASIC3.33□□□□□ -1.88
FOXN1O15353 Y_RNA.524-201ENST00000384564 100 ntBASIC3.33□□□□□ -1.88
FOXN1O15353 Y_RNA.561-201ENST00000384694 100 ntBASIC3.33□□□□□ -1.88
FOXN1O15353 MIR301A-201ENST00000385261 86 ntBASIC3.33□□□□□ -1.88
FOXN1O15353 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.33□□□□□ -1.88
FOXN1O15353 RNU6-1140P-201ENST00000410517 106 ntBASIC3.33□□□□□ -1.88
FOXN1O15353 Y_RNA.602-201ENST00000410535 92 ntBASIC3.33□□□□□ -1.88
FOXN1O15353 RN7SKP223-201ENST00000410582 62 ntBASIC3.33□□□□□ -1.88
FOXN1O15353 RPL23AP36-201ENST00000413895 458 ntBASIC3.33□□□□□ -1.88
FOXN1O15353 TMEM167AP1-201ENST00000423409 219 ntBASIC3.33□□□□□ -1.88
FOXN1O15353 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FOXN1O15353 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.33□□□□□ -1.88
FOXN1O15353 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.33□□□□□ -1.88
FOXN1O15353 U8.22-201ENST00000459141 133 ntBASIC3.33□□□□□ -1.88
FOXN1O15353 RNU7-120P-201ENST00000459334 63 ntBASIC3.33□□□□□ -1.88
FOXN1O15353 RNU7-87P-201ENST00000459343 62 ntBASIC3.33□□□□□ -1.88
FOXN1O15353 AC087588.1-201ENST00000462203 316 ntBASIC3.33□□□□□ -1.88
FOXN1O15353 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.33□□□□□ -1.88
FOXN1O15353 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.33□□□□□ -1.88
FOXN1O15353 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.33□□□□□ -1.88
FOXN1O15353 Y_RNA.683-201ENST00000516508 93 ntBASIC3.33□□□□□ -1.88
FOXN1O15353 RNA5SP309-201ENST00000516670 106 ntBASIC3.33□□□□□ -1.88
FOXN1O15353 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
FOXN1O15353 MIR3690-201ENST00000580266 75 ntBASIC3.33□□□□□ -1.88
FOXN1O15353 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.33□□□□□ -1.88
FOXN1O15353 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.33□□□□□ -1.88
FOXN1O15353 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
FOXN1O15353 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
FOXN1O15353 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
FOXN1O15353 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
FOXN1O15353 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.33□□□□□ -1.88
FOXN1O15353 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.32□□□□□ -1.88
FOXN1O15353 RNU5A-1-201ENST00000362698 116 ntBASIC3.32□□□□□ -1.88
FOXN1O15353 Y_RNA.76-201ENST00000362931 109 ntBASIC3.32□□□□□ -1.88
FOXN1O15353 RNU6-395P-201ENST00000365662 106 ntBASIC3.32□□□□□ -1.88
FOXN1O15353 Y_RNA.581-201ENST00000391017 97 ntBASIC3.32□□□□□ -1.88
FOXN1O15353 SNORA12.2-201ENST00000391040 156 ntBASIC3.32□□□□□ -1.88
FOXN1O15353 RNU6-1025P-201ENST00000410629 104 ntBASIC3.32□□□□□ -1.88
FOXN1O15353 AL513331.1-201ENST00000411908 397 ntBASIC3.32□□□□□ -1.88
FOXN1O15353 COX6CP10-201ENST00000416832 224 ntBASIC3.32□□□□□ -1.88
FOXN1O15353 AC079780.1-201ENST00000428259 207 ntBASIC3.32□□□□□ -1.88
FOXN1O15353 RPL23AP45-201ENST00000476406 468 ntBASIC3.32□□□□□ -1.88
FOXN1O15353 RN7SL499P-201ENST00000481141 276 ntBASIC3.32□□□□□ -1.88
FOXN1O15353 AC074198.2-201ENST00000508153 258 ntBASIC3.32□□□□□ -1.88
FOXN1O15353 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.32□□□□□ -1.88
FOXN1O15353 SNORA25.14-201ENST00000516481 132 ntBASIC3.32□□□□□ -1.88
FOXN1O15353 RNU6-1073P-201ENST00000517182 106 ntBASIC3.32□□□□□ -1.88
FOXN1O15353 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.32□□□□□ -1.88
FOXN1O15353 AC091144.1-201ENST00000519573 138 ntBASIC3.32□□□□□ -1.88
FOXN1O15353 AC024405.2-202ENST00000532731 184 ntBASIC3.32□□□□□ -1.88
FOXN1O15353 AP002392.1-201ENST00000537692 208 ntBASIC3.32□□□□□ -1.88
FOXN1O15353 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.32□□□□□ -1.88
FOXN1O15353 MIR4781-201ENST00000585250 76 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms