Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC-1.26□□□□□ -2.61
NDUFA1O15239 AC116562.3-201ENST00000506136 177 ntBASIC-1.26□□□□□ -2.61
NDUFA1O15239 AC022616.3-201ENST00000523940 148 ntBASIC-1.26□□□□□ -2.61
NDUFA1O15239 AC104820.1-201ENST00000624183 307 ntBASIC-1.26□□□□□ -2.61
NDUFA1O15239 RNU6-862P-201ENST00000362804 105 ntBASIC-1.27□□□□□ -2.61
NDUFA1O15239 RNU6-444P-201ENST00000383988 108 ntBASIC-1.27□□□□□ -2.61
NDUFA1O15239 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.27□□□□□ -2.61
NDUFA1O15239 MIR649-201ENST00000384843 97 ntBASIC-1.27□□□□□ -2.61
NDUFA1O15239 MIR186-201ENST00000384988 86 ntBASIC-1.27□□□□□ -2.61
NDUFA1O15239 AL079342.2-201ENST00000403367 482 ntBASIC-1.27□□□□□ -2.61
NDUFA1O15239 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-1.27□□□□□ -2.61
NDUFA1O15239 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC-1.27□□□□□ -2.61
NDUFA1O15239 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-1.27□□□□□ -2.61
NDUFA1O15239 AC002381.1-201ENST00000447049 280 ntBASIC-1.27□□□□□ -2.61
NDUFA1O15239 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC-1.27□□□□□ -2.61
NDUFA1O15239 AL355297.3-201ENST00000604082 446 ntBASIC-1.27□□□□□ -2.61
NDUFA1O15239 AC004067.1-201ENST00000608733 700 ntBASIC-1.27□□□□□ -2.61
NDUFA1O15239 Y_RNA.332-201ENST00000365271 113 ntBASIC-1.28□□□□□ -2.61
NDUFA1O15239 TMSB4XP1-201ENST00000424567 135 ntBASIC-1.28□□□□□ -2.61
NDUFA1O15239 AC004854.1-201ENST00000440356 349 ntBASIC-1.28□□□□□ -2.61
NDUFA1O15239 MTND1P30-201ENST00000441241 901 ntBASIC-1.28□□□□□ -2.61
NDUFA1O15239 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-1.28□□□□□ -2.61
NDUFA1O15239 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.28□□□□□ -2.61
NDUFA1O15239 SCARNA17-201ENST00000516183 144 ntBASIC-1.28□□□□□ -2.61
NDUFA1O15239 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-1.28□□□□□ -2.61
NDUFA1O15239 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC-1.28□□□□□ -2.61
NDUFA1O15239 MIR4300-201ENST00000581016 96 ntBASIC-1.28□□□□□ -2.61
NDUFA1O15239 MIR4263-201ENST00000584745 83 ntBASIC-1.28□□□□□ -2.61
NDUFA1O15239 AC104695.3-201ENST00000604052 296 ntBASIC-1.28□□□□□ -2.61
NDUFA1O15239 AC008759.3-201ENST00000613300 508 ntBASIC-1.28□□□□□ -2.61
NDUFA1O15239 AC106754.2-201ENST00000623006 233 ntBASIC-1.28□□□□□ -2.61
NDUFA1O15239 AL162726.3-218ENST00000636401 95 ntBASIC-1.28□□□□□ -2.61
NDUFA1O15239 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.29□□□□□ -2.62
NDUFA1O15239 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.29□□□□□ -2.62
NDUFA1O15239 SNORD83B-201ENST00000386745 93 ntBASIC-1.29□□□□□ -2.62
NDUFA1O15239 RNA5SP163-201ENST00000410304 99 ntBASIC-1.29□□□□□ -2.62
NDUFA1O15239 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-1.29□□□□□ -2.62
NDUFA1O15239 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-1.29□□□□□ -2.62
NDUFA1O15239 snoU13.19-201ENST00000459148 104 ntBASIC-1.29□□□□□ -2.62
NDUFA1O15239 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.29□□□□□ -2.62
NDUFA1O15239 RNU4-49P-201ENST00000516080 140 ntBASIC-1.29□□□□□ -2.62
NDUFA1O15239 RNU1-86P-201ENST00000516108 154 ntBASIC-1.29□□□□□ -2.62
NDUFA1O15239 RNU1-107P-201ENST00000516617 154 ntBASIC-1.29□□□□□ -2.62
NDUFA1O15239 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-1.29□□□□□ -2.62
NDUFA1O15239 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-1.29□□□□□ -2.62
NDUFA1O15239 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-1.29□□□□□ -2.62
NDUFA1O15239 AL355598.1-201ENST00000604169 202 ntBASIC-1.29□□□□□ -2.62
NDUFA1O15239 AC006504.8-201ENST00000621046 635 ntBASIC-1.29□□□□□ -2.62
NDUFA1O15239 RNY3P5-201ENST00000384127 102 ntBASIC-1.3□□□□□ -2.62
NDUFA1O15239 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.3□□□□□ -2.62
NDUFA1O15239 RNU6-658P-201ENST00000384606 106 ntBASIC-1.3□□□□□ -2.62
NDUFA1O15239 MIR153-2-201ENST00000385225 87 ntBASIC-1.3□□□□□ -2.62
NDUFA1O15239 SPINT5P-201ENST00000448174 155 ntBASIC-1.3□□□□□ -2.62
NDUFA1O15239 USP9YP25-201ENST00000457708 443 ntBASIC-1.3□□□□□ -2.62
NDUFA1O15239 MIR3136-201ENST00000583498 78 ntBASIC-1.3□□□□□ -2.62
NDUFA1O15239 AL391903.3-201ENST00000612158 163 ntBASIC-1.3□□□□□ -2.62
NDUFA1O15239 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-1.3□□□□□ -2.62
NDUFA1O15239 SNORA3B-201ENST00000391305 131 ntBASIC-1.31□□□□□ -2.62
NDUFA1O15239 AL603865.2-201ENST00000401679 213 ntBASIC-1.31□□□□□ -2.62
NDUFA1O15239 AL357139.1-201ENST00000407792 426 ntBASIC-1.31□□□□□ -2.62
NDUFA1O15239 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.31□□□□□ -2.62
NDUFA1O15239 ARL5AP1-201ENST00000418991 388 ntBASIC-1.31□□□□□ -2.62
NDUFA1O15239 RPL32P14-201ENST00000463196 378 ntBASIC-1.31□□□□□ -2.62
NDUFA1O15239 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-1.31□□□□□ -2.62
NDUFA1O15239 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-1.31□□□□□ -2.62
NDUFA1O15239 AL160314.1-201ENST00000490836 438 ntBASIC-1.31□□□□□ -2.62
NDUFA1O15239 AC008628.1-201ENST00000508663 265 ntBASIC-1.31□□□□□ -2.62
NDUFA1O15239 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-1.31□□□□□ -2.62
NDUFA1O15239 MIR548AO-201ENST00000579992 96 ntBASIC-1.31□□□□□ -2.62
NDUFA1O15239 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-1.31□□□□□ -2.62
NDUFA1O15239 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-1.31□□□□□ -2.62
NDUFA1O15239 SEPT14P17-201ENST00000617978 177 ntBASIC-1.31□□□□□ -2.62
NDUFA1O15239 AL590396.4-201ENST00000636779 956 ntBASIC-1.31□□□□□ -2.62
NDUFA1O15239 RNU6-529P-201ENST00000363383 104 ntBASIC-1.32□□□□□ -2.62
NDUFA1O15239 SMIM11P1-201ENST00000369586 178 ntBASIC-1.32□□□□□ -2.62
NDUFA1O15239 MIR653-201ENST00000385279 96 ntBASIC-1.32□□□□□ -2.62
NDUFA1O15239 AL353997.1-201ENST00000432936 108 ntBASIC-1.32□□□□□ -2.62
NDUFA1O15239 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-1.32□□□□□ -2.62
NDUFA1O15239 SCARNA18-201ENST00000459004 134 ntBASIC-1.32□□□□□ -2.62
NDUFA1O15239 snoU13.11-201ENST00000459219 104 ntBASIC-1.32□□□□□ -2.62
NDUFA1O15239 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC-1.32□□□□□ -2.62
NDUFA1O15239 AC116655.1-201ENST00000508324 901 ntBASIC-1.32□□□□□ -2.62
NDUFA1O15239 RNA5SP290-201ENST00000517133 127 ntBASIC-1.32□□□□□ -2.62
NDUFA1O15239 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC-1.32□□□□□ -2.62
NDUFA1O15239 MTND3P19-201ENST00000603825 345 ntBASIC-1.32□□□□□ -2.62
NDUFA1O15239 RBM11P1-201ENST00000604951 799 ntBASIC-1.32□□□□□ -2.62
NDUFA1O15239 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-1.33□□□□□ -2.62
NDUFA1O15239 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-1.33□□□□□ -2.62
NDUFA1O15239 MIR1-1-201ENST00000362147 71 ntBASIC-1.33□□□□□ -2.62
NDUFA1O15239 RNU6-30P-201ENST00000384561 107 ntBASIC-1.33□□□□□ -2.62
NDUFA1O15239 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.33□□□□□ -2.62
NDUFA1O15239 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-1.33□□□□□ -2.62
NDUFA1O15239 AC246785.4-201ENST00000605374 287 ntBASIC-1.33□□□□□ -2.62
NDUFA1O15239 RNU6-1280P-201ENST00000365211 107 ntBASIC-1.34□□□□□ -2.62
NDUFA1O15239 RNU6-921P-201ENST00000384361 107 ntBASIC-1.34□□□□□ -2.62
NDUFA1O15239 RNU6-31P-201ENST00000384388 108 ntBASIC-1.34□□□□□ -2.62
NDUFA1O15239 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.34□□□□□ -2.62
NDUFA1O15239 MIR29B2-201ENST00000385055 81 ntBASIC-1.34□□□□□ -2.62
NDUFA1O15239 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC-1.34□□□□□ -2.62
NDUFA1O15239 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC-1.34□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms