Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM38O00635 Y_RNA.20-201ENST00000362479 113 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 Y_RNA.48-201ENST00000362710 103 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 RNU6-338P-201ENST00000383888 105 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 Y_RNA.551-201ENST00000384661 102 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 RNU6-1156P-201ENST00000410365 100 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 RN7SKP220-201ENST00000410611 288 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 RNU6-293P-201ENST00000411259 106 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 RPL21P38-201ENST00000418090 167 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 AL591043.1-201ENST00000432461 424 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 AL645568.3-201ENST00000433683 316 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 AL513043.1-201ENST00000439124 535 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 RPS12P18-201ENST00000442381 270 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.06□□□□□ -1.92
TRIM38O00635 OR2AQ1P-201ENST00000451972 200 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 MTCO3P8-201ENST00000453691 755 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.06□□□□□ -1.92
TRIM38O00635 RPL17P19-201ENST00000489069 552 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 AC093852.1-201ENST00000503587 266 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.06□□□□□ -1.92
TRIM38O00635 RN7SKP43-201ENST00000516173 320 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 RNU6-897P-201ENST00000517135 105 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 AC130289.1-201ENST00000577321 73 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM38O00635 AC090897.2-201ENST00000581715 130 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 RPS15AP11-201ENST00000594193 385 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 AC009314.1-201ENST00000603871 304 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 AC019159.1-201ENST00000605094 187 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 AC005046.1-201ENST00000608515 625 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 MIR7157-201ENST00000635801 60 ntBASIC3.06□□□□□ -1.92
TRIM38O00635 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.06□□□□□ -1.92
TRIM38O00635 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM38O00635 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
TRIM38O00635 RNU6-527P-201ENST00000363425 104 ntBASIC3.05□□□□□ -1.92
TRIM38O00635 SNORD27-201ENST00000363981 72 ntBASIC3.05□□□□□ -1.92
TRIM38O00635 Y_RNA.274-201ENST00000364714 101 ntBASIC3.05□□□□□ -1.92
TRIM38O00635 RNU6-336P-201ENST00000364891 107 ntBASIC3.05□□□□□ -1.92
TRIM38O00635 RNU6-827P-201ENST00000365553 106 ntBASIC3.05□□□□□ -1.92
TRIM38O00635 RNU6-746P-201ENST00000384112 109 ntBASIC3.05□□□□□ -1.92
TRIM38O00635 Y_RNA.478-201ENST00000384358 107 ntBASIC3.05□□□□□ -1.92
TRIM38O00635 Y_RNA.577-201ENST00000384794 101 ntBASIC3.05□□□□□ -1.92
TRIM38O00635 SNORD73A-201ENST00000386062 65 ntBASIC3.05□□□□□ -1.92
TRIM38O00635 MIR548I2-201ENST00000408348 149 ntBASIC3.05□□□□□ -1.92
TRIM38O00635 RNU6-121P-201ENST00000410525 99 ntBASIC3.05□□□□□ -1.92
TRIM38O00635 AL133396.1-201ENST00000432048 687 ntBASIC3.05□□□□□ -1.92
TRIM38O00635 LINC01399-202ENST00000458450 244 ntBASIC3.05□□□□□ -1.92
TRIM38O00635 RNU6-1037P-201ENST00000459571 107 ntBASIC3.05□□□□□ -1.92
TRIM38O00635 AP001025.1-201ENST00000486139 332 ntBASIC3.05□□□□□ -1.92
TRIM38O00635 AK3P2-201ENST00000507976 429 ntBASIC3.05□□□□□ -1.92
TRIM38O00635 RNA5SP112-201ENST00000515937 99 ntBASIC3.05□□□□□ -1.92
TRIM38O00635 RN7SKP282-201ENST00000516824 299 ntBASIC3.05□□□□□ -1.92
TRIM38O00635 AC104576.1-201ENST00000524225 88 ntBASIC3.05□□□□□ -1.92
TRIM38O00635 AP003733.2-201ENST00000529409 171 ntBASIC3.05□□□□□ -1.92
TRIM38O00635 AC006600.1-201ENST00000572529 153 ntBASIC3.05□□□□□ -1.92
TRIM38O00635 AC006023.1-201ENST00000603944 259 ntBASIC3.05□□□□□ -1.92
TRIM38O00635 AC024581.2-201ENST00000619986 252 ntBASIC3.05□□□□□ -1.92
TRIM38O00635 MIR622-201ENST00000638396 96 ntBASIC3.05□□□□□ -1.92
TRIM38O00635 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM38O00635 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM38O00635 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM38O00635 RNU6-212P-201ENST00000362642 104 ntBASIC3.04□□□□□ -1.92
TRIM38O00635 RNU6-1010P-201ENST00000362757 107 ntBASIC3.04□□□□□ -1.92
TRIM38O00635 SNORA71.1-201ENST00000364523 117 ntBASIC3.04□□□□□ -1.92
TRIM38O00635 Y_RNA.416-201ENST00000384014 113 ntBASIC3.04□□□□□ -1.92
TRIM38O00635 SNORD15B-201ENST00000384714 146 ntBASIC3.04□□□□□ -1.92
TRIM38O00635 PCNPP3-201ENST00000393579 471 ntBASIC3.04□□□□□ -1.92
TRIM38O00635 AL031121.1-201ENST00000406553 254 ntBASIC3.04□□□□□ -1.92
TRIM38O00635 RNU6-174P-201ENST00000410406 106 ntBASIC3.04□□□□□ -1.92
TRIM38O00635 RN7SKP123-201ENST00000410732 291 ntBASIC3.04□□□□□ -1.92
TRIM38O00635 RNU6-1245P-201ENST00000411130 106 ntBASIC3.04□□□□□ -1.92
TRIM38O00635 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM38O00635 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.04□□□□□ -1.92
TRIM38O00635 AL139109.1-201ENST00000455491 297 ntBASIC3.04□□□□□ -1.92
TRIM38O00635 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM38O00635 TRBVB-201ENST00000477100 408 ntBASIC3.04□□□□□ -1.92
TRIM38O00635 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM38O00635 AC109329.1-201ENST00000518744 317 ntBASIC3.04□□□□□ -1.92
TRIM38O00635 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.04□□□□□ -1.92
TRIM38O00635 CBX3P8-201ENST00000532412 525 ntBASIC3.04□□□□□ -1.92
TRIM38O00635 AC079598.5-201ENST00000547460 117 ntBASIC3.04□□□□□ -1.92
TRIM38O00635 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.04□□□□□ -1.92
TRIM38O00635 MIR4672-201ENST00000583126 81 ntBASIC3.04□□□□□ -1.92
TRIM38O00635 AC004792.1-201ENST00000614523 137 ntBASIC3.04□□□□□ -1.92
TRIM38O00635 AP001282.2-201ENST00000616149 309 ntBASIC3.04□□□□□ -1.92
TRIM38O00635 AL138825.1-201ENST00000618587 192 ntBASIC3.04□□□□□ -1.92
TRIM38O00635 AL159153.1-201ENST00000619688 317 ntBASIC3.04□□□□□ -1.92
TRIM38O00635 AC130454.1-201ENST00000622948 401 ntBASIC3.04□□□□□ -1.92
TRIM38O00635 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM38O00635 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM38O00635 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.04□□□□□ -1.92
TRIM38O00635 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
TRIM38O00635 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
TRIM38O00635 RNU6-486P-201ENST00000363116 107 ntBASIC3.03□□□□□ -1.92
TRIM38O00635 RNU6-886P-201ENST00000384319 105 ntBASIC3.03□□□□□ -1.92
TRIM38O00635 SNORA51.11-201ENST00000384442 131 ntBASIC3.03□□□□□ -1.92
TRIM38O00635 RNU6-130P-201ENST00000411112 103 ntBASIC3.03□□□□□ -1.92
TRIM38O00635 AC104332.1-201ENST00000440471 797 ntBASIC3.03□□□□□ -1.92
TRIM38O00635 AC007969.2-201ENST00000441891 191 ntBASIC3.03□□□□□ -1.92
TRIM38O00635 RNU7-169P-201ENST00000459456 61 ntBASIC3.03□□□□□ -1.92
TRIM38O00635 Y_RNA.700-201ENST00000516806 100 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms