Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC002429.1-201ENST00000437672 148 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.01□□□□□ -2.41
CACNA1AO00555 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.01□□□□□ -2.41
CACNA1AO00555 AC008628.1-201ENST00000508663 265 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 AL356057.1-201ENST00000533798 831 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 AC025423.5-201ENST00000550230 219 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC-0.01□□□□□ -2.41
CACNA1AO00555 AC138915.2-201ENST00000569776 97 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 TMF1P1-201ENST00000576058 373 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 MIR3169-201ENST00000578032 83 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 AC126365.2-201ENST00000580630 379 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 AC005261.5-201ENST00000596280 355 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 AC097065.2-201ENST00000608159 533 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC-0.01□□□□□ -2.41
CACNA1AO00555 MTND1P37-201ENST00000636562 264 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 MIR4315-1-201ENST00000636800 73 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 MIR4315-2-201ENST00000640925 73 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 SNORD115-24-201ENST00000363528 82 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 RNU6-438P-201ENST00000365561 103 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 BTF3L4P3-201ENST00000418879 476 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 AC011233.1-201ENST00000422812 283 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 RAB28P5-201ENST00000427490 651 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.01□□□□□ -2.41
CACNA1AO00555 USP9YP14-201ENST00000430663 563 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.01□□□□□ -2.41
CACNA1AO00555 snoU13.8-201ENST00000458890 104 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 TMEM251P1-201ENST00000503717 318 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 AC116347.2-201ENST00000514912 523 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 RNU6-416P-201ENST00000516265 103 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.01□□□□□ -2.41
CACNA1AO00555 AC131055.1-201ENST00000584626 316 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 AC098483.2-201ENST00000603158 454 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 AL118556.2-201ENST00000614375 824 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 SEPT14P17-201ENST00000617978 177 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 AL596245.1-201ENST00000618994 362 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.01□□□□□ -2.41
CACNA1AO00555 AL078595.3-201ENST00000623815 1166 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC-0.01□□□□□ -2.41
CACNA1AO00555 U6.99-201ENST00000637524 83 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 CASC19-280ENST00000642102 1351 ntBASIC-0.01□□□□□ -2.41
CACNA1AO00555 RNU6-1010P-201ENST00000362757 107 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 MIR520A-201ENST00000384862 85 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 MIR518A1-201ENST00000385068 85 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 AL357139.1-201ENST00000407792 426 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 RNU2-23P-201ENST00000410545 195 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 SKA2P1-201ENST00000425592 390 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-0.02□□□□□ -2.41
CACNA1AO00555 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.02□□□□□ -2.41
CACNA1AO00555 AC090615.1-201ENST00000577519 154 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 AL360219.1-201ENST00000610230 366 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC-0.02□□□□□ -2.41
CACNA1AO00555 AC005332.6-201ENST00000613178 446 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 7SK.10-201ENST00000621414 298 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 AL391994.1-201ENST00000254724 282 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 SNORD114-5-201ENST00000362928 70 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 SNORD114-19-201ENST00000363072 75 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 RNU6-1066P-201ENST00000363573 105 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 U8.7-201ENST00000364940 136 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 RNU6-969P-201ENST00000383900 105 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 AL603865.2-201ENST00000401679 213 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 MTND1P21-201ENST00000412991 285 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 AC073261.1-201ENST00000429409 121 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 USP9YP22-201ENST00000438971 294 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 FABP5P15-201ENST00000453566 214 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 RNU7-21P-201ENST00000459430 62 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 AC023194.1-201ENST00000493084 308 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 AC093534.1-201ENST00000504977 132 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC-0.02□□□□□ -2.41
CACNA1AO00555 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.02□□□□□ -2.41
CACNA1AO00555 AC022861.1-201ENST00000522981 663 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-0.02□□□□□ -2.41
CACNA1AO00555 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.02□□□□□ -2.41
CACNA1AO00555 MIR3136-201ENST00000583498 78 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-0.02□□□□□ -2.41
CACNA1AO00555 BX284668.6-201ENST00000606899 438 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 MIR8063-201ENST00000621930 81 ntBASIC-0.02□□□□□ -2.41
CACNA1AO00555 RNU4-79P-201ENST00000362764 141 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 Y_RNA.332-201ENST00000365271 113 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
CACNA1AO00555 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
CACNA1AO00555 AL133475.1-201ENST00000404414 305 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-0.03□□□□□ -2.41
CACNA1AO00555 AC104332.1-201ENST00000440471 797 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 SNRPEP8-201ENST00000442866 260 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 RAD1P2-201ENST00000446414 663 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 EEF1E1P1-201ENST00000446998 430 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 LAMTOR3P2-201ENST00000504479 232 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 SNORA40.12-201ENST00000516329 111 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 RNU6-143P-201ENST00000516942 93 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 AP000763.2-201ENST00000540641 163 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 AC022523.2-201ENST00000561045 150 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 AL132657.2-201ENST00000564417 358 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC-0.03□□□□□ -2.41
CACNA1AO00555 AC137800.2-201ENST00000574375 120 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 Y_RNA.234-201ENST00000364409 97 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms