Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 XGY1-201ENST00000381172 446 ntBASIC2.08□□□□□ -2.08
CCDC188H7C350 RNU6-378P-201ENST00000384324 107 ntBASIC2.08□□□□□ -2.08
CCDC188H7C350 MIR17-201ENST00000385012 84 ntBASIC2.08□□□□□ -2.08
CCDC188H7C350 RNU6-1093P-201ENST00000391194 107 ntBASIC2.08□□□□□ -2.08
CCDC188H7C350 RNA5SP494-201ENST00000410653 129 ntBASIC2.08□□□□□ -2.08
CCDC188H7C350 RNA5SP489-201ENST00000410986 109 ntBASIC2.08□□□□□ -2.08
CCDC188H7C350 AL030996.1-201ENST00000411430 235 ntBASIC2.08□□□□□ -2.08
CCDC188H7C350 VN1R36P-201ENST00000414936 291 ntBASIC2.08□□□□□ -2.08
CCDC188H7C350 MTCO1P21-201ENST00000416634 589 ntBASIC2.08□□□□□ -2.08
CCDC188H7C350 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC188H7C350 AC027124.2-201ENST00000428249 105 ntBASIC2.08□□□□□ -2.08
CCDC188H7C350 Z82205.1-201ENST00000428456 297 ntBASIC2.08□□□□□ -2.08
CCDC188H7C350 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC188H7C350 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC188H7C350 snoU13.6-201ENST00000458785 104 ntBASIC2.08□□□□□ -2.08
CCDC188H7C350 IGKV3-31-201ENST00000523109 329 ntBASIC2.08□□□□□ -2.08
CCDC188H7C350 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC188H7C350 AC100830.2-201ENST00000581636 240 ntBASIC2.08□□□□□ -2.08
CCDC188H7C350 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC188H7C350 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.08□□□□□ -2.08
CCDC188H7C350 AL022345.1-201ENST00000607292 135 ntBASIC2.08□□□□□ -2.08
CCDC188H7C350 SNORA43.4-201ENST00000629559 138 ntBASIC2.08□□□□□ -2.08
CCDC188H7C350 MIR3662-201ENST00000637030 95 ntBASIC2.08□□□□□ -2.08
CCDC188H7C350 AC027514.1-201ENST00000588561 1603 ntBASIC2.08□□□□□ -2.08
CCDC188H7C350 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
CCDC188H7C350 Y_RNA.89-201ENST00000363031 102 ntBASIC2.07□□□□□ -2.08
CCDC188H7C350 Y_RNA.99-201ENST00000363138 105 ntBASIC2.07□□□□□ -2.08
CCDC188H7C350 Y_RNA.100-201ENST00000363141 102 ntBASIC2.07□□□□□ -2.08
CCDC188H7C350 U8.2-201ENST00000363156 134 ntBASIC2.07□□□□□ -2.08
CCDC188H7C350 RNU6-254P-201ENST00000363377 107 ntBASIC2.07□□□□□ -2.08
CCDC188H7C350 Y_RNA.167-201ENST00000363735 109 ntBASIC2.07□□□□□ -2.08
CCDC188H7C350 SNORD32B-201ENST00000364460 84 ntBASIC2.07□□□□□ -2.08
CCDC188H7C350 RNU6-160P-201ENST00000384591 107 ntBASIC2.07□□□□□ -2.08
CCDC188H7C350 RNU11-3P-201ENST00000391111 133 ntBASIC2.07□□□□□ -2.08
CCDC188H7C350 AL139156.1-201ENST00000412785 841 ntBASIC2.07□□□□□ -2.08
CCDC188H7C350 BX510359.4-201ENST00000423750 193 ntBASIC2.07□□□□□ -2.08
CCDC188H7C350 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC188H7C350 PMCHL2-203ENST00000457791 237 ntBASIC2.07□□□□□ -2.08
CCDC188H7C350 snoU13.15-201ENST00000459407 104 ntBASIC2.07□□□□□ -2.08
CCDC188H7C350 RNU6-718P-201ENST00000516166 105 ntBASIC2.07□□□□□ -2.08
CCDC188H7C350 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC188H7C350 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC188H7C350 EIF4A1P12-201ENST00000551910 141 ntBASIC2.07□□□□□ -2.08
CCDC188H7C350 MIR4524B-201ENST00000581569 115 ntBASIC2.07□□□□□ -2.08
CCDC188H7C350 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC188H7C350 CYP2C61P-201ENST00000604072 290 ntBASIC2.07□□□□□ -2.08
CCDC188H7C350 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC188H7C350 RMST_3.1-201ENST00000611651 109 ntBASIC2.07□□□□□ -2.08
CCDC188H7C350 AC098657.3-201ENST00000620434 263 ntBASIC2.07□□□□□ -2.08
CCDC188H7C350 ZNF702P-202ENST00000434269 1966 ntBASIC2.07□□□□□ -2.08
CCDC188H7C350 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC188H7C350 RNU6-23P-201ENST00000363283 107 ntBASIC2.06□□□□□ -2.08
CCDC188H7C350 RNA5SP465-201ENST00000391195 109 ntBASIC2.06□□□□□ -2.08
CCDC188H7C350 RNA5SP201-201ENST00000410316 124 ntBASIC2.06□□□□□ -2.08
CCDC188H7C350 RNU2-40P-201ENST00000410833 196 ntBASIC2.06□□□□□ -2.08
CCDC188H7C350 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC188H7C350 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC188H7C350 AL353705.4-201ENST00000449661 238 ntBASIC2.06□□□□□ -2.08
CCDC188H7C350 AC092989.1-201ENST00000481235 277 ntBASIC2.06□□□□□ -2.08
CCDC188H7C350 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC188H7C350 MIR5089-201ENST00000580047 84 ntBASIC2.06□□□□□ -2.08
CCDC188H7C350 MIR3976-201ENST00000606807 139 ntBASIC2.06□□□□□ -2.08
CCDC188H7C350 PCGEM1.1-201ENST00000613431 131 ntBASIC2.06□□□□□ -2.08
CCDC188H7C350 SDR42E1P4-201ENST00000620894 481 ntBASIC2.06□□□□□ -2.08
CCDC188H7C350 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC188H7C350 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC188H7C350 Y_RNA.6-201ENST00000362350 114 ntBASIC2.05□□□□□ -2.08
CCDC188H7C350 Y_RNA.414-201ENST00000384011 101 ntBASIC2.05□□□□□ -2.08
CCDC188H7C350 MIR597-201ENST00000384968 97 ntBASIC2.05□□□□□ -2.08
CCDC188H7C350 RNA5SP450-201ENST00000411206 102 ntBASIC2.05□□□□□ -2.08
CCDC188H7C350 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC188H7C350 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC188H7C350 MTCO3P18-201ENST00000440206 761 ntBASIC2.05□□□□□ -2.08
CCDC188H7C350 AL353572.1-201ENST00000442490 417 ntBASIC2.05□□□□□ -2.08
CCDC188H7C350 PCMTD1P1-201ENST00000455560 355 ntBASIC2.05□□□□□ -2.08
CCDC188H7C350 RNU7-187P-201ENST00000458985 68 ntBASIC2.05□□□□□ -2.08
CCDC188H7C350 RNA5SP57-201ENST00000459463 123 ntBASIC2.05□□□□□ -2.08
CCDC188H7C350 AC008549.1-201ENST00000512900 643 ntBASIC2.05□□□□□ -2.08
CCDC188H7C350 RNU6-256P-201ENST00000516747 97 ntBASIC2.05□□□□□ -2.08
CCDC188H7C350 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC188H7C350 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC188H7C350 MIR4769-201ENST00000584126 77 ntBASIC2.05□□□□□ -2.08
CCDC188H7C350 MIR8076-201ENST00000611401 83 ntBASIC2.05□□□□□ -2.08
CCDC188H7C350 AC090617.10-201ENST00000624308 134 ntBASIC2.05□□□□□ -2.08
CCDC188H7C350 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC188H7C350 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CCDC188H7C350 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CCDC188H7C350 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
CCDC188H7C350 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
CCDC188H7C350 RNU6-562P-201ENST00000362731 107 ntBASIC2.04□□□□□ -2.08
CCDC188H7C350 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC188H7C350 SNORA32.2-201ENST00000384049 122 ntBASIC2.04□□□□□ -2.08
CCDC188H7C350 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC188H7C350 MIR548F1-201ENST00000408667 84 ntBASIC2.04□□□□□ -2.08
CCDC188H7C350 U3.40-201ENST00000408706 208 ntBASIC2.04□□□□□ -2.08
CCDC188H7C350 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC188H7C350 HMGN2P18-201ENST00000450680 270 ntBASIC2.04□□□□□ -2.08
CCDC188H7C350 RNU7-14P-201ENST00000459331 62 ntBASIC2.04□□□□□ -2.08
CCDC188H7C350 RPS29P27-201ENST00000463711 170 ntBASIC2.04□□□□□ -2.08
CCDC188H7C350 RPS27P21-201ENST00000486977 252 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 199.6 ms