Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AL353997.5-201ENST00000618886 171 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 AC100810.6-201ENST00000638068 285 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 AC131280.1-202ENST00000624067 4211 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 MTND4P5-201ENST00000435821 1374 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
NEDD8-MDP1E9PL57 MTND4P1-201ENST00000457501 1466 ntBASIC1.97□□□□□ -2.09
NEDD8-MDP1E9PL57 Y_RNA.135-201ENST00000363439 95 ntBASIC1.97□□□□□ -2.09
NEDD8-MDP1E9PL57 RNU6-128P-201ENST00000383976 107 ntBASIC1.97□□□□□ -2.09
NEDD8-MDP1E9PL57 RNU6-831P-201ENST00000384548 107 ntBASIC1.97□□□□□ -2.09
NEDD8-MDP1E9PL57 MIR561-201ENST00000385216 97 ntBASIC1.97□□□□□ -2.09
NEDD8-MDP1E9PL57 RNU6-325P-201ENST00000411132 105 ntBASIC1.97□□□□□ -2.09
NEDD8-MDP1E9PL57 AL030996.1-201ENST00000411430 235 ntBASIC1.97□□□□□ -2.09
NEDD8-MDP1E9PL57 AC025033.1-201ENST00000463883 194 ntBASIC1.97□□□□□ -2.09
NEDD8-MDP1E9PL57 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.97□□□□□ -2.09
NEDD8-MDP1E9PL57 CKS1BP2-201ENST00000497342 240 ntBASIC1.97□□□□□ -2.09
NEDD8-MDP1E9PL57 TRBVA-201ENST00000498804 316 ntBASIC1.97□□□□□ -2.09
NEDD8-MDP1E9PL57 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.97□□□□□ -2.09
NEDD8-MDP1E9PL57 AF235103.2-201ENST00000525753 346 ntBASIC1.97□□□□□ -2.09
NEDD8-MDP1E9PL57 SNORA59B-202ENST00000578183 701 ntBASIC1.97□□□□□ -2.09
NEDD8-MDP1E9PL57 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.97□□□□□ -2.09
NEDD8-MDP1E9PL57 SNORD98-201ENST00000636377 67 ntBASIC1.97□□□□□ -2.09
NEDD8-MDP1E9PL57 CENPCP1-201ENST00000533085 2578 ntBASIC1.97□□□□□ -2.09
NEDD8-MDP1E9PL57 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 AL359851.1-201ENST00000569460 4997 ntBASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 RNU6-227P-201ENST00000362865 103 ntBASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 SNORA25B-201ENST00000365507 128 ntBASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 RNU6-142P-201ENST00000384019 107 ntBASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 RNU6-95P-201ENST00000384697 107 ntBASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 RNU6-1106P-201ENST00000390845 107 ntBASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 RPL30P16-201ENST00000419341 429 ntBASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 CYCSP49-201ENST00000420810 319 ntBASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 AL590632.1-201ENST00000424289 371 ntBASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 AL645568.3-201ENST00000433683 316 ntBASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 RPL23AP7-203ENST00000449021 469 ntBASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 RNU7-187P-201ENST00000458985 68 ntBASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 Y_RNA.638-201ENST00000459374 113 ntBASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 MIR3136-201ENST00000583498 78 ntBASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 AL034555.1-201ENST00000604816 211 ntBASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 SNORD14A-201ENST00000606526 91 ntBASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 AC063943.3-201ENST00000615562 356 ntBASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 U6atac.1-201ENST00000616025 117 ntBASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 AL136221.1-201ENST00000621449 509 ntBASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 AC090517.3-201ENST00000625170 141 ntBASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
NEDD8-MDP1E9PL57 RNU6-1159P-201ENST00000362933 107 ntBASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 SNORA3A-201ENST00000364113 130 ntBASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 Y_RNA.212-201ENST00000364177 102 ntBASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 SNORD116-11-201ENST00000383882 92 ntBASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 SNORA36A-201ENST00000384221 132 ntBASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 MIR29B2-201ENST00000385055 81 ntBASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 AL590135.1-201ENST00000422215 156 ntBASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 AC019205.3-201ENST00000424573 156 ntBASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 AC016700.2-201ENST00000446011 156 ntBASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 AC015911.1-201ENST00000495111 156 ntBASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 RNU6-864P-201ENST00000516256 108 ntBASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 RNU6-358P-201ENST00000516564 75 ntBASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 RNU1-40P-201ENST00000516816 164 ntBASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 RNU6-1088P-201ENST00000516850 104 ntBASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 RNU1-97P-201ENST00000516872 164 ntBASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 AC018630.3-201ENST00000542637 96 ntBASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 AC233702.2-202ENST00000562547 291 ntBASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 AC018638.8-201ENST00000588755 281 ntBASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 AC023043.2-201ENST00000589678 1026 ntBASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 AC078795.3-201ENST00000602913 472 ntBASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 AL132822.1-201ENST00000617063 513 ntBASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.95□□□□□ -2.1
NEDD8-MDP1E9PL57 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 ZNF72P-201ENST00000425869 1908 ntBASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 AC092268.1-201ENST00000342691 405 ntBASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 Y_RNA.248-201ENST00000364501 109 ntBASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 RNA5SP201-201ENST00000410316 124 ntBASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 Y_RNA.597-201ENST00000410463 100 ntBASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 AL356379.1-201ENST00000414105 126 ntBASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 MTND3P9-201ENST00000429526 346 ntBASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 IFNA20P-201ENST00000436840 528 ntBASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 AC009238.1-201ENST00000442165 424 ntBASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 AC009237.6-201ENST00000446969 424 ntBASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 AC104564.1-201ENST00000493028 407 ntBASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 MTCO1P29-201ENST00000496868 288 ntBASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 AC016632.1-201ENST00000503994 196 ntBASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 AC096745.1-201ENST00000509945 370 ntBASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 PTP4A1P4-201ENST00000512479 322 ntBASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms