Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 Y_RNA.641-201ENST00000459414 105 ntBASIC3.71□□□□□ -1.82
UPK3BL1B0FP48 AC109925.1-201ENST00000478069 331 ntBASIC3.71□□□□□ -1.82
UPK3BL1B0FP48 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.71□□□□□ -1.82
UPK3BL1B0FP48 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.71□□□□□ -1.82
UPK3BL1B0FP48 AC055872.1-201ENST00000570978 278 ntBASIC3.71□□□□□ -1.82
UPK3BL1B0FP48 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.71□□□□□ -1.82
UPK3BL1B0FP48 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.71□□□□□ -1.82
UPK3BL1B0FP48 uc_338.14-201ENST00000613162 166 ntBASIC3.71□□□□□ -1.82
UPK3BL1B0FP48 AC004467.1-201ENST00000615678 330 ntBASIC3.71□□□□□ -1.82
UPK3BL1B0FP48 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
UPK3BL1B0FP48 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
UPK3BL1B0FP48 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 RNU6-774P-201ENST00000363238 107 ntBASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 Y_RNA.435-201ENST00000384095 112 ntBASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 SNORA18.3-201ENST00000384122 132 ntBASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 RNU6-1248P-201ENST00000391096 64 ntBASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 RPL23AP3-201ENST00000453844 468 ntBASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 AC091179.3-201ENST00000474761 144 ntBASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 Y_RNA.662-201ENST00000516028 97 ntBASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 RN7SKP209-201ENST00000516888 304 ntBASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 AC008011.1-201ENST00000545989 227 ntBASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 MIR3910-1-201ENST00000580936 111 ntBASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 AL034555.1-201ENST00000604816 211 ntBASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 AC092593.1-201ENST00000515413 1815 ntBASIC3.7□□□□□ -1.82
UPK3BL1B0FP48 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.69□□□□□ -1.82
UPK3BL1B0FP48 Y_RNA.101-201ENST00000363154 102 ntBASIC3.69□□□□□ -1.82
UPK3BL1B0FP48 RNU6-529P-201ENST00000363383 104 ntBASIC3.69□□□□□ -1.82
UPK3BL1B0FP48 RNU1-33P-201ENST00000364249 162 ntBASIC3.69□□□□□ -1.82
UPK3BL1B0FP48 RNU6-918P-201ENST00000391219 106 ntBASIC3.69□□□□□ -1.82
UPK3BL1B0FP48 RNA5SP354-201ENST00000391247 136 ntBASIC3.69□□□□□ -1.82
UPK3BL1B0FP48 RNU2-54P-201ENST00000410299 190 ntBASIC3.69□□□□□ -1.82
UPK3BL1B0FP48 RNU6-1140P-201ENST00000410517 106 ntBASIC3.69□□□□□ -1.82
UPK3BL1B0FP48 IFNA11P-201ENST00000446352 526 ntBASIC3.69□□□□□ -1.82
UPK3BL1B0FP48 AP001324.2-201ENST00000461163 319 ntBASIC3.69□□□□□ -1.82
UPK3BL1B0FP48 AL121594.1-201ENST00000475906 575 ntBASIC3.69□□□□□ -1.82
UPK3BL1B0FP48 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.69□□□□□ -1.82
UPK3BL1B0FP48 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.69□□□□□ -1.82
UPK3BL1B0FP48 MIR3133-201ENST00000583157 78 ntBASIC3.69□□□□□ -1.82
UPK3BL1B0FP48 AL162713.1-201ENST00000604480 262 ntBASIC3.69□□□□□ -1.82
UPK3BL1B0FP48 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
UPK3BL1B0FP48 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
UPK3BL1B0FP48 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
UPK3BL1B0FP48 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
UPK3BL1B0FP48 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 Y_RNA.233-201ENST00000364407 101 ntBASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 Y_RNA.240-201ENST00000364469 95 ntBASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 RNA5SP201-201ENST00000410316 124 ntBASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 RNA5SP475-201ENST00000410568 110 ntBASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 RNA5SP120-201ENST00000410900 112 ntBASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 RNU6-1199P-201ENST00000411249 104 ntBASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 RBMY2UP-201ENST00000453474 324 ntBASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 RNU6-191P-201ENST00000516295 94 ntBASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 YPEL5P2-201ENST00000605553 359 ntBASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 PCGEM1.1-201ENST00000613431 131 ntBASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 MIR4727-201ENST00000622232 55 ntBASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 MIR3674-201ENST00000636576 68 ntBASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.68□□□□□ -1.82
UPK3BL1B0FP48 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.67□□□□□ -1.82
UPK3BL1B0FP48 Y_RNA.506-201ENST00000384494 102 ntBASIC3.67□□□□□ -1.82
UPK3BL1B0FP48 RNU6-125P-201ENST00000384505 107 ntBASIC3.67□□□□□ -1.82
UPK3BL1B0FP48 SNORA48.2-201ENST00000390926 124 ntBASIC3.67□□□□□ -1.82
UPK3BL1B0FP48 Y_RNA.597-201ENST00000410463 100 ntBASIC3.67□□□□□ -1.82
UPK3BL1B0FP48 AIMP1P2-201ENST00000425294 312 ntBASIC3.67□□□□□ -1.82
UPK3BL1B0FP48 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
UPK3BL1B0FP48 AC115115.1-201ENST00000449927 248 ntBASIC3.67□□□□□ -1.82
UPK3BL1B0FP48 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.67□□□□□ -1.82
UPK3BL1B0FP48 RPL23AP62-201ENST00000463396 453 ntBASIC3.67□□□□□ -1.82
UPK3BL1B0FP48 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.67□□□□□ -1.82
UPK3BL1B0FP48 SNORD59.2-201ENST00000516873 68 ntBASIC3.67□□□□□ -1.82
UPK3BL1B0FP48 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.67□□□□□ -1.82
UPK3BL1B0FP48 AC005828.6-201ENST00000606610 232 ntBASIC3.67□□□□□ -1.82
UPK3BL1B0FP48 MIR7851-201ENST00000610611 160 ntBASIC3.67□□□□□ -1.82
UPK3BL1B0FP48 AC091932.3-201ENST00000624223 323 ntBASIC3.67□□□□□ -1.82
UPK3BL1B0FP48 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.67□□□□□ -1.82
UPK3BL1B0FP48 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
UPK3BL1B0FP48 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 281.3 ms