Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 MIR3941-201ENST00000582572 103 ntBASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 AC023043.2-201ENST00000589678 1026 ntBASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 AL132765.2-201ENST00000610812 351 ntBASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 uc_338.15-201ENST00000615470 191 ntBASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 RBBP8P1-201ENST00000449447 1844 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 SNORD56.1-201ENST00000362913 68 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 Y_RNA.142-201ENST00000363491 102 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 RNU6-1317P-201ENST00000364582 104 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 Y_RNA.339-201ENST00000365325 102 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 SNORD116-11-201ENST00000383882 92 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 Y_RNA.394-201ENST00000383942 103 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 Y_RNA.480-201ENST00000384364 102 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 MIR17-201ENST00000385012 84 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 MIR1289-2-201ENST00000408360 111 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 RNU6-325P-201ENST00000411132 105 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 AC022028.1-201ENST00000412054 408 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 Z82205.1-201ENST00000428456 297 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 RPS3AP52-201ENST00000435639 297 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 AL359672.1-201ENST00000442302 409 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 AC006026.2-201ENST00000457376 180 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 AC130509.1-201ENST00000464158 433 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 AP001025.1-201ENST00000486139 332 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 MTND5P5-201ENST00000503764 376 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 RNU6-120P-201ENST00000516077 103 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 RNU6-566P-201ENST00000516790 107 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 CYCSP27-201ENST00000527643 293 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 MIR4790-201ENST00000577799 79 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 RPL30P11-203ENST00000598995 310 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 AL117336.2-201ENST00000602435 335 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 MIR3976-201ENST00000606807 139 ntBASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.1□□□□□ -2.07
TRIM49BA6NDI0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 RNU6-1010P-201ENST00000362757 107 ntBASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 SNORA16B-201ENST00000364674 135 ntBASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 RNU5E-7P-201ENST00000365290 117 ntBASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 RNU4-52P-201ENST00000384209 138 ntBASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 RNU6-843P-201ENST00000384454 104 ntBASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 SUMO2P12-201ENST00000405924 140 ntBASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 MIR548K-201ENST00000408406 116 ntBASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 ARL5AP1-201ENST00000418991 388 ntBASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 AC003989.2-201ENST00000440224 169 ntBASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 RPS27P21-201ENST00000486977 252 ntBASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 MTCYBP40-201ENST00000509390 1135 ntBASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 PTP4A1P4-201ENST00000512479 322 ntBASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 SNORA4.4-201ENST00000515921 135 ntBASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 SNORA31.23-201ENST00000517219 133 ntBASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 AC026271.5-201ENST00000577873 130 ntBASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 MIR4448-201ENST00000584360 86 ntBASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 AL031274.2-201ENST00000599419 203 ntBASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 AC016727.1-205ENST00000605437 569 ntBASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 MIR1302-1-201ENST00000637932 143 ntBASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 U4.7-201ENST00000638126 106 ntBASIC2.09□□□□□ -2.07
TRIM49BA6NDI0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
TRIM49BA6NDI0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 Y_RNA.40-201ENST00000362645 93 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 SNORD114-1-201ENST00000362705 72 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 RNU6-562P-201ENST00000362731 107 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 RNU4-73P-201ENST00000363164 141 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 Y_RNA.166-201ENST00000363730 102 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 RNU6-105P-201ENST00000363909 104 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 RNU6-487P-201ENST00000365430 104 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 SNORA25B-201ENST00000365507 128 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 SNORA40.19-201ENST00000390846 128 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 RNA5SP489-201ENST00000410986 109 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 TOMM20P4-201ENST00000427861 435 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 MTND3P9-201ENST00000429526 346 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 SNAP23P1-201ENST00000433229 246 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 MTND1P17-201ENST00000448961 204 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 SNRPGP7-201ENST00000469016 106 ntBASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.08□□□□□ -2.08
TRIM49BA6NDI0 AC046134.1-201ENST00000514454 666 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms