Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC66A2RUB6 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC66A2RUB6 AC010615.1-201ENST00000594254 1764 ntBASIC3.44□□□□□ -1.86
CCDC66A2RUB6 RNU6-212P-201ENST00000362642 104 ntBASIC3.44□□□□□ -1.86
CCDC66A2RUB6 SNORD114-19-201ENST00000363072 75 ntBASIC3.44□□□□□ -1.86
CCDC66A2RUB6 RNU1-105P-201ENST00000363470 161 ntBASIC3.44□□□□□ -1.86
CCDC66A2RUB6 RNA5SP387-201ENST00000364226 106 ntBASIC3.44□□□□□ -1.86
CCDC66A2RUB6 Y_RNA.518-201ENST00000384552 113 ntBASIC3.44□□□□□ -1.86
CCDC66A2RUB6 RNU6-847P-201ENST00000411115 108 ntBASIC3.44□□□□□ -1.86
CCDC66A2RUB6 WARS2P1-201ENST00000429678 537 ntBASIC3.44□□□□□ -1.86
CCDC66A2RUB6 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC66A2RUB6 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC66A2RUB6 SNORD127-201ENST00000458892 86 ntBASIC3.44□□□□□ -1.86
CCDC66A2RUB6 RNU6-1132P-201ENST00000459214 107 ntBASIC3.44□□□□□ -1.86
CCDC66A2RUB6 RN7SL293P-201ENST00000481765 281 ntBASIC3.44□□□□□ -1.86
CCDC66A2RUB6 RNU6-570P-201ENST00000517051 105 ntBASIC3.44□□□□□ -1.86
CCDC66A2RUB6 UBL5P4-201ENST00000562584 236 ntBASIC3.44□□□□□ -1.86
CCDC66A2RUB6 MIR5695-201ENST00000579717 85 ntBASIC3.44□□□□□ -1.86
CCDC66A2RUB6 MIR376A1-201ENST00000616574 68 ntBASIC3.44□□□□□ -1.86
CCDC66A2RUB6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CCDC66A2RUB6 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CCDC66A2RUB6 RNU6-379P-201ENST00000363813 104 ntBASIC3.43□□□□□ -1.86
CCDC66A2RUB6 RNA5SP72-201ENST00000364442 117 ntBASIC3.43□□□□□ -1.86
CCDC66A2RUB6 RNU4-56P-201ENST00000364700 142 ntBASIC3.43□□□□□ -1.86
CCDC66A2RUB6 CD24P4-201ENST00000382840 243 ntBASIC3.43□□□□□ -1.86
CCDC66A2RUB6 Y_RNA.447-201ENST00000384184 113 ntBASIC3.43□□□□□ -1.86
CCDC66A2RUB6 Y_RNA.489-201ENST00000384410 101 ntBASIC3.43□□□□□ -1.86
CCDC66A2RUB6 MIR767-201ENST00000390228 109 ntBASIC3.43□□□□□ -1.86
CCDC66A2RUB6 SNORD115-46-201ENST00000390982 71 ntBASIC3.43□□□□□ -1.86
CCDC66A2RUB6 AL079342.1-201ENST00000401460 267 ntBASIC3.43□□□□□ -1.86
CCDC66A2RUB6 MRPL35P1-201ENST00000404272 572 ntBASIC3.43□□□□□ -1.86
CCDC66A2RUB6 SNORA11.1-201ENST00000408133 129 ntBASIC3.43□□□□□ -1.86
CCDC66A2RUB6 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC66A2RUB6 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC66A2RUB6 CYCSP35-201ENST00000451978 304 ntBASIC3.43□□□□□ -1.86
CCDC66A2RUB6 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC66A2RUB6 snoU13.14-201ENST00000459372 104 ntBASIC3.43□□□□□ -1.86
CCDC66A2RUB6 AP001324.2-201ENST00000461163 319 ntBASIC3.43□□□□□ -1.86
CCDC66A2RUB6 TRBVB-201ENST00000477100 408 ntBASIC3.43□□□□□ -1.86
CCDC66A2RUB6 AP004217.1-201ENST00000480579 346 ntBASIC3.43□□□□□ -1.86
CCDC66A2RUB6 RNU5F-2P-201ENST00000516066 82 ntBASIC3.43□□□□□ -1.86
CCDC66A2RUB6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.43□□□□□ -1.86
CCDC66A2RUB6 RN7SKP49-201ENST00000516675 260 ntBASIC3.43□□□□□ -1.86
CCDC66A2RUB6 RNA5SP54-201ENST00000516951 92 ntBASIC3.43□□□□□ -1.86
CCDC66A2RUB6 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC66A2RUB6 MIR4300-201ENST00000581016 96 ntBASIC3.43□□□□□ -1.86
CCDC66A2RUB6 AL137843.1-201ENST00000605078 385 ntBASIC3.43□□□□□ -1.86
CCDC66A2RUB6 AC011476.5-201ENST00000615594 130 ntBASIC3.43□□□□□ -1.86
CCDC66A2RUB6 LINC02555-201ENST00000563933 1951 ntBASIC3.43□□□□□ -1.86
CCDC66A2RUB6 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC66A2RUB6 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC66A2RUB6 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
CCDC66A2RUB6 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC66A2RUB6 RNA5SP361-201ENST00000362686 118 ntBASIC3.42□□□□□ -1.86
CCDC66A2RUB6 RNU6-529P-201ENST00000363383 104 ntBASIC3.42□□□□□ -1.86
CCDC66A2RUB6 RNU6-799P-201ENST00000363567 107 ntBASIC3.42□□□□□ -1.86
CCDC66A2RUB6 Y_RNA.333-201ENST00000365274 102 ntBASIC3.42□□□□□ -1.86
CCDC66A2RUB6 Y_RNA.350-201ENST00000365409 98 ntBASIC3.42□□□□□ -1.86
CCDC66A2RUB6 RNU6-281P-201ENST00000384212 103 ntBASIC3.42□□□□□ -1.86
CCDC66A2RUB6 MIR183-201ENST00000384958 110 ntBASIC3.42□□□□□ -1.86
CCDC66A2RUB6 MIR34B-201ENST00000385076 84 ntBASIC3.42□□□□□ -1.86
CCDC66A2RUB6 SNORD12B-201ENST00000410433 91 ntBASIC3.42□□□□□ -1.86
CCDC66A2RUB6 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.42□□□□□ -1.86
CCDC66A2RUB6 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC66A2RUB6 HMGB1P35-201ENST00000503360 598 ntBASIC3.42□□□□□ -1.86
CCDC66A2RUB6 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC66A2RUB6 AC023824.2-201ENST00000566185 400 ntBASIC3.42□□□□□ -1.86
CCDC66A2RUB6 CYP4A27P-201ENST00000567218 190 ntBASIC3.42□□□□□ -1.86
CCDC66A2RUB6 AC136932.1-201ENST00000574771 208 ntBASIC3.42□□□□□ -1.86
CCDC66A2RUB6 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC66A2RUB6 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC66A2RUB6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC66A2RUB6 U6.105-201ENST00000637379 88 ntBASIC3.42□□□□□ -1.86
CCDC66A2RUB6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC66A2RUB6 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC66A2RUB6 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC66A2RUB6 Y_RNA.40-201ENST00000362645 93 ntBASIC3.41□□□□□ -1.86
CCDC66A2RUB6 Y_RNA.143-201ENST00000363520 106 ntBASIC3.41□□□□□ -1.86
CCDC66A2RUB6 RNU6-280P-201ENST00000364145 104 ntBASIC3.41□□□□□ -1.86
CCDC66A2RUB6 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC66A2RUB6 RNU2-38P-201ENST00000410856 79 ntBASIC3.41□□□□□ -1.86
CCDC66A2RUB6 AC096920.1-201ENST00000423991 241 ntBASIC3.41□□□□□ -1.86
CCDC66A2RUB6 AC098869.1-201ENST00000481627 292 ntBASIC3.41□□□□□ -1.86
CCDC66A2RUB6 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC66A2RUB6 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.41□□□□□ -1.86
CCDC66A2RUB6 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC66A2RUB6 AL034555.1-201ENST00000604816 211 ntBASIC3.41□□□□□ -1.86
CCDC66A2RUB6 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC66A2RUB6 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC66A2RUB6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
CCDC66A2RUB6 Y_RNA.14-201ENST00000362415 103 ntBASIC3.4□□□□□ -1.87
CCDC66A2RUB6 Y_RNA.84-201ENST00000363011 104 ntBASIC3.4□□□□□ -1.87
CCDC66A2RUB6 RNA5SP50-201ENST00000363731 107 ntBASIC3.4□□□□□ -1.87
CCDC66A2RUB6 RNU6-926P-201ENST00000384075 107 ntBASIC3.4□□□□□ -1.87
CCDC66A2RUB6 MIR23A-201ENST00000385245 73 ntBASIC3.4□□□□□ -1.87
CCDC66A2RUB6 RNU6-907P-201ENST00000390924 102 ntBASIC3.4□□□□□ -1.87
CCDC66A2RUB6 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC66A2RUB6 RNU2-25P-201ENST00000411041 191 ntBASIC3.4□□□□□ -1.87
CCDC66A2RUB6 RNU6-1001P-201ENST00000411265 100 ntBASIC3.4□□□□□ -1.87
CCDC66A2RUB6 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms