Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC189A1A4V9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC189A1A4V9 Y_RNA.132-201ENST00000363421 102 ntBASIC2.41□□□□□ -2.02
CCDC189A1A4V9 Y_RNA.212-201ENST00000364177 102 ntBASIC2.41□□□□□ -2.02
CCDC189A1A4V9 SNORD114-30-201ENST00000364448 72 ntBASIC2.41□□□□□ -2.02
CCDC189A1A4V9 RNU6-1013P-201ENST00000384180 107 ntBASIC2.41□□□□□ -2.02
CCDC189A1A4V9 Y_RNA.453-201ENST00000384223 109 ntBASIC2.41□□□□□ -2.02
CCDC189A1A4V9 RNA5SP338-201ENST00000410495 85 ntBASIC2.41□□□□□ -2.02
CCDC189A1A4V9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC189A1A4V9 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC189A1A4V9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC189A1A4V9 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC189A1A4V9 POLR3GP2-201ENST00000588366 668 ntBASIC2.41□□□□□ -2.02
CCDC189A1A4V9 AC023043.2-201ENST00000589678 1026 ntBASIC2.41□□□□□ -2.02
CCDC189A1A4V9 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC189A1A4V9 SNRPGP20-201ENST00000604477 205 ntBASIC2.41□□□□□ -2.02
CCDC189A1A4V9 AL033523.1-201ENST00000605153 153 ntBASIC2.41□□□□□ -2.02
CCDC189A1A4V9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC189A1A4V9 AL359851.1-201ENST00000569460 4997 ntBASIC2.41□□□□□ -2.02
CCDC189A1A4V9 CENPCP1-201ENST00000533085 2578 ntBASIC2.41□□□□□ -2.02
CCDC189A1A4V9 MIR21-201ENST00000362134 72 ntBASIC2.4□□□□□ -2.03
CCDC189A1A4V9 RNU6-534P-201ENST00000364877 106 ntBASIC2.4□□□□□ -2.03
CCDC189A1A4V9 Y_RNA.295-201ENST00000364918 102 ntBASIC2.4□□□□□ -2.03
CCDC189A1A4V9 SNORA18.2-201ENST00000383865 132 ntBASIC2.4□□□□□ -2.03
CCDC189A1A4V9 RNU6-95P-201ENST00000384697 107 ntBASIC2.4□□□□□ -2.03
CCDC189A1A4V9 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
CCDC189A1A4V9 AL359511.1-201ENST00000402970 211 ntBASIC2.4□□□□□ -2.03
CCDC189A1A4V9 SNRPEP8-201ENST00000442866 260 ntBASIC2.4□□□□□ -2.03
CCDC189A1A4V9 RNU7-187P-201ENST00000458985 68 ntBASIC2.4□□□□□ -2.03
CCDC189A1A4V9 RNA5SP57-201ENST00000459463 123 ntBASIC2.4□□□□□ -2.03
CCDC189A1A4V9 ACA59.1-201ENST00000515966 143 ntBASIC2.4□□□□□ -2.03
CCDC189A1A4V9 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC189A1A4V9 GTF3AP2-201ENST00000557014 266 ntBASIC2.4□□□□□ -2.03
CCDC189A1A4V9 MIR4713-201ENST00000582691 75 ntBASIC2.4□□□□□ -2.03
CCDC189A1A4V9 AP003465.2-201ENST00000602571 373 ntBASIC2.4□□□□□ -2.03
CCDC189A1A4V9 MIR7106-201ENST00000612419 65 ntBASIC2.4□□□□□ -2.03
CCDC189A1A4V9 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC189A1A4V9 AC090517.2-201ENST00000614966 680 ntBASIC2.4□□□□□ -2.03
CCDC189A1A4V9 TCL6_2.1-201ENST00000615162 119 ntBASIC2.4□□□□□ -2.03
CCDC189A1A4V9 MIR1291-201ENST00000627649 87 ntBASIC2.4□□□□□ -2.03
CCDC189A1A4V9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC189A1A4V9 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC189A1A4V9 RNU6-1252P-201ENST00000363054 104 ntBASIC2.39□□□□□ -2.03
CCDC189A1A4V9 RNA5SP68-201ENST00000363885 119 ntBASIC2.39□□□□□ -2.03
CCDC189A1A4V9 AC009310.1-201ENST00000414414 451 ntBASIC2.39□□□□□ -2.03
CCDC189A1A4V9 HMGN2P19-201ENST00000425149 265 ntBASIC2.39□□□□□ -2.03
CCDC189A1A4V9 AC027124.2-201ENST00000428249 105 ntBASIC2.39□□□□□ -2.03
CCDC189A1A4V9 AC112492.4-201ENST00000456549 352 ntBASIC2.39□□□□□ -2.03
CCDC189A1A4V9 AC007215.1-201ENST00000464893 276 ntBASIC2.39□□□□□ -2.03
CCDC189A1A4V9 RN7SL636P-201ENST00000497504 294 ntBASIC2.39□□□□□ -2.03
CCDC189A1A4V9 RNA5SP320-201ENST00000516263 124 ntBASIC2.39□□□□□ -2.03
CCDC189A1A4V9 RNU2-34P-201ENST00000516534 121 ntBASIC2.39□□□□□ -2.03
CCDC189A1A4V9 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC189A1A4V9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC189A1A4V9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC189A1A4V9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC189A1A4V9 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.39□□□□□ -2.03
CCDC189A1A4V9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC189A1A4V9 MTND4P5-201ENST00000435821 1374 ntBASIC2.38□□□□□ -2.03
CCDC189A1A4V9 SNORD114-6-201ENST00000364393 72 ntBASIC2.38□□□□□ -2.03
CCDC189A1A4V9 MIR676-201ENST00000390702 67 ntBASIC2.38□□□□□ -2.03
CCDC189A1A4V9 RNA5SP184-201ENST00000411071 108 ntBASIC2.38□□□□□ -2.03
CCDC189A1A4V9 AC139712.2-201ENST00000424302 339 ntBASIC2.38□□□□□ -2.03
CCDC189A1A4V9 AL357134.1-201ENST00000445848 426 ntBASIC2.38□□□□□ -2.03
CCDC189A1A4V9 AC104435.1-201ENST00000483483 166 ntBASIC2.38□□□□□ -2.03
CCDC189A1A4V9 MTCO2P30-201ENST00000503662 364 ntBASIC2.38□□□□□ -2.03
CCDC189A1A4V9 YWHAEP4-201ENST00000505390 198 ntBASIC2.38□□□□□ -2.03
CCDC189A1A4V9 RNA5SP24-201ENST00000516478 95 ntBASIC2.38□□□□□ -2.03
CCDC189A1A4V9 RNU2-44P-201ENST00000516795 194 ntBASIC2.38□□□□□ -2.03
CCDC189A1A4V9 SUMO2P18-201ENST00000518873 252 ntBASIC2.38□□□□□ -2.03
CCDC189A1A4V9 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC189A1A4V9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC189A1A4V9 MRPS36P4-201ENST00000534436 298 ntBASIC2.38□□□□□ -2.03
CCDC189A1A4V9 MIR4513-201ENST00000581077 86 ntBASIC2.38□□□□□ -2.03
CCDC189A1A4V9 MIR3976-201ENST00000606807 139 ntBASIC2.38□□□□□ -2.03
CCDC189A1A4V9 SCARNA4-201ENST00000629045 128 ntBASIC2.38□□□□□ -2.03
CCDC189A1A4V9 MIR3688-2-201ENST00000636963 87 ntBASIC2.38□□□□□ -2.03
CCDC189A1A4V9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC189A1A4V9 MIR518C-201ENST00000384822 101 ntBASIC2.37□□□□□ -2.03
CCDC189A1A4V9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CCDC189A1A4V9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC189A1A4V9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC189A1A4V9 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC189A1A4V9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC189A1A4V9 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC189A1A4V9 AC130509.1-201ENST00000464158 433 ntBASIC2.37□□□□□ -2.03
CCDC189A1A4V9 AC087477.1-201ENST00000465747 340 ntBASIC2.37□□□□□ -2.03
CCDC189A1A4V9 AC114982.1-201ENST00000469402 321 ntBASIC2.37□□□□□ -2.03
CCDC189A1A4V9 RPL23AP42-201ENST00000471152 471 ntBASIC2.37□□□□□ -2.03
CCDC189A1A4V9 AF186996.7-201ENST00000492781 209 ntBASIC2.37□□□□□ -2.03
CCDC189A1A4V9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC189A1A4V9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC189A1A4V9 RNU6-1198P-201ENST00000516904 67 ntBASIC2.37□□□□□ -2.03
CCDC189A1A4V9 RNU6-1314P-201ENST00000517139 104 ntBASIC2.37□□□□□ -2.03
CCDC189A1A4V9 AC022254.1-201ENST00000567857 235 ntBASIC2.37□□□□□ -2.03
CCDC189A1A4V9 MIR3672-201ENST00000584290 82 ntBASIC2.37□□□□□ -2.03
CCDC189A1A4V9 AP000907.4-201ENST00000604143 237 ntBASIC2.37□□□□□ -2.03
CCDC189A1A4V9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC189A1A4V9 AC116312.1-201ENST00000606841 314 ntBASIC2.37□□□□□ -2.03
CCDC189A1A4V9 uc_338.20-201ENST00000621563 178 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms