Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.54□□□□□ -2.16
CLRN2A0PK11 RSL24D1P11-201ENST00000591045 491 ntBASIC1.54□□□□□ -2.16
CLRN2A0PK11 AC002044.1-201ENST00000606707 158 ntBASIC1.54□□□□□ -2.16
CLRN2A0PK11 RNU4-21P-201ENST00000362802 126 ntBASIC1.53□□□□□ -2.16
CLRN2A0PK11 U3.4-201ENST00000363352 213 ntBASIC1.53□□□□□ -2.16
CLRN2A0PK11 RNU6-827P-201ENST00000365553 106 ntBASIC1.53□□□□□ -2.16
CLRN2A0PK11 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.53□□□□□ -2.16
CLRN2A0PK11 EBAG9P1-201ENST00000418955 543 ntBASIC1.53□□□□□ -2.16
CLRN2A0PK11 MTND2P18-201ENST00000419962 1030 ntBASIC1.53□□□□□ -2.16
CLRN2A0PK11 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.53□□□□□ -2.16
CLRN2A0PK11 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.53□□□□□ -2.16
CLRN2A0PK11 AC022364.2-201ENST00000457963 554 ntBASIC1.53□□□□□ -2.16
CLRN2A0PK11 RPL31P3-201ENST00000458430 332 ntBASIC1.53□□□□□ -2.16
CLRN2A0PK11 SCARNA18-201ENST00000459004 134 ntBASIC1.53□□□□□ -2.16
CLRN2A0PK11 MTND5P9-201ENST00000503854 1755 ntBASIC1.53□□□□□ -2.16
CLRN2A0PK11 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.53□□□□□ -2.16
CLRN2A0PK11 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.53□□□□□ -2.16
CLRN2A0PK11 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.53□□□□□ -2.16
CLRN2A0PK11 AP003034.1-201ENST00000534621 422 ntBASIC1.53□□□□□ -2.16
CLRN2A0PK11 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.53□□□□□ -2.16
CLRN2A0PK11 MIR4703-201ENST00000577728 79 ntBASIC1.53□□□□□ -2.16
CLRN2A0PK11 PRR13P7-201ENST00000605538 430 ntBASIC1.53□□□□□ -2.16
CLRN2A0PK11 AC008536.2-201ENST00000607284 349 ntBASIC1.53□□□□□ -2.16
CLRN2A0PK11 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.53□□□□□ -2.16
CLRN2A0PK11 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.53□□□□□ -2.17
CLRN2A0PK11 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
CLRN2A0PK11 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
CLRN2A0PK11 FGF7P2-201ENST00000332473 296 ntBASIC1.52□□□□□ -2.17
CLRN2A0PK11 RNU6-271P-201ENST00000363858 105 ntBASIC1.52□□□□□ -2.17
CLRN2A0PK11 Y_RNA.480-201ENST00000384364 102 ntBASIC1.52□□□□□ -2.17
CLRN2A0PK11 Y_RNA.504-201ENST00000384481 104 ntBASIC1.52□□□□□ -2.17
CLRN2A0PK11 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.52□□□□□ -2.17
CLRN2A0PK11 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.52□□□□□ -2.17
CLRN2A0PK11 SDAD1P3-201ENST00000427380 333 ntBASIC1.52□□□□□ -2.17
CLRN2A0PK11 AC078809.1-201ENST00000427601 140 ntBASIC1.52□□□□□ -2.17
CLRN2A0PK11 AC133104.1-201ENST00000429100 218 ntBASIC1.52□□□□□ -2.17
CLRN2A0PK11 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.52□□□□□ -2.17
CLRN2A0PK11 UBE2V1P8-201ENST00000437166 265 ntBASIC1.52□□□□□ -2.17
CLRN2A0PK11 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.52□□□□□ -2.17
CLRN2A0PK11 RPS27AP8-201ENST00000452665 445 ntBASIC1.52□□□□□ -2.17
CLRN2A0PK11 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.52□□□□□ -2.17
CLRN2A0PK11 RPS29P29-201ENST00000456396 171 ntBASIC1.52□□□□□ -2.17
CLRN2A0PK11 RPS29P23-201ENST00000458635 123 ntBASIC1.52□□□□□ -2.17
CLRN2A0PK11 SNORD42A-201ENST00000459584 64 ntBASIC1.52□□□□□ -2.17
CLRN2A0PK11 AC079382.1-201ENST00000493346 557 ntBASIC1.52□□□□□ -2.17
CLRN2A0PK11 AC093852.1-201ENST00000503587 266 ntBASIC1.52□□□□□ -2.17
CLRN2A0PK11 MTCYBP35-201ENST00000503630 1137 ntBASIC1.52□□□□□ -2.17
CLRN2A0PK11 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.52□□□□□ -2.17
CLRN2A0PK11 RNU2-69P-201ENST00000516061 100 ntBASIC1.52□□□□□ -2.17
CLRN2A0PK11 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.52□□□□□ -2.17
CLRN2A0PK11 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.52□□□□□ -2.17
CLRN2A0PK11 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.52□□□□□ -2.17
CLRN2A0PK11 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.52□□□□□ -2.17
CLRN2A0PK11 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.52□□□□□ -2.17
CLRN2A0PK11 AC012507.3-201ENST00000603556 477 ntBASIC1.52□□□□□ -2.17
CLRN2A0PK11 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.52□□□□□ -2.17
CLRN2A0PK11 MTND4P14-201ENST00000435799 1354 ntBASIC1.51□□□□□ -2.17
CLRN2A0PK11 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CLRN2A0PK11 RNU6-181P-201ENST00000363225 107 ntBASIC1.51□□□□□ -2.17
CLRN2A0PK11 RNU1-93P-201ENST00000364704 169 ntBASIC1.51□□□□□ -2.17
CLRN2A0PK11 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.51□□□□□ -2.17
CLRN2A0PK11 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.51□□□□□ -2.17
CLRN2A0PK11 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.51□□□□□ -2.17
CLRN2A0PK11 RNU6-445P-201ENST00000516949 107 ntBASIC1.51□□□□□ -2.17
CLRN2A0PK11 AP002963.1-201ENST00000530590 184 ntBASIC1.51□□□□□ -2.17
CLRN2A0PK11 AC016957.1-201ENST00000534895 309 ntBASIC1.51□□□□□ -2.17
CLRN2A0PK11 VN1R107P-201ENST00000601784 209 ntBASIC1.51□□□□□ -2.17
CLRN2A0PK11 AL356157.2-201ENST00000605122 111 ntBASIC1.51□□□□□ -2.17
CLRN2A0PK11 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
CLRN2A0PK11 AC022709.1-201ENST00000615967 87 ntBASIC1.51□□□□□ -2.17
CLRN2A0PK11 uc_338.11-201ENST00000619132 160 ntBASIC1.51□□□□□ -2.17
CLRN2A0PK11 MIR8063-201ENST00000621930 81 ntBASIC1.51□□□□□ -2.17
CLRN2A0PK11 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.51□□□□□ -2.17
CLRN2A0PK11 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CLRN2A0PK11 AL390237.1-201ENST00000404226 1415 ntBASIC1.5□□□□□ -2.17
CLRN2A0PK11 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
CLRN2A0PK11 AC092268.1-201ENST00000342691 405 ntBASIC1.5□□□□□ -2.17
CLRN2A0PK11 U3.9-201ENST00000363823 204 ntBASIC1.5□□□□□ -2.17
CLRN2A0PK11 SNORA32.2-201ENST00000384049 122 ntBASIC1.5□□□□□ -2.17
CLRN2A0PK11 RNU6-296P-201ENST00000384608 107 ntBASIC1.5□□□□□ -2.17
CLRN2A0PK11 MIR520E-201ENST00000384867 87 ntBASIC1.5□□□□□ -2.17
CLRN2A0PK11 SNORA16.2-201ENST00000390991 127 ntBASIC1.5□□□□□ -2.17
CLRN2A0PK11 RNU6-955P-201ENST00000410497 104 ntBASIC1.5□□□□□ -2.17
CLRN2A0PK11 RN7SKP61-201ENST00000410642 295 ntBASIC1.5□□□□□ -2.17
CLRN2A0PK11 RNU2-7P-201ENST00000410794 178 ntBASIC1.5□□□□□ -2.17
CLRN2A0PK11 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.5□□□□□ -2.17
CLRN2A0PK11 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.5□□□□□ -2.17
CLRN2A0PK11 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.5□□□□□ -2.17
CLRN2A0PK11 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.5□□□□□ -2.17
CLRN2A0PK11 FTH1P12-201ENST00000432137 551 ntBASIC1.5□□□□□ -2.17
CLRN2A0PK11 MTND1P27-201ENST00000451117 902 ntBASIC1.5□□□□□ -2.17
CLRN2A0PK11 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.5□□□□□ -2.17
CLRN2A0PK11 RNA5SP269-201ENST00000459032 137 ntBASIC1.5□□□□□ -2.17
CLRN2A0PK11 RNU7-14P-201ENST00000459331 62 ntBASIC1.5□□□□□ -2.17
CLRN2A0PK11 MTCO3P28-201ENST00000513351 515 ntBASIC1.5□□□□□ -2.17
CLRN2A0PK11 RNU5F-4P-201ENST00000516581 114 ntBASIC1.5□□□□□ -2.17
CLRN2A0PK11 RNU6-902P-201ENST00000517212 91 ntBASIC1.5□□□□□ -2.17
CLRN2A0PK11 AP003072.2-201ENST00000527756 676 ntBASIC1.5□□□□□ -2.17
CLRN2A0PK11 SUB1P2-201ENST00000556401 297 ntBASIC1.5□□□□□ -2.17
CLRN2A0PK11 MTATP6P24-201ENST00000576835 677 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms