Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RN7SKP101-201ENST00000411376 320 ntBASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 AL590135.1-201ENST00000422215 156 ntBASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 AC019205.3-201ENST00000424573 156 ntBASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 ERLEC1P1-201ENST00000433806 578 ntBASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 AC244670.1-201ENST00000436879 112 ntBASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 AC016700.2-201ENST00000446011 156 ntBASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 RPS29P27-201ENST00000463711 170 ntBASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 AC015911.1-201ENST00000495111 156 ntBASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 AC145146.1-201ENST00000496370 254 ntBASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 MIR449C-201ENST00000516047 92 ntBASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 AC022616.8-201ENST00000533569 253 ntBASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 TRAV32-201ENST00000553993 340 ntBASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 AC012557.2-201ENST00000605919 418 ntBASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 AL627230.6-201ENST00000611129 280 ntBASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 AC091932.3-201ENST00000624223 323 ntBASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 MIR1248-201ENST00000629190 106 ntBASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 AC121333.1-201ENST00000567488 2709 ntBASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 AP000560.1-201ENST00000624150 1937 ntBASIC1.72□□□□□ -2.13
SMIM28A0A1B0GU29 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.71□□□□□ -2.14
SMIM28A0A1B0GU29 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.71□□□□□ -2.14
SMIM28A0A1B0GU29 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SMIM28A0A1B0GU29 RNU6-743P-201ENST00000364151 106 ntBASIC1.71□□□□□ -2.14
SMIM28A0A1B0GU29 SNORD32B-201ENST00000364460 84 ntBASIC1.71□□□□□ -2.14
SMIM28A0A1B0GU29 RNU6-1329P-201ENST00000365664 107 ntBASIC1.71□□□□□ -2.14
SMIM28A0A1B0GU29 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SMIM28A0A1B0GU29 SNORA40.19-201ENST00000390846 128 ntBASIC1.71□□□□□ -2.14
SMIM28A0A1B0GU29 Y_RNA.615-201ENST00000410769 117 ntBASIC1.71□□□□□ -2.14
SMIM28A0A1B0GU29 AP000275.1-201ENST00000411943 390 ntBASIC1.71□□□□□ -2.14
SMIM28A0A1B0GU29 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.71□□□□□ -2.14
SMIM28A0A1B0GU29 BX510359.4-201ENST00000423750 193 ntBASIC1.71□□□□□ -2.14
SMIM28A0A1B0GU29 HMGN2P38-201ENST00000423806 265 ntBASIC1.71□□□□□ -2.14
SMIM28A0A1B0GU29 MTCO2P3-201ENST00000442543 421 ntBASIC1.71□□□□□ -2.14
SMIM28A0A1B0GU29 PRELID3BP1-201ENST00000457142 540 ntBASIC1.71□□□□□ -2.14
SMIM28A0A1B0GU29 RN7SKP210-201ENST00000459176 261 ntBASIC1.71□□□□□ -2.14
SMIM28A0A1B0GU29 RNU7-66P-201ENST00000459469 62 ntBASIC1.71□□□□□ -2.14
SMIM28A0A1B0GU29 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.71□□□□□ -2.14
SMIM28A0A1B0GU29 AC008628.2-201ENST00000502605 298 ntBASIC1.71□□□□□ -2.14
SMIM28A0A1B0GU29 AC091885.1-201ENST00000506658 268 ntBASIC1.71□□□□□ -2.14
SMIM28A0A1B0GU29 Y_RNA.655-201ENST00000515919 96 ntBASIC1.71□□□□□ -2.14
SMIM28A0A1B0GU29 AC115990.1-201ENST00000526957 301 ntBASIC1.71□□□□□ -2.14
SMIM28A0A1B0GU29 uc_338.20-201ENST00000621563 178 ntBASIC1.71□□□□□ -2.14
SMIM28A0A1B0GU29 MIR1321-201ENST00000637766 79 ntBASIC1.71□□□□□ -2.14
SMIM28A0A1B0GU29 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SMIM28A0A1B0GU29 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
SMIM28A0A1B0GU29 RNA5SP201-201ENST00000410316 124 ntBASIC1.7□□□□□ -2.14
SMIM28A0A1B0GU29 BTF3P4-201ENST00000418852 495 ntBASIC1.7□□□□□ -2.14
SMIM28A0A1B0GU29 MTCO1P20-201ENST00000425366 358 ntBASIC1.7□□□□□ -2.14
SMIM28A0A1B0GU29 AL133396.1-201ENST00000432048 687 ntBASIC1.7□□□□□ -2.14
SMIM28A0A1B0GU29 MTND3P21-201ENST00000433774 331 ntBASIC1.7□□□□□ -2.14
SMIM28A0A1B0GU29 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.7□□□□□ -2.14
SMIM28A0A1B0GU29 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.7□□□□□ -2.14
SMIM28A0A1B0GU29 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.7□□□□□ -2.14
SMIM28A0A1B0GU29 AC092436.3-201ENST00000511788 257 ntBASIC1.7□□□□□ -2.14
SMIM28A0A1B0GU29 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.7□□□□□ -2.14
SMIM28A0A1B0GU29 RNU6-612P-201ENST00000516909 102 ntBASIC1.7□□□□□ -2.14
SMIM28A0A1B0GU29 AC087854.1-201ENST00000519706 414 ntBASIC1.7□□□□□ -2.14
SMIM28A0A1B0GU29 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.7□□□□□ -2.14
SMIM28A0A1B0GU29 AL157687.1-201ENST00000554853 619 ntBASIC1.7□□□□□ -2.14
SMIM28A0A1B0GU29 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.7□□□□□ -2.14
SMIM28A0A1B0GU29 AL109918.3-201ENST00000603072 338 ntBASIC1.7□□□□□ -2.14
SMIM28A0A1B0GU29 AC005034.5-201ENST00000604219 466 ntBASIC1.7□□□□□ -2.14
SMIM28A0A1B0GU29 AL645939.4-201ENST00000604495 135 ntBASIC1.7□□□□□ -2.14
SMIM28A0A1B0GU29 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.7□□□□□ -2.14
SMIM28A0A1B0GU29 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.7□□□□□ -2.14
SMIM28A0A1B0GU29 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.7□□□□□ -2.14
SMIM28A0A1B0GU29 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 SNORD115-3-201ENST00000363100 82 ntBASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 RNU1-42P-201ENST00000364033 160 ntBASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 RNU6-1317P-201ENST00000364582 104 ntBASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 RNU6-60P-201ENST00000364792 103 ntBASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 RNU6-611P-201ENST00000384276 104 ntBASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 Y_RNA.504-201ENST00000384481 104 ntBASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 MIR518A2-201ENST00000384966 87 ntBASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 EIF4E2P1-201ENST00000393781 255 ntBASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 MIR1283-2-201ENST00000408621 87 ntBASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 RNA5SP450-201ENST00000411206 102 ntBASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 AL359672.1-201ENST00000442302 409 ntBASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 AL137159.1-201ENST00000452808 512 ntBASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 AMD1P1-201ENST00000457220 922 ntBASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 PMCHL2-203ENST00000457791 237 ntBASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 AC022447.4-201ENST00000504053 364 ntBASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 AC091435.1-201ENST00000505442 584 ntBASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 MRPS17P9-201ENST00000511924 393 ntBASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 SNORD53B-201ENST00000577887 78 ntBASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 MIR3136-201ENST00000583498 78 ntBASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 AL096840.1-201ENST00000603287 93 ntBASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 Z98751.3-201ENST00000604447 521 ntBASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 DISC2.1-201ENST00000612827 205 ntBASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 AC024614.3-201ENST00000637860 256 ntBASIC1.69□□□□□ -2.14
SMIM28A0A1B0GU29 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms