Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 MIR4315-2-201ENST00000640925 73 ntBASIC-0.1□□□□□ -2.43
TRAV1-2A0A0B4J238 BX322639.1-202ENST00000423987 2213 ntBASIC-0.1□□□□□ -2.43
TRAV1-2A0A0B4J238 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 RNU4-76P-201ENST00000364509 141 ntBASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 RNU6-384P-201ENST00000364900 104 ntBASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 RNU6-877P-201ENST00000383868 107 ntBASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 RNU6-883P-201ENST00000384597 107 ntBASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 SNORA12.1-201ENST00000390873 148 ntBASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 RNU6-278P-201ENST00000390945 109 ntBASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 RNU2-70P-201ENST00000410718 179 ntBASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 MTCYBP10-201ENST00000424905 650 ntBASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 AP000542.1-201ENST00000448473 371 ntBASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 AC007547.1-201ENST00000462177 490 ntBASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 RNY4P37-201ENST00000516225 96 ntBASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 RNU6-551P-201ENST00000516661 103 ntBASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 RNU6-677P-201ENST00000516914 101 ntBASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 MTCO3P15-201ENST00000526563 574 ntBASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 MIR4514-201ENST00000581410 57 ntBASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 AC131055.1-201ENST00000584626 316 ntBASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 AC136475.10-201ENST00000620253 385 ntBASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 SNORD98-201ENST00000636377 67 ntBASIC-0.11□□□□□ -2.43
TRAV1-2A0A0B4J238 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.12□□□□□ -2.43
TRAV1-2A0A0B4J238 RNA5SP62-201ENST00000363457 110 ntBASIC-0.12□□□□□ -2.43
TRAV1-2A0A0B4J238 RNU6-777P-201ENST00000364265 104 ntBASIC-0.12□□□□□ -2.43
TRAV1-2A0A0B4J238 SNORD114-9-201ENST00000364370 72 ntBASIC-0.12□□□□□ -2.43
TRAV1-2A0A0B4J238 AC083799.1-201ENST00000366451 910 ntBASIC-0.12□□□□□ -2.43
TRAV1-2A0A0B4J238 AL603865.2-201ENST00000401679 213 ntBASIC-0.12□□□□□ -2.43
TRAV1-2A0A0B4J238 BX664727.1-201ENST00000416024 466 ntBASIC-0.12□□□□□ -2.43
TRAV1-2A0A0B4J238 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.12□□□□□ -2.43
TRAV1-2A0A0B4J238 AL162725.1-201ENST00000435405 301 ntBASIC-0.12□□□□□ -2.43
TRAV1-2A0A0B4J238 AC104332.1-201ENST00000440471 797 ntBASIC-0.12□□□□□ -2.43
TRAV1-2A0A0B4J238 AL133217.1-201ENST00000450980 425 ntBASIC-0.12□□□□□ -2.43
TRAV1-2A0A0B4J238 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC-0.12□□□□□ -2.43
TRAV1-2A0A0B4J238 RPL39P39-201ENST00000455840 151 ntBASIC-0.12□□□□□ -2.43
TRAV1-2A0A0B4J238 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.12□□□□□ -2.43
TRAV1-2A0A0B4J238 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.12□□□□□ -2.43
TRAV1-2A0A0B4J238 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC-0.12□□□□□ -2.43
TRAV1-2A0A0B4J238 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.12□□□□□ -2.43
TRAV1-2A0A0B4J238 AC069545.1-201ENST00000605671 358 ntBASIC-0.12□□□□□ -2.43
TRAV1-2A0A0B4J238 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.12□□□□□ -2.43
TRAV1-2A0A0B4J238 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.12□□□□□ -2.43
TRAV1-2A0A0B4J238 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
TRAV1-2A0A0B4J238 RNU1-76P-201ENST00000362903 159 ntBASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 Y_RNA.132-201ENST00000363421 102 ntBASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 SNORA42.1-201ENST00000363515 137 ntBASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 RNU5A-8P-201ENST00000364102 114 ntBASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 RNA5SP504-201ENST00000410676 117 ntBASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 RSL24D1P8-201ENST00000434442 492 ntBASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 AL596276.1-201ENST00000434465 418 ntBASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 AC093534.1-201ENST00000504977 132 ntBASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 AC024995.1-201ENST00000523014 93 ntBASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 AP002001.1-203ENST00000534002 267 ntBASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 AC109810.1-201ENST00000534066 224 ntBASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 SUB1P2-201ENST00000556401 297 ntBASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 AC008752.3-201ENST00000588113 712 ntBASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 AL606834.3-201ENST00000602615 496 ntBASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 AC004987.4-201ENST00000603383 338 ntBASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 AL357312.1-201ENST00000603879 298 ntBASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 AL391903.3-201ENST00000612158 163 ntBASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 MIR6718-201ENST00000616153 80 ntBASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 OR5AK4P-201ENST00000635912 903 ntBASIC-0.13□□□□□ -2.43
TRAV1-2A0A0B4J238 SNORA63.3-201ENST00000362682 132 ntBASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 RNU6-418P-201ENST00000384035 107 ntBASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 MIR660-201ENST00000385235 97 ntBASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 RPS20P2-201ENST00000402520 389 ntBASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 RN7SKP200-201ENST00000410564 320 ntBASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 AL953862.1-201ENST00000423016 168 ntBASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 MTCO1P19-201ENST00000443487 500 ntBASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 AC109445.1-201ENST00000512356 383 ntBASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 MTND2P7-201ENST00000521337 640 ntBASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 AC016256.1-201ENST00000547971 354 ntBASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 ZNF321P-202ENST00000550843 495 ntBASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 MTND1P15-201ENST00000579262 949 ntBASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 MIR4290-201ENST00000583807 95 ntBASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 AC004223.2-201ENST00000590309 544 ntBASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 AC090517.2-201ENST00000614966 680 ntBASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 AC022709.1-201ENST00000615967 87 ntBASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 AC078938.1-201ENST00000620993 318 ntBASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 AC006927.4-201ENST00000639187 543 ntBASIC-0.14□□□□□ -2.43
TRAV1-2A0A0B4J238 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.15□□□□□ -2.43
TRAV1-2A0A0B4J238 AL451046.2-201ENST00000403074 277 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms