Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SNORD67-201ENST00000390833 111 ntBASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 SNORD58.1-201ENST00000391313 66 ntBASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 RNU6-121P-201ENST00000410525 99 ntBASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 SEM1P1-201ENST00000506694 209 ntBASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 RNU6-789P-201ENST00000517105 102 ntBASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 CBX3P8-201ENST00000532412 525 ntBASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 RRN3P3-201ENST00000549207 578 ntBASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 AC090897.2-201ENST00000581715 130 ntBASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 AC012433.1-201ENST00000588916 398 ntBASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 AC010620.2-201ENST00000600135 313 ntBASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 AC009779.6-201ENST00000603972 165 ntBASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 FTX_2.1-201ENST00000618816 94 ntBASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 AC091903.1-201ENST00000624322 454 ntBASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC187A0A096LP49 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 MIR148B-201ENST00000362252 99 ntBASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 SNORD50.1-201ENST00000362987 71 ntBASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 Y_RNA.123-201ENST00000363338 102 ntBASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 Y_RNA.478-201ENST00000384358 107 ntBASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 MIR544A-201ENST00000384855 91 ntBASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 AL353997.1-201ENST00000432936 108 ntBASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 AC004383.1-201ENST00000438135 289 ntBASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 AL031659.1-201ENST00000447075 539 ntBASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 LINC01399-202ENST00000458450 244 ntBASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 RPS29P26-201ENST00000477483 171 ntBASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 MRPS36P2-201ENST00000512569 299 ntBASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 Y_RNA.700-201ENST00000516806 100 ntBASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 RN7SKP282-201ENST00000516824 299 ntBASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 RNU6-897P-201ENST00000517135 105 ntBASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 MIR5696-201ENST00000578474 85 ntBASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 AP001282.2-201ENST00000616149 309 ntBASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 AC009541.1-201ENST00000438279 2662 ntBASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
CCDC187A0A096LP49 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC187A0A096LP49 MIR449A-201ENST00000362113 91 ntBASIC2.9□□□□□ -1.95
CCDC187A0A096LP49 Y_RNA.19-201ENST00000362462 99 ntBASIC2.9□□□□□ -1.95
CCDC187A0A096LP49 Y_RNA.48-201ENST00000362710 103 ntBASIC2.9□□□□□ -1.95
CCDC187A0A096LP49 RNY1-201ENST00000364228 113 ntBASIC2.9□□□□□ -1.95
CCDC187A0A096LP49 SNORD32A-201ENST00000364805 84 ntBASIC2.9□□□□□ -1.95
CCDC187A0A096LP49 Y_RNA.462-201ENST00000384268 102 ntBASIC2.9□□□□□ -1.95
CCDC187A0A096LP49 RNU6-130P-201ENST00000411112 103 ntBASIC2.9□□□□□ -1.95
CCDC187A0A096LP49 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC187A0A096LP49 MTCO3P8-201ENST00000453691 755 ntBASIC2.9□□□□□ -1.95
CCDC187A0A096LP49 RNA5SP385-201ENST00000515947 110 ntBASIC2.9□□□□□ -1.95
CCDC187A0A096LP49 AC107016.2-201ENST00000547968 190 ntBASIC2.9□□□□□ -1.95
CCDC187A0A096LP49 MIR5701-3-201ENST00000578890 82 ntBASIC2.9□□□□□ -1.95
CCDC187A0A096LP49 MIR4506-201ENST00000584693 77 ntBASIC2.9□□□□□ -1.95
CCDC187A0A096LP49 MIR5701-1-201ENST00000585138 82 ntBASIC2.9□□□□□ -1.95
CCDC187A0A096LP49 VN1R91P-201ENST00000594377 169 ntBASIC2.9□□□□□ -1.95
CCDC187A0A096LP49 AL158827.2-201ENST00000602494 330 ntBASIC2.9□□□□□ -1.95
CCDC187A0A096LP49 AC009318.2-201ENST00000610917 651 ntBASIC2.9□□□□□ -1.95
CCDC187A0A096LP49 MIR5701-2-201ENST00000615634 82 ntBASIC2.9□□□□□ -1.95
CCDC187A0A096LP49 AL159153.1-201ENST00000619688 317 ntBASIC2.9□□□□□ -1.95
CCDC187A0A096LP49 AL691447.3-201ENST00000635020 330 ntBASIC2.9□□□□□ -1.95
CCDC187A0A096LP49 ZNF299P-201ENST00000406845 1804 ntBASIC2.9□□□□□ -1.95
CCDC187A0A096LP49 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC187A0A096LP49 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
CCDC187A0A096LP49 MTND5P6-201ENST00000422338 1798 ntBASIC2.89□□□□□ -1.95
CCDC187A0A096LP49 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC187A0A096LP49 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC187A0A096LP49 RNY1P16-201ENST00000363063 111 ntBASIC2.89□□□□□ -1.95
CCDC187A0A096LP49 RNU6-1141P-201ENST00000364520 107 ntBASIC2.89□□□□□ -1.95
CCDC187A0A096LP49 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC187A0A096LP49 RNU6-611P-201ENST00000384276 104 ntBASIC2.89□□□□□ -1.95
CCDC187A0A096LP49 RNU6-851P-201ENST00000384565 107 ntBASIC2.89□□□□□ -1.95
CCDC187A0A096LP49 Y_RNA.533-201ENST00000384596 114 ntBASIC2.89□□□□□ -1.95
CCDC187A0A096LP49 SNORA19-201ENST00000384737 128 ntBASIC2.89□□□□□ -1.95
CCDC187A0A096LP49 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CCDC187A0A096LP49 PCNPP3-201ENST00000393579 471 ntBASIC2.89□□□□□ -1.95
CCDC187A0A096LP49 AL512633.1-201ENST00000399931 655 ntBASIC2.89□□□□□ -1.95
CCDC187A0A096LP49 RPL21P38-201ENST00000418090 167 ntBASIC2.89□□□□□ -1.95
CCDC187A0A096LP49 EIF1AXP1-201ENST00000419267 435 ntBASIC2.89□□□□□ -1.95
CCDC187A0A096LP49 PIGPP3-201ENST00000425307 415 ntBASIC2.89□□□□□ -1.95
CCDC187A0A096LP49 RPL23AP95-201ENST00000426806 265 ntBASIC2.89□□□□□ -1.95
CCDC187A0A096LP49 AC105272.1-201ENST00000438604 198 ntBASIC2.89□□□□□ -1.95
CCDC187A0A096LP49 AL135938.1-201ENST00000443141 297 ntBASIC2.89□□□□□ -1.95
CCDC187A0A096LP49 AC079354.2-201ENST00000453523 154 ntBASIC2.89□□□□□ -1.95
CCDC187A0A096LP49 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC187A0A096LP49 RPS26P21-201ENST00000475397 348 ntBASIC2.89□□□□□ -1.95
CCDC187A0A096LP49 SCGB1D5P-201ENST00000515134 247 ntBASIC2.89□□□□□ -1.95
CCDC187A0A096LP49 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC187A0A096LP49 AP003733.2-201ENST00000529409 171 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms