Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.56□□□□□ -1.68
GTF3C3Q9Y5Q9 SNORA40.9-201ENST00000515895 93 ntBASIC4.56□□□□□ -1.68
GTF3C3Q9Y5Q9 MIR449C-201ENST00000516047 92 ntBASIC4.56□□□□□ -1.68
GTF3C3Q9Y5Q9 DEFB131C-201ENST00000528817 165 ntBASIC4.56□□□□□ -1.68
GTF3C3Q9Y5Q9 RRN3P3-201ENST00000549207 578 ntBASIC4.56□□□□□ -1.68
GTF3C3Q9Y5Q9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.56□□□□□ -1.68
GTF3C3Q9Y5Q9 AC008269.2-201ENST00000561915 1105 ntBASIC4.56□□□□□ -1.68
GTF3C3Q9Y5Q9 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.56□□□□□ -1.68
GTF3C3Q9Y5Q9 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.56□□□□□ -1.68
GTF3C3Q9Y5Q9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.56□□□□□ -1.68
GTF3C3Q9Y5Q9 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC4.56□□□□□ -1.68
GTF3C3Q9Y5Q9 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.56□□□□□ -1.68
GTF3C3Q9Y5Q9 Y_RNA.210-201ENST00000364161 110 ntBASIC4.55□□□□□ -1.68
GTF3C3Q9Y5Q9 AC016397.1-201ENST00000412463 242 ntBASIC4.55□□□□□ -1.68
GTF3C3Q9Y5Q9 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.55□□□□□ -1.68
GTF3C3Q9Y5Q9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.55□□□□□ -1.68
GTF3C3Q9Y5Q9 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.55□□□□□ -1.68
GTF3C3Q9Y5Q9 RN7SL610P-201ENST00000463845 291 ntBASIC4.55□□□□□ -1.68
GTF3C3Q9Y5Q9 AC114982.1-201ENST00000469402 321 ntBASIC4.55□□□□□ -1.68
GTF3C3Q9Y5Q9 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.55□□□□□ -1.68
GTF3C3Q9Y5Q9 RNU6-965P-201ENST00000516721 96 ntBASIC4.55□□□□□ -1.68
GTF3C3Q9Y5Q9 SCARNA14-201ENST00000516903 136 ntBASIC4.55□□□□□ -1.68
GTF3C3Q9Y5Q9 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
GTF3C3Q9Y5Q9 AC006133.1-201ENST00000617106 264 ntBASIC4.55□□□□□ -1.68
GTF3C3Q9Y5Q9 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.55□□□□□ -1.68
GTF3C3Q9Y5Q9 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GTF3C3Q9Y5Q9 AC091953.3-201ENST00000623220 236 ntBASIC4.55□□□□□ -1.68
GTF3C3Q9Y5Q9 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.55□□□□□ -1.68
GTF3C3Q9Y5Q9 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
GTF3C3Q9Y5Q9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
GTF3C3Q9Y5Q9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
GTF3C3Q9Y5Q9 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
GTF3C3Q9Y5Q9 Y_RNA.149-201ENST00000363558 117 ntBASIC4.54□□□□□ -1.68
GTF3C3Q9Y5Q9 RNU6-727P-201ENST00000363592 107 ntBASIC4.54□□□□□ -1.68
GTF3C3Q9Y5Q9 SNORA38-201ENST00000363946 132 ntBASIC4.54□□□□□ -1.68
GTF3C3Q9Y5Q9 SNORA51.4-201ENST00000364993 124 ntBASIC4.54□□□□□ -1.68
GTF3C3Q9Y5Q9 RNA5SP97-201ENST00000365006 84 ntBASIC4.54□□□□□ -1.68
GTF3C3Q9Y5Q9 RNU6-398P-201ENST00000384143 109 ntBASIC4.54□□□□□ -1.68
GTF3C3Q9Y5Q9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.54□□□□□ -1.68
GTF3C3Q9Y5Q9 AC009238.1-201ENST00000442165 424 ntBASIC4.54□□□□□ -1.68
GTF3C3Q9Y5Q9 AC009237.6-201ENST00000446969 424 ntBASIC4.54□□□□□ -1.68
GTF3C3Q9Y5Q9 NDUFB4P10-201ENST00000452541 359 ntBASIC4.54□□□□□ -1.68
GTF3C3Q9Y5Q9 RPPH1-2P-201ENST00000516688 293 ntBASIC4.54□□□□□ -1.68
GTF3C3Q9Y5Q9 MIR4753-201ENST00000585119 83 ntBASIC4.54□□□□□ -1.68
GTF3C3Q9Y5Q9 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
GTF3C3Q9Y5Q9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
GTF3C3Q9Y5Q9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
GTF3C3Q9Y5Q9 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
GTF3C3Q9Y5Q9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
GTF3C3Q9Y5Q9 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
GTF3C3Q9Y5Q9 RNU1-23P-201ENST00000363361 144 ntBASIC4.53□□□□□ -1.68
GTF3C3Q9Y5Q9 SNORA58B-201ENST00000364259 136 ntBASIC4.53□□□□□ -1.68
GTF3C3Q9Y5Q9 SNORD31B-201ENST00000364977 69 ntBASIC4.53□□□□□ -1.68
GTF3C3Q9Y5Q9 RNU6-1105P-201ENST00000384774 107 ntBASIC4.53□□□□□ -1.68
GTF3C3Q9Y5Q9 MIR586-201ENST00000385035 97 ntBASIC4.53□□□□□ -1.68
GTF3C3Q9Y5Q9 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.53□□□□□ -1.68
GTF3C3Q9Y5Q9 AC115115.1-201ENST00000449927 248 ntBASIC4.53□□□□□ -1.68
GTF3C3Q9Y5Q9 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.53□□□□□ -1.68
GTF3C3Q9Y5Q9 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.53□□□□□ -1.68
GTF3C3Q9Y5Q9 UQCRHP4-201ENST00000471686 272 ntBASIC4.53□□□□□ -1.68
GTF3C3Q9Y5Q9 SLC25A15P5-201ENST00000508033 253 ntBASIC4.53□□□□□ -1.68
GTF3C3Q9Y5Q9 RNU6-408P-201ENST00000515910 100 ntBASIC4.53□□□□□ -1.68
GTF3C3Q9Y5Q9 RNA5SP164-201ENST00000516533 110 ntBASIC4.53□□□□□ -1.68
GTF3C3Q9Y5Q9 RNU1-117P-201ENST00000517041 158 ntBASIC4.53□□□□□ -1.68
GTF3C3Q9Y5Q9 RNU6-897P-201ENST00000517135 105 ntBASIC4.53□□□□□ -1.68
GTF3C3Q9Y5Q9 AP002404.1-201ENST00000532005 451 ntBASIC4.53□□□□□ -1.68
GTF3C3Q9Y5Q9 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.53□□□□□ -1.68
GTF3C3Q9Y5Q9 AC018448.1-201ENST00000552843 316 ntBASIC4.53□□□□□ -1.68
GTF3C3Q9Y5Q9 MIR4480-201ENST00000582492 71 ntBASIC4.53□□□□□ -1.68
GTF3C3Q9Y5Q9 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.53□□□□□ -1.68
GTF3C3Q9Y5Q9 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
GTF3C3Q9Y5Q9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GTF3C3Q9Y5Q9 Y_RNA.462-201ENST00000384268 102 ntBASIC4.52□□□□□ -1.69
GTF3C3Q9Y5Q9 RNU6-1109P-201ENST00000391187 107 ntBASIC4.52□□□□□ -1.69
GTF3C3Q9Y5Q9 MIR1302-3-201ENST00000408128 138 ntBASIC4.52□□□□□ -1.69
GTF3C3Q9Y5Q9 RNU5A-5P-201ENST00000411054 116 ntBASIC4.52□□□□□ -1.69
GTF3C3Q9Y5Q9 RPL23AP67-201ENST00000465341 474 ntBASIC4.52□□□□□ -1.69
GTF3C3Q9Y5Q9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.52□□□□□ -1.69
GTF3C3Q9Y5Q9 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
GTF3C3Q9Y5Q9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.52□□□□□ -1.69
GTF3C3Q9Y5Q9 RNA5SP76-201ENST00000516277 87 ntBASIC4.52□□□□□ -1.69
GTF3C3Q9Y5Q9 RNU6-1046P-201ENST00000516538 107 ntBASIC4.52□□□□□ -1.69
GTF3C3Q9Y5Q9 RNU6-635P-201ENST00000516651 102 ntBASIC4.52□□□□□ -1.69
GTF3C3Q9Y5Q9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.52□□□□□ -1.69
GTF3C3Q9Y5Q9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.52□□□□□ -1.69
GTF3C3Q9Y5Q9 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.52□□□□□ -1.69
GTF3C3Q9Y5Q9 MIR6733-201ENST00000635723 61 ntBASIC4.52□□□□□ -1.69
GTF3C3Q9Y5Q9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.52□□□□□ -1.69
GTF3C3Q9Y5Q9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.52□□□□□ -1.69
GTF3C3Q9Y5Q9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
GTF3C3Q9Y5Q9 AL021368.2-201ENST00000606125 5352 ntBASIC4.52□□□□□ -1.69
GTF3C3Q9Y5Q9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GTF3C3Q9Y5Q9 AC073346.2-201ENST00000624724 2058 ntBASIC4.52□□□□□ -1.69
GTF3C3Q9Y5Q9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GTF3C3Q9Y5Q9 AP006437.1-201ENST00000641440 3685 ntBASIC4.51□□□□□ -1.69
GTF3C3Q9Y5Q9 MIR383-201ENST00000362257 73 ntBASIC4.51□□□□□ -1.69
GTF3C3Q9Y5Q9 RNU6-770P-201ENST00000363929 105 ntBASIC4.51□□□□□ -1.69
GTF3C3Q9Y5Q9 MIR181B1-201ENST00000385240 110 ntBASIC4.51□□□□□ -1.69
GTF3C3Q9Y5Q9 RNA5SP475-201ENST00000410568 110 ntBASIC4.51□□□□□ -1.69
GTF3C3Q9Y5Q9 RN7SKP58-201ENST00000411010 305 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 153.4 ms