Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 AC073410.2-201ENST00000603240 332 ntBASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 AL355297.3-201ENST00000604082 446 ntBASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 AC124312.5-201ENST00000604451 268 ntBASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 AL138963.2-201ENST00000605137 226 ntBASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 AL021879.1-201ENST00000611756 288 ntBASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 SNORA50A-202ENST00000629536 136 ntBASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
PCDHA13Q9Y5I0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 RNU6-1210P-201ENST00000363775 107 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 Y_RNA.551-201ENST00000384661 102 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 Y_RNA.557-201ENST00000384680 107 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 MIR628-201ENST00000385229 95 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 U3.19-201ENST00000390893 196 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 RNU1-139P-201ENST00000391307 165 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 RPL21P75-201ENST00000396599 483 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 RPL21P28-201ENST00000401418 483 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 CBX3P9-201ENST00000402326 552 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 AL356057.3-201ENST00000402607 340 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 HMGB3P2-201ENST00000411913 584 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 AL590556.1-201ENST00000423231 483 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 MTCO3P8-201ENST00000453691 755 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 AP000705.1-201ENST00000454567 350 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 RPL21P39-201ENST00000463605 483 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 AC087190.1-201ENST00000484462 480 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 AC107032.1-201ENST00000485945 480 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 AC132942.1-201ENST00000486753 483 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 AC093591.1-201ENST00000491435 481 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 RPL21P16-201ENST00000495531 483 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 AL442163.3-201ENST00000554110 156 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 MIR3923-201ENST00000579521 83 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 MIR7112-201ENST00000616126 65 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 MIR6733-201ENST00000635723 61 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 ZNF72P-201ENST00000425869 1908 ntBASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
PCDHA13Q9Y5I0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 OR56A5-201ENST00000340110 738 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 Y_RNA.27-201ENST00000362540 103 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 RNU6-655P-201ENST00000362858 107 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 Y_RNA.153-201ENST00000363615 91 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 RNU4-50P-201ENST00000364361 141 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 RNA5SP267-201ENST00000364893 126 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 RNA5SP213-201ENST00000391031 106 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 Z98742.2-201ENST00000431564 187 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 MICF-203ENST00000432679 129 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 RNU7-87P-201ENST00000459343 62 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 U8.20-201ENST00000459445 131 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 AC007215.1-201ENST00000464893 276 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 AL121594.1-201ENST00000475906 575 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 MRPS36P2-201ENST00000512569 299 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 SCARNA17.1-201ENST00000516211 143 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 SCARNA17.2-201ENST00000516334 143 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 RNA5SP54-201ENST00000516951 92 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 RN7SKP272-201ENST00000516988 232 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 Y_RNA.715-201ENST00000517082 110 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 AP002770.2-201ENST00000543613 532 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 AC027288.2-201ENST00000553028 243 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 MIR4765-201ENST00000585007 77 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 AC008739.2-201ENST00000597006 317 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 RPS29P30-201ENST00000600975 111 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 AL034555.1-201ENST00000604816 211 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 SCARNA17.4-201ENST00000614296 143 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 AC091953.5-201ENST00000622919 233 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHA13Q9Y5I0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHA13Q9Y5I0 AC000403.1-201ENST00000613696 3585 ntBASIC3.09□□□□□ -1.91
PCDHA13Q9Y5I0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHA13Q9Y5I0 Z75746.1-201ENST00000440243 2080 ntBASIC3.09□□□□□ -1.91
PCDHA13Q9Y5I0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PCDHA13Q9Y5I0 Y_RNA.152-201ENST00000363578 100 ntBASIC3.09□□□□□ -1.91
PCDHA13Q9Y5I0 Y_RNA.319-201ENST00000365138 92 ntBASIC3.09□□□□□ -1.91
PCDHA13Q9Y5I0 SNORA9-201ENST00000384215 133 ntBASIC3.09□□□□□ -1.91
PCDHA13Q9Y5I0 RNY3P4-201ENST00000384428 101 ntBASIC3.09□□□□□ -1.91
PCDHA13Q9Y5I0 MIR512-1-201ENST00000384913 84 ntBASIC3.09□□□□□ -1.91
PCDHA13Q9Y5I0 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHA13Q9Y5I0 EIF1P2-201ENST00000428233 350 ntBASIC3.09□□□□□ -1.91
PCDHA13Q9Y5I0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHA13Q9Y5I0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.09□□□□□ -1.91
PCDHA13Q9Y5I0 AC073910.1-201ENST00000445047 438 ntBASIC3.09□□□□□ -1.91
PCDHA13Q9Y5I0 RPS3P1-201ENST00000456781 192 ntBASIC3.09□□□□□ -1.91
PCDHA13Q9Y5I0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHA13Q9Y5I0 SEM1P1-201ENST00000506694 209 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms