Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 RNA5SP309-201ENST00000516670 106 ntBASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 RNA5SP73-201ENST00000516744 108 ntBASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 LARP7P3-201ENST00000579888 337 ntBASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 MIR4715-201ENST00000584117 79 ntBASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 AC099778.2-201ENST00000610904 211 ntBASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 MIR7702-201ENST00000621931 59 ntBASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA11Q9Y5H2 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA11Q9Y5H2 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
PCDHGA11Q9Y5H2 SNORA51.4-201ENST00000364993 124 ntBASIC4.11□□□□□ -1.75
PCDHGA11Q9Y5H2 Y_RNA.420-201ENST00000384043 110 ntBASIC4.11□□□□□ -1.75
PCDHGA11Q9Y5H2 SNORA20-201ENST00000384662 132 ntBASIC4.11□□□□□ -1.75
PCDHGA11Q9Y5H2 RNA5SP306-201ENST00000411087 107 ntBASIC4.11□□□□□ -1.75
PCDHGA11Q9Y5H2 AL157831.1-201ENST00000426134 473 ntBASIC4.11□□□□□ -1.75
PCDHGA11Q9Y5H2 SNORA71B-202ENST00000439232 272 ntBASIC4.11□□□□□ -1.75
PCDHGA11Q9Y5H2 RPL23AP52-201ENST00000439311 478 ntBASIC4.11□□□□□ -1.75
PCDHGA11Q9Y5H2 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHGA11Q9Y5H2 PPIAP15-201ENST00000479662 484 ntBASIC4.11□□□□□ -1.75
PCDHGA11Q9Y5H2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.11□□□□□ -1.75
PCDHGA11Q9Y5H2 MIR4443-201ENST00000585052 53 ntBASIC4.11□□□□□ -1.75
PCDHGA11Q9Y5H2 MIR6844-201ENST00000637122 62 ntBASIC4.11□□□□□ -1.75
PCDHGA11Q9Y5H2 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHGA11Q9Y5H2 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PCDHGA11Q9Y5H2 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PCDHGA11Q9Y5H2 AL159152.1-201ENST00000635019 2587 ntBASIC4.1□□□□□ -1.75
PCDHGA11Q9Y5H2 ZNF962P-201ENST00000443465 3140 ntBASIC4.1□□□□□ -1.75
PCDHGA11Q9Y5H2 RNU6-407P-201ENST00000365280 104 ntBASIC4.1□□□□□ -1.75
PCDHGA11Q9Y5H2 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHGA11Q9Y5H2 RNY3P5-201ENST00000384127 102 ntBASIC4.1□□□□□ -1.75
PCDHGA11Q9Y5H2 Y_RNA.521-201ENST00000384560 114 ntBASIC4.1□□□□□ -1.75
PCDHGA11Q9Y5H2 Y_RNA.542-201ENST00000384641 111 ntBASIC4.1□□□□□ -1.75
PCDHGA11Q9Y5H2 MIR300-201ENST00000401138 83 ntBASIC4.1□□□□□ -1.75
PCDHGA11Q9Y5H2 snoU13.1-201ENST00000459157 104 ntBASIC4.1□□□□□ -1.75
PCDHGA11Q9Y5H2 RN7SL585P-201ENST00000470538 280 ntBASIC4.1□□□□□ -1.75
PCDHGA11Q9Y5H2 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.1□□□□□ -1.75
PCDHGA11Q9Y5H2 AL360157.1-201ENST00000565962 87 ntBASIC4.1□□□□□ -1.75
PCDHGA11Q9Y5H2 RN7SL722P-201ENST00000617780 284 ntBASIC4.1□□□□□ -1.75
PCDHGA11Q9Y5H2 RN7SL565P-201ENST00000618246 284 ntBASIC4.1□□□□□ -1.75
PCDHGA11Q9Y5H2 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.1□□□□□ -1.75
PCDHGA11Q9Y5H2 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHGA11Q9Y5H2 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHGA11Q9Y5H2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PCDHGA11Q9Y5H2 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PCDHGA11Q9Y5H2 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PCDHGA11Q9Y5H2 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHGA11Q9Y5H2 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 RNU1-105P-201ENST00000363470 161 ntBASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 RNA5SP447-201ENST00000363749 119 ntBASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 Y_RNA.218-201ENST00000364218 104 ntBASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 MIR518C-201ENST00000384822 101 ntBASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 MT-TT-201ENST00000387460 66 ntBASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 MIR873-201ENST00000401120 77 ntBASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 RPS29P17-201ENST00000430795 166 ntBASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 HSPE1P13-201ENST00000451143 297 ntBASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 AC114982.1-201ENST00000469402 321 ntBASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 AC025554.1-201ENST00000505641 188 ntBASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 MIR4644-201ENST00000579929 84 ntBASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 AC110741.2-201ENST00000605278 268 ntBASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 uc_338.32-201ENST00000615087 172 ntBASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 MIR548AY-201ENST00000617669 107 ntBASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 AL445567.2-201ENST00000618935 498 ntBASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 AC068647.2-201ENST00000637380 353 ntBASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
PCDHGA11Q9Y5H2 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PCDHGA11Q9Y5H2 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PCDHGA11Q9Y5H2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PCDHGA11Q9Y5H2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PCDHGA11Q9Y5H2 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PCDHGA11Q9Y5H2 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PCDHGA11Q9Y5H2 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGA11Q9Y5H2 RNU1-14P-201ENST00000362759 152 ntBASIC4.08□□□□□ -1.76
PCDHGA11Q9Y5H2 RNU6-271P-201ENST00000363858 105 ntBASIC4.08□□□□□ -1.76
PCDHGA11Q9Y5H2 SNORD32B-201ENST00000364460 84 ntBASIC4.08□□□□□ -1.76
PCDHGA11Q9Y5H2 U8.7-201ENST00000364940 136 ntBASIC4.08□□□□□ -1.76
PCDHGA11Q9Y5H2 RNU6-215P-201ENST00000365169 102 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms