Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 AC012306.1-201ENST00000423267 114 ntBASIC3.24□□□□□ -1.89
PCDHGA2Q9Y5H1 AC096644.2-201ENST00000429278 159 ntBASIC3.24□□□□□ -1.89
PCDHGA2Q9Y5H1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHGA2Q9Y5H1 RNU7-169P-201ENST00000459456 61 ntBASIC3.24□□□□□ -1.89
PCDHGA2Q9Y5H1 SNORA31.6-201ENST00000516241 130 ntBASIC3.24□□□□□ -1.89
PCDHGA2Q9Y5H1 RNU6-1046P-201ENST00000516538 107 ntBASIC3.24□□□□□ -1.89
PCDHGA2Q9Y5H1 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.24□□□□□ -1.89
PCDHGA2Q9Y5H1 MIR2355-201ENST00000517199 87 ntBASIC3.24□□□□□ -1.89
PCDHGA2Q9Y5H1 Z98751.3-201ENST00000604447 521 ntBASIC3.24□□□□□ -1.89
PCDHGA2Q9Y5H1 AL138963.2-201ENST00000605137 226 ntBASIC3.24□□□□□ -1.89
PCDHGA2Q9Y5H1 AL132822.1-201ENST00000617063 513 ntBASIC3.24□□□□□ -1.89
PCDHGA2Q9Y5H1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHGA2Q9Y5H1 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.24□□□□□ -1.89
PCDHGA2Q9Y5H1 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGA2Q9Y5H1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 AL136360.1-201ENST00000503377 1900 ntBASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 Y_RNA.133-201ENST00000363428 110 ntBASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 U3.13-201ENST00000364804 214 ntBASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 Y_RNA.389-201ENST00000383924 113 ntBASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 Y_RNA.526-201ENST00000384572 110 ntBASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 MIR153-2-201ENST00000385225 87 ntBASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 CBX3P9-201ENST00000402326 552 ntBASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 MTCO3P19-201ENST00000415864 321 ntBASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 MTND3P2-201ENST00000438452 342 ntBASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 HMGB1P35-201ENST00000503360 598 ntBASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 ANXA2P1-201ENST00000505539 926 ntBASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 AC091826.1-201ENST00000514065 313 ntBASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 SCARNA17.1-201ENST00000516211 143 ntBASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 SCARNA17.2-201ENST00000516334 143 ntBASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 AL117187.1-201ENST00000555482 181 ntBASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 MIR3923-201ENST00000579521 83 ntBASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 AC113195.1-201ENST00000579952 141 ntBASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 SCARNA17.4-201ENST00000614296 143 ntBASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 AL078596.1-201ENST00000624856 447 ntBASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 SNORD98-201ENST00000636377 67 ntBASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 AC026241.1-201ENST00000517873 2142 ntBASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHGA2Q9Y5H1 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 SNORA71.1-201ENST00000364523 117 ntBASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 Y_RNA.380-201ENST00000365663 111 ntBASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 RNU6-1105P-201ENST00000384774 107 ntBASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 MIR32-201ENST00000384965 70 ntBASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 RNA5SP293-201ENST00000410527 113 ntBASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 RPS26P42-201ENST00000413485 326 ntBASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 AC114482.1-201ENST00000418010 247 ntBASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 AC090525.1-201ENST00000479116 478 ntBASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 RNU5F-2P-201ENST00000516066 82 ntBASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 RNU2-53P-201ENST00000516257 147 ntBASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 CYP4A27P-201ENST00000567218 190 ntBASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 AC010620.2-201ENST00000600135 313 ntBASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 MIR7515-201ENST00000637837 67 ntBASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 MIR622-201ENST00000638396 96 ntBASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PCDHGA2Q9Y5H1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
PCDHGA2Q9Y5H1 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
PCDHGA2Q9Y5H1 Y_RNA.106-201ENST00000363189 100 ntBASIC3.21□□□□□ -1.9
PCDHGA2Q9Y5H1 SNORD21-201ENST00000383953 95 ntBASIC3.21□□□□□ -1.9
PCDHGA2Q9Y5H1 SNORA36A-201ENST00000384221 132 ntBASIC3.21□□□□□ -1.9
PCDHGA2Q9Y5H1 AL356057.3-201ENST00000402607 340 ntBASIC3.21□□□□□ -1.9
PCDHGA2Q9Y5H1 MIR548F4-201ENST00000408515 105 ntBASIC3.21□□□□□ -1.9
PCDHGA2Q9Y5H1 U6atac.2-201ENST00000408644 118 ntBASIC3.21□□□□□ -1.9
PCDHGA2Q9Y5H1 MIR1261-201ENST00000408659 82 ntBASIC3.21□□□□□ -1.9
PCDHGA2Q9Y5H1 AL356968.1-201ENST00000416622 474 ntBASIC3.21□□□□□ -1.9
PCDHGA2Q9Y5H1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDHGA2Q9Y5H1 AL590556.1-201ENST00000423231 483 ntBASIC3.21□□□□□ -1.9
PCDHGA2Q9Y5H1 AIMP1P2-201ENST00000425294 312 ntBASIC3.21□□□□□ -1.9
PCDHGA2Q9Y5H1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHGA2Q9Y5H1 OR2AQ1P-201ENST00000451972 200 ntBASIC3.21□□□□□ -1.9
PCDHGA2Q9Y5H1 HMGN1P18-201ENST00000457642 277 ntBASIC3.21□□□□□ -1.9
PCDHGA2Q9Y5H1 TOMM22P6-201ENST00000465035 409 ntBASIC3.21□□□□□ -1.9
PCDHGA2Q9Y5H1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHGA2Q9Y5H1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.21□□□□□ -1.9
PCDHGA2Q9Y5H1 AC090617.3-201ENST00000573670 475 ntBASIC3.21□□□□□ -1.9
PCDHGA2Q9Y5H1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHGA2Q9Y5H1 AL670379.2-201ENST00000604983 252 ntBASIC3.21□□□□□ -1.9
PCDHGA2Q9Y5H1 AC008121.3-201ENST00000618726 433 ntBASIC3.21□□□□□ -1.9
PCDHGA2Q9Y5H1 IGHVIII-44-202ENST00000636235 289 ntBASIC3.21□□□□□ -1.9
PCDHGA2Q9Y5H1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
PCDHGA2Q9Y5H1 ZNF72P-201ENST00000425869 1908 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 189.7 ms