Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 SNORD115-8-201ENST00000363856 82 ntBASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 SNORD115-38-201ENST00000365037 82 ntBASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 Y_RNA.458-201ENST00000384240 102 ntBASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 RNU6-378P-201ENST00000384324 107 ntBASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 RNU6-159P-201ENST00000391080 106 ntBASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 RNU6-1328P-201ENST00000410938 106 ntBASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 AC096638.1-201ENST00000444678 216 ntBASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 FCF1P4-201ENST00000448326 183 ntBASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 RNU6-567P-201ENST00000516746 107 ntBASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 IGKV2-26-201ENST00000518305 343 ntBASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 RNA5SP361-201ENST00000362686 118 ntBASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 Y_RNA.152-201ENST00000363578 100 ntBASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 RNU6-806P-201ENST00000365147 105 ntBASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 MIR183-201ENST00000384958 110 ntBASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 MIR208B-201ENST00000401172 77 ntBASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 EIF4EP4-201ENST00000424916 578 ntBASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 DYNLT3P2-201ENST00000442517 295 ntBASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 RNU6-897P-201ENST00000517135 105 ntBASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 MIR3923-201ENST00000579521 83 ntBASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 MIR5695-201ENST00000579717 85 ntBASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 MIR4276-201ENST00000584832 70 ntBASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 AC005520.5-201ENST00000613926 164 ntBASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 Z83843.1-201ENST00000604070 3685 ntBASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
R3HCC1Q9Y3T6 AP003122.5-201ENST00000527668 3766 ntBASIC3.65□□□□□ -1.82
R3HCC1Q9Y3T6 RNU6-879P-201ENST00000364328 108 ntBASIC3.65□□□□□ -1.83
R3HCC1Q9Y3T6 RNU4-56P-201ENST00000364700 142 ntBASIC3.65□□□□□ -1.83
R3HCC1Q9Y3T6 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.65□□□□□ -1.83
R3HCC1Q9Y3T6 RNU6-1083P-201ENST00000384022 107 ntBASIC3.65□□□□□ -1.83
R3HCC1Q9Y3T6 RNU6-281P-201ENST00000384212 103 ntBASIC3.65□□□□□ -1.83
R3HCC1Q9Y3T6 MIR34B-201ENST00000385076 84 ntBASIC3.65□□□□□ -1.83
R3HCC1Q9Y3T6 RNU6-1093P-201ENST00000391194 107 ntBASIC3.65□□□□□ -1.83
R3HCC1Q9Y3T6 AL512633.1-201ENST00000399931 655 ntBASIC3.65□□□□□ -1.83
R3HCC1Q9Y3T6 RNA5SP201-201ENST00000410316 124 ntBASIC3.65□□□□□ -1.83
R3HCC1Q9Y3T6 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.65□□□□□ -1.83
R3HCC1Q9Y3T6 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.65□□□□□ -1.83
R3HCC1Q9Y3T6 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.65□□□□□ -1.83
R3HCC1Q9Y3T6 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.65□□□□□ -1.83
R3HCC1Q9Y3T6 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.65□□□□□ -1.83
R3HCC1Q9Y3T6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.65□□□□□ -1.83
R3HCC1Q9Y3T6 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.65□□□□□ -1.83
R3HCC1Q9Y3T6 AL162713.1-201ENST00000604480 262 ntBASIC3.65□□□□□ -1.83
R3HCC1Q9Y3T6 AL138963.2-201ENST00000605137 226 ntBASIC3.65□□□□□ -1.83
R3HCC1Q9Y3T6 AC005296.1-201ENST00000616145 209 ntBASIC3.65□□□□□ -1.83
R3HCC1Q9Y3T6 U6.105-201ENST00000637379 88 ntBASIC3.65□□□□□ -1.83
R3HCC1Q9Y3T6 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.65□□□□□ -1.83
R3HCC1Q9Y3T6 FAM35CP-201ENST00000554755 2470 ntBASIC3.65□□□□□ -1.83
R3HCC1Q9Y3T6 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 snoU2_19.1-201ENST00000362361 80 ntBASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 RNU6-137P-201ENST00000363680 108 ntBASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 Y_RNA.222-201ENST00000364264 102 ntBASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 MIR490-201ENST00000384865 128 ntBASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 RPS29P12-201ENST00000460178 152 ntBASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 AC067942.3-201ENST00000512025 362 ntBASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 RNU6-1012P-201ENST00000516606 109 ntBASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 SCARNA11.3-201ENST00000517276 130 ntBASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 AP002404.1-201ENST00000532005 451 ntBASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 HSPE1P20-201ENST00000538133 289 ntBASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 MIR3149-201ENST00000584629 83 ntBASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 AL121655.1-201ENST00000605811 308 ntBASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 MIR7975-201ENST00000619350 68 ntBASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 MIR6733-201ENST00000635723 61 ntBASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
R3HCC1Q9Y3T6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
R3HCC1Q9Y3T6 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.63□□□□□ -1.83
R3HCC1Q9Y3T6 AC108206.1-201ENST00000570186 4159 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms