Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.86□□□□□ -2.11
SMC3Q9UQE7 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.86□□□□□ -2.11
SMC3Q9UQE7 MIR3941-201ENST00000582572 103 ntBASIC1.86□□□□□ -2.11
SMC3Q9UQE7 VN1R80P-201ENST00000597126 338 ntBASIC1.86□□□□□ -2.11
SMC3Q9UQE7 CTHRC1P1-201ENST00000605383 469 ntBASIC1.86□□□□□ -2.11
SMC3Q9UQE7 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.86□□□□□ -2.11
SMC3Q9UQE7 MIR6845-201ENST00000613182 61 ntBASIC1.86□□□□□ -2.11
SMC3Q9UQE7 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
SMC3Q9UQE7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.86□□□□□ -2.11
SMC3Q9UQE7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
SMC3Q9UQE7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
SMC3Q9UQE7 Y_RNA.167-201ENST00000363735 109 ntBASIC1.85□□□□□ -2.11
SMC3Q9UQE7 RNU6-517P-201ENST00000384362 110 ntBASIC1.85□□□□□ -2.11
SMC3Q9UQE7 MIR504-201ENST00000385065 83 ntBASIC1.85□□□□□ -2.11
SMC3Q9UQE7 MIR1261-201ENST00000408659 82 ntBASIC1.85□□□□□ -2.11
SMC3Q9UQE7 Y_RNA.615-201ENST00000410769 117 ntBASIC1.85□□□□□ -2.11
SMC3Q9UQE7 AC009310.1-201ENST00000414414 451 ntBASIC1.85□□□□□ -2.11
SMC3Q9UQE7 AL358453.1-201ENST00000422522 250 ntBASIC1.85□□□□□ -2.11
SMC3Q9UQE7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.85□□□□□ -2.11
SMC3Q9UQE7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.85□□□□□ -2.11
SMC3Q9UQE7 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.85□□□□□ -2.11
SMC3Q9UQE7 MTND3P16-201ENST00000452205 344 ntBASIC1.85□□□□□ -2.11
SMC3Q9UQE7 TPTE2P5-203ENST00000458118 728 ntBASIC1.85□□□□□ -2.11
SMC3Q9UQE7 FAM206BP-201ENST00000510179 541 ntBASIC1.85□□□□□ -2.11
SMC3Q9UQE7 AC104576.1-201ENST00000524225 88 ntBASIC1.85□□□□□ -2.11
SMC3Q9UQE7 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.85□□□□□ -2.11
SMC3Q9UQE7 AL158827.2-201ENST00000602494 330 ntBASIC1.85□□□□□ -2.11
SMC3Q9UQE7 RNU6-85P-201ENST00000605989 107 ntBASIC1.85□□□□□ -2.11
SMC3Q9UQE7 AP001330.5-201ENST00000607176 411 ntBASIC1.85□□□□□ -2.11
SMC3Q9UQE7 AC017083.3-201ENST00000609955 700 ntBASIC1.85□□□□□ -2.11
SMC3Q9UQE7 uc_338.5-201ENST00000611839 155 ntBASIC1.85□□□□□ -2.11
SMC3Q9UQE7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SMC3Q9UQE7 AC063943.3-201ENST00000615562 356 ntBASIC1.85□□□□□ -2.11
SMC3Q9UQE7 AC005609.4-201ENST00000625071 447 ntBASIC1.85□□□□□ -2.11
SMC3Q9UQE7 AL691447.3-201ENST00000635020 330 ntBASIC1.85□□□□□ -2.11
SMC3Q9UQE7 AC006026.1-201ENST00000444025 1803 ntBASIC1.84□□□□□ -2.11
SMC3Q9UQE7 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SMC3Q9UQE7 RNU11-3P-201ENST00000391111 133 ntBASIC1.84□□□□□ -2.11
SMC3Q9UQE7 AL627390.1-201ENST00000396055 340 ntBASIC1.84□□□□□ -2.11
SMC3Q9UQE7 RNU6-648P-201ENST00000410190 107 ntBASIC1.84□□□□□ -2.11
SMC3Q9UQE7 RN7SKP51-201ENST00000410781 304 ntBASIC1.84□□□□□ -2.11
SMC3Q9UQE7 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.84□□□□□ -2.11
SMC3Q9UQE7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.84□□□□□ -2.11
SMC3Q9UQE7 AL590556.1-201ENST00000423231 483 ntBASIC1.84□□□□□ -2.11
SMC3Q9UQE7 RPS15AP10-201ENST00000432472 382 ntBASIC1.84□□□□□ -2.11
SMC3Q9UQE7 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.84□□□□□ -2.11
SMC3Q9UQE7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.84□□□□□ -2.11
SMC3Q9UQE7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.84□□□□□ -2.11
SMC3Q9UQE7 AC090115.3-201ENST00000553218 849 ntBASIC1.84□□□□□ -2.11
SMC3Q9UQE7 MTCO3P23-201ENST00000561363 289 ntBASIC1.84□□□□□ -2.11
SMC3Q9UQE7 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.84□□□□□ -2.11
SMC3Q9UQE7 AC010525.2-201ENST00000590920 195 ntBASIC1.84□□□□□ -2.11
SMC3Q9UQE7 AC092747.3-201ENST00000603769 301 ntBASIC1.84□□□□□ -2.11
SMC3Q9UQE7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SMC3Q9UQE7 U1.36-201ENST00000620684 176 ntBASIC1.84□□□□□ -2.11
SMC3Q9UQE7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.84□□□□□ -2.11
SMC3Q9UQE7 AC099654.12-201ENST00000639868 649 ntBASIC1.84□□□□□ -2.11
SMC3Q9UQE7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
SMC3Q9UQE7 RNU6-1085P-201ENST00000363576 107 ntBASIC1.83□□□□□ -2.12
SMC3Q9UQE7 Y_RNA.399-201ENST00000383955 105 ntBASIC1.83□□□□□ -2.12
SMC3Q9UQE7 RNU6-1042P-201ENST00000384204 107 ntBASIC1.83□□□□□ -2.12
SMC3Q9UQE7 RNU6-293P-201ENST00000411259 106 ntBASIC1.83□□□□□ -2.12
SMC3Q9UQE7 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.83□□□□□ -2.12
SMC3Q9UQE7 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.83□□□□□ -2.12
SMC3Q9UQE7 AC243964.1-201ENST00000441814 261 ntBASIC1.83□□□□□ -2.12
SMC3Q9UQE7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.83□□□□□ -2.12
SMC3Q9UQE7 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.83□□□□□ -2.12
SMC3Q9UQE7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.83□□□□□ -2.12
SMC3Q9UQE7 AC083798.1-201ENST00000472671 131 ntBASIC1.83□□□□□ -2.12
SMC3Q9UQE7 RNU6-718P-201ENST00000516166 105 ntBASIC1.83□□□□□ -2.12
SMC3Q9UQE7 RNU6-506P-201ENST00000516553 94 ntBASIC1.83□□□□□ -2.12
SMC3Q9UQE7 Y_RNA.693-201ENST00000516641 110 ntBASIC1.83□□□□□ -2.12
SMC3Q9UQE7 RNU6-965P-201ENST00000516721 96 ntBASIC1.83□□□□□ -2.12
SMC3Q9UQE7 AP005597.4-201ENST00000526762 229 ntBASIC1.83□□□□□ -2.12
SMC3Q9UQE7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SMC3Q9UQE7 AC104984.5-201ENST00000586878 94 ntBASIC1.83□□□□□ -2.12
SMC3Q9UQE7 BNIP3P16-201ENST00000589779 534 ntBASIC1.83□□□□□ -2.12
SMC3Q9UQE7 AC064836.2-201ENST00000609491 462 ntBASIC1.83□□□□□ -2.12
SMC3Q9UQE7 AC015540.1-201ENST00000615828 501 ntBASIC1.83□□□□□ -2.12
SMC3Q9UQE7 AC241585.2-209ENST00000638217 143 ntBASIC1.83□□□□□ -2.12
SMC3Q9UQE7 AL356292.1-201ENST00000283110 373 ntBASIC1.82□□□□□ -2.12
SMC3Q9UQE7 RNU1-58P-201ENST00000362413 163 ntBASIC1.82□□□□□ -2.12
SMC3Q9UQE7 SNORA36A-201ENST00000384221 132 ntBASIC1.82□□□□□ -2.12
SMC3Q9UQE7 SNORA12-201ENST00000391162 147 ntBASIC1.82□□□□□ -2.12
SMC3Q9UQE7 AL590002.1-201ENST00000406554 418 ntBASIC1.82□□□□□ -2.12
SMC3Q9UQE7 Y_RNA.597-201ENST00000410463 100 ntBASIC1.82□□□□□ -2.12
SMC3Q9UQE7 RNA5SP501-201ENST00000410990 112 ntBASIC1.82□□□□□ -2.12
SMC3Q9UQE7 TIMM9P3-201ENST00000428659 274 ntBASIC1.82□□□□□ -2.12
SMC3Q9UQE7 CBX3P6-201ENST00000430257 527 ntBASIC1.82□□□□□ -2.12
SMC3Q9UQE7 AC010095.1-201ENST00000443543 144 ntBASIC1.82□□□□□ -2.12
SMC3Q9UQE7 RNU1-98P-201ENST00000458992 160 ntBASIC1.82□□□□□ -2.12
SMC3Q9UQE7 AC023790.1-201ENST00000482174 347 ntBASIC1.82□□□□□ -2.12
SMC3Q9UQE7 AC091435.1-201ENST00000505442 584 ntBASIC1.82□□□□□ -2.12
SMC3Q9UQE7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.82□□□□□ -2.12
SMC3Q9UQE7 Y_RNA.655-201ENST00000515919 96 ntBASIC1.82□□□□□ -2.12
SMC3Q9UQE7 MIR449C-201ENST00000516047 92 ntBASIC1.82□□□□□ -2.12
SMC3Q9UQE7 RNU5F-2P-201ENST00000516066 82 ntBASIC1.82□□□□□ -2.12
SMC3Q9UQE7 RNU6-1281P-201ENST00000516223 105 ntBASIC1.82□□□□□ -2.12
SMC3Q9UQE7 AC069113.1-201ENST00000517763 267 ntBASIC1.82□□□□□ -2.12
SMC3Q9UQE7 MTND4P7-201ENST00000523876 130 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms