Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HDAC9Q9UKV0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.12□□□□□ -1.91
HDAC9Q9UKV0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HDAC9Q9UKV0 MIR147B-201ENST00000390185 80 ntBASIC3.12□□□□□ -1.91
HDAC9Q9UKV0 SNORA75.6-201ENST00000391318 127 ntBASIC3.12□□□□□ -1.91
HDAC9Q9UKV0 AL591034.2-201ENST00000402839 359 ntBASIC3.12□□□□□ -1.91
HDAC9Q9UKV0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HDAC9Q9UKV0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.12□□□□□ -1.91
HDAC9Q9UKV0 AC104389.3-201ENST00000445629 235 ntBASIC3.12□□□□□ -1.91
HDAC9Q9UKV0 AL031659.1-201ENST00000447075 539 ntBASIC3.12□□□□□ -1.91
HDAC9Q9UKV0 Y_RNA.639-201ENST00000458981 102 ntBASIC3.12□□□□□ -1.91
HDAC9Q9UKV0 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.12□□□□□ -1.91
HDAC9Q9UKV0 AC093303.1-201ENST00000514549 295 ntBASIC3.12□□□□□ -1.91
HDAC9Q9UKV0 RNA5SP320-201ENST00000516263 124 ntBASIC3.12□□□□□ -1.91
HDAC9Q9UKV0 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.12□□□□□ -1.91
HDAC9Q9UKV0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.12□□□□□ -1.91
HDAC9Q9UKV0 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.12□□□□□ -1.91
HDAC9Q9UKV0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.12□□□□□ -1.91
HDAC9Q9UKV0 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.12□□□□□ -1.91
HDAC9Q9UKV0 AC024581.2-201ENST00000619986 252 ntBASIC3.12□□□□□ -1.91
HDAC9Q9UKV0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.12□□□□□ -1.91
HDAC9Q9UKV0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.12□□□□□ -1.91
HDAC9Q9UKV0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 Y_RNA.2-201ENST00000362330 96 ntBASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 SNORD50.1-201ENST00000362987 71 ntBASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 Y_RNA.138-201ENST00000363462 102 ntBASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 SNORD32A-201ENST00000364805 84 ntBASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 Y_RNA.338-201ENST00000365320 114 ntBASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 RNU6-890P-201ENST00000384121 107 ntBASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 RNU6-331P-201ENST00000384724 107 ntBASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 RN7SKP223-201ENST00000410582 62 ntBASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 RNU6-1328P-201ENST00000410938 106 ntBASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 DPH3P2-201ENST00000422618 250 ntBASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 AC124916.1-201ENST00000444020 547 ntBASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 AC027575.1-201ENST00000481064 460 ntBASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 SCARNA16.2-201ENST00000516520 172 ntBASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 AC007536.1-201ENST00000533382 349 ntBASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 AC080078.3-201ENST00000605407 463 ntBASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 MTND4P27-201ENST00000450813 1354 ntBASIC3.11□□□□□ -1.91
HDAC9Q9UKV0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.1□□□□□ -1.91
HDAC9Q9UKV0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HDAC9Q9UKV0 Y_RNA.146-201ENST00000363549 102 ntBASIC3.1□□□□□ -1.91
HDAC9Q9UKV0 RNA5SP390-201ENST00000410191 113 ntBASIC3.1□□□□□ -1.91
HDAC9Q9UKV0 AC243428.1-201ENST00000421099 264 ntBASIC3.1□□□□□ -1.91
HDAC9Q9UKV0 RPL23AP95-201ENST00000426806 265 ntBASIC3.1□□□□□ -1.91
HDAC9Q9UKV0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.1□□□□□ -1.91
HDAC9Q9UKV0 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.1□□□□□ -1.91
HDAC9Q9UKV0 AC079354.2-201ENST00000453523 154 ntBASIC3.1□□□□□ -1.91
HDAC9Q9UKV0 FO393415.2-201ENST00000480085 343 ntBASIC3.1□□□□□ -1.91
HDAC9Q9UKV0 SRIP1-201ENST00000489235 288 ntBASIC3.1□□□□□ -1.91
HDAC9Q9UKV0 RNU6-1170P-201ENST00000515974 106 ntBASIC3.1□□□□□ -1.91
HDAC9Q9UKV0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.1□□□□□ -1.91
HDAC9Q9UKV0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.1□□□□□ -1.91
HDAC9Q9UKV0 AL080274.1-201ENST00000605565 220 ntBASIC3.1□□□□□ -1.91
HDAC9Q9UKV0 RNU6-91P-201ENST00000607774 107 ntBASIC3.1□□□□□ -1.91
HDAC9Q9UKV0 AC133104.2-201ENST00000615272 193 ntBASIC3.1□□□□□ -1.91
HDAC9Q9UKV0 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HDAC9Q9UKV0 MTND5P10-201ENST00000603719 1809 ntBASIC3.09□□□□□ -1.91
HDAC9Q9UKV0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HDAC9Q9UKV0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HDAC9Q9UKV0 Y_RNA.4-201ENST00000362333 112 ntBASIC3.09□□□□□ -1.91
HDAC9Q9UKV0 RNU6-784P-201ENST00000384330 106 ntBASIC3.09□□□□□ -1.91
HDAC9Q9UKV0 RNU6-1140P-201ENST00000410517 106 ntBASIC3.09□□□□□ -1.91
HDAC9Q9UKV0 RNU6-1245P-201ENST00000411130 106 ntBASIC3.09□□□□□ -1.91
HDAC9Q9UKV0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
HDAC9Q9UKV0 EIF4EP2-201ENST00000422816 654 ntBASIC3.09□□□□□ -1.91
HDAC9Q9UKV0 MTCO2P12-201ENST00000427426 682 ntBASIC3.09□□□□□ -1.91
HDAC9Q9UKV0 MTCYBP6-201ENST00000441810 138 ntBASIC3.09□□□□□ -1.91
HDAC9Q9UKV0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.09□□□□□ -1.91
HDAC9Q9UKV0 AL441985.1-201ENST00000457727 251 ntBASIC3.09□□□□□ -1.91
HDAC9Q9UKV0 AC091874.1-201ENST00000511402 339 ntBASIC3.09□□□□□ -1.91
HDAC9Q9UKV0 SNORA31.6-201ENST00000516241 130 ntBASIC3.09□□□□□ -1.91
HDAC9Q9UKV0 MIR5696-201ENST00000578474 85 ntBASIC3.09□□□□□ -1.91
HDAC9Q9UKV0 AC009318.2-201ENST00000610917 651 ntBASIC3.09□□□□□ -1.91
HDAC9Q9UKV0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
HDAC9Q9UKV0 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.08□□□□□ -1.92
HDAC9Q9UKV0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.08□□□□□ -1.92
HDAC9Q9UKV0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.08□□□□□ -1.92
HDAC9Q9UKV0 Z82195.2-201ENST00000612348 18351 ntBASIC3.08□□□□□ -1.92
HDAC9Q9UKV0 Y_RNA.395-201ENST00000383945 109 ntBASIC3.08□□□□□ -1.92
HDAC9Q9UKV0 RNU6-1040P-201ENST00000383974 107 ntBASIC3.08□□□□□ -1.92
HDAC9Q9UKV0 RNU6-1011P-201ENST00000384668 107 ntBASIC3.08□□□□□ -1.92
HDAC9Q9UKV0 SNORA41-201ENST00000384675 132 ntBASIC3.08□□□□□ -1.92
HDAC9Q9UKV0 MIR544A-201ENST00000384855 91 ntBASIC3.08□□□□□ -1.92
HDAC9Q9UKV0 AL133475.1-201ENST00000404414 305 ntBASIC3.08□□□□□ -1.92
HDAC9Q9UKV0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.08□□□□□ -1.92
HDAC9Q9UKV0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.08□□□□□ -1.92
HDAC9Q9UKV0 AC011816.1-201ENST00000441346 546 ntBASIC3.08□□□□□ -1.92
HDAC9Q9UKV0 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.08□□□□□ -1.92
HDAC9Q9UKV0 AP001324.2-201ENST00000461163 319 ntBASIC3.08□□□□□ -1.92
HDAC9Q9UKV0 AC103975.1-201ENST00000482506 483 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms