Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AC096644.4-201ENST00000563417 2912 ntBASIC3.31□□□□□ -1.88
USP25Q9UHP3 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.31□□□□□ -1.88
USP25Q9UHP3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
USP25Q9UHP3 RNU1-35P-201ENST00000362782 153 ntBASIC3.31□□□□□ -1.88
USP25Q9UHP3 RNU6-450P-201ENST00000364654 107 ntBASIC3.31□□□□□ -1.88
USP25Q9UHP3 RNU6-702P-201ENST00000364982 107 ntBASIC3.31□□□□□ -1.88
USP25Q9UHP3 RNU6-1109P-201ENST00000391187 107 ntBASIC3.31□□□□□ -1.88
USP25Q9UHP3 AL133475.1-201ENST00000404414 305 ntBASIC3.31□□□□□ -1.88
USP25Q9UHP3 RPL19P1-201ENST00000411635 428 ntBASIC3.31□□□□□ -1.88
USP25Q9UHP3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.31□□□□□ -1.88
USP25Q9UHP3 AC007098.1-201ENST00000420122 367 ntBASIC3.31□□□□□ -1.88
USP25Q9UHP3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
USP25Q9UHP3 MTND3P9-201ENST00000429526 346 ntBASIC3.31□□□□□ -1.88
USP25Q9UHP3 MICF-203ENST00000432679 129 ntBASIC3.31□□□□□ -1.88
USP25Q9UHP3 AC073910.1-201ENST00000445047 438 ntBASIC3.31□□□□□ -1.88
USP25Q9UHP3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
USP25Q9UHP3 MRPS35P2-201ENST00000508242 191 ntBASIC3.31□□□□□ -1.88
USP25Q9UHP3 RNA5SP112-201ENST00000515937 99 ntBASIC3.31□□□□□ -1.88
USP25Q9UHP3 Y_RNA.715-201ENST00000517082 110 ntBASIC3.31□□□□□ -1.88
USP25Q9UHP3 SNORA31.23-201ENST00000517219 133 ntBASIC3.31□□□□□ -1.88
USP25Q9UHP3 RPS15AP11-201ENST00000594193 385 ntBASIC3.31□□□□□ -1.88
USP25Q9UHP3 AC012493.2-201ENST00000595083 291 ntBASIC3.31□□□□□ -1.88
USP25Q9UHP3 AC124312.5-201ENST00000604451 268 ntBASIC3.31□□□□□ -1.88
USP25Q9UHP3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.31□□□□□ -1.88
USP25Q9UHP3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.31□□□□□ -1.88
USP25Q9UHP3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
USP25Q9UHP3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.31□□□□□ -1.88
USP25Q9UHP3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.3□□□□□ -1.88
USP25Q9UHP3 SNORD56.1-201ENST00000362913 68 ntBASIC3.3□□□□□ -1.88
USP25Q9UHP3 Y_RNA.111-201ENST00000363248 100 ntBASIC3.3□□□□□ -1.88
USP25Q9UHP3 Y_RNA.152-201ENST00000363578 100 ntBASIC3.3□□□□□ -1.88
USP25Q9UHP3 SNORA38.1-201ENST00000364172 131 ntBASIC3.3□□□□□ -1.88
USP25Q9UHP3 SNORD56.5-201ENST00000364281 72 ntBASIC3.3□□□□□ -1.88
USP25Q9UHP3 SNORA71.1-201ENST00000364523 117 ntBASIC3.3□□□□□ -1.88
USP25Q9UHP3 Y_RNA.276-201ENST00000364732 109 ntBASIC3.3□□□□□ -1.88
USP25Q9UHP3 SNORA9.2-201ENST00000365361 133 ntBASIC3.3□□□□□ -1.88
USP25Q9UHP3 SNORA63.7-201ENST00000365579 123 ntBASIC3.3□□□□□ -1.88
USP25Q9UHP3 Y_RNA.526-201ENST00000384572 110 ntBASIC3.3□□□□□ -1.88
USP25Q9UHP3 Y_RNA.556-201ENST00000384677 113 ntBASIC3.3□□□□□ -1.88
USP25Q9UHP3 MIR627-201ENST00000384979 97 ntBASIC3.3□□□□□ -1.88
USP25Q9UHP3 RNU6-700P-201ENST00000391043 107 ntBASIC3.3□□□□□ -1.88
USP25Q9UHP3 MTCYBP2-201ENST00000407745 171 ntBASIC3.3□□□□□ -1.88
USP25Q9UHP3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.3□□□□□ -1.88
USP25Q9UHP3 RNA5SP390-201ENST00000410191 113 ntBASIC3.3□□□□□ -1.88
USP25Q9UHP3 Y_RNA.618-201ENST00000410949 107 ntBASIC3.3□□□□□ -1.88
USP25Q9UHP3 AP000275.1-201ENST00000411943 390 ntBASIC3.3□□□□□ -1.88
USP25Q9UHP3 UBBP3-201ENST00000445497 241 ntBASIC3.3□□□□□ -1.88
USP25Q9UHP3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.3□□□□□ -1.88
USP25Q9UHP3 SNORA31.18-201ENST00000517043 134 ntBASIC3.3□□□□□ -1.88
USP25Q9UHP3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.3□□□□□ -1.88
USP25Q9UHP3 AC040926.1-201ENST00000530195 238 ntBASIC3.3□□□□□ -1.88
USP25Q9UHP3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.3□□□□□ -1.88
USP25Q9UHP3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.3□□□□□ -1.88
USP25Q9UHP3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.3□□□□□ -1.88
USP25Q9UHP3 YPEL5P2-201ENST00000605553 359 ntBASIC3.3□□□□□ -1.88
USP25Q9UHP3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.3□□□□□ -1.88
USP25Q9UHP3 AC007792.1-201ENST00000623023 402 ntBASIC3.3□□□□□ -1.88
USP25Q9UHP3 MIR7157-201ENST00000635801 60 ntBASIC3.3□□□□□ -1.88
USP25Q9UHP3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
USP25Q9UHP3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
USP25Q9UHP3 SNORD114-19-201ENST00000363072 75 ntBASIC3.29□□□□□ -1.88
USP25Q9UHP3 RNU6-486P-201ENST00000363116 107 ntBASIC3.29□□□□□ -1.88
USP25Q9UHP3 RNU6-851P-201ENST00000384565 107 ntBASIC3.29□□□□□ -1.88
USP25Q9UHP3 RNU6-1328P-201ENST00000410938 106 ntBASIC3.29□□□□□ -1.88
USP25Q9UHP3 AC124916.1-201ENST00000444020 547 ntBASIC3.29□□□□□ -1.88
USP25Q9UHP3 RN7SKP210-201ENST00000459176 261 ntBASIC3.29□□□□□ -1.88
USP25Q9UHP3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.29□□□□□ -1.88
USP25Q9UHP3 RPS27AP9-201ENST00000477681 438 ntBASIC3.29□□□□□ -1.88
USP25Q9UHP3 RPL23AP70-201ENST00000483361 460 ntBASIC3.29□□□□□ -1.88
USP25Q9UHP3 RN7SL504P-201ENST00000494496 287 ntBASIC3.29□□□□□ -1.88
USP25Q9UHP3 AC008885.1-201ENST00000514930 301 ntBASIC3.29□□□□□ -1.88
USP25Q9UHP3 AC009812.2-201ENST00000517657 457 ntBASIC3.29□□□□□ -1.88
USP25Q9UHP3 AC131281.1-201ENST00000522984 164 ntBASIC3.29□□□□□ -1.88
USP25Q9UHP3 AC079598.5-201ENST00000547460 117 ntBASIC3.29□□□□□ -1.88
USP25Q9UHP3 AC006600.1-201ENST00000572529 153 ntBASIC3.29□□□□□ -1.88
USP25Q9UHP3 RPL23AP88-201ENST00000605759 454 ntBASIC3.29□□□□□ -1.88
USP25Q9UHP3 MIR1244-1-201ENST00000612829 85 ntBASIC3.29□□□□□ -1.88
USP25Q9UHP3 MIR1244-3-201ENST00000635744 85 ntBASIC3.29□□□□□ -1.88
USP25Q9UHP3 MIR1244-2-201ENST00000636449 85 ntBASIC3.29□□□□□ -1.88
USP25Q9UHP3 MIR1244-4-202ENST00000636813 85 ntBASIC3.29□□□□□ -1.88
USP25Q9UHP3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.29□□□□□ -1.88
USP25Q9UHP3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.29□□□□□ -1.88
USP25Q9UHP3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
USP25Q9UHP3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
USP25Q9UHP3 RNU6-461P-201ENST00000364195 107 ntBASIC3.28□□□□□ -1.88
USP25Q9UHP3 RNU6-505P-201ENST00000384427 107 ntBASIC3.28□□□□□ -1.88
USP25Q9UHP3 AC138623.1-201ENST00000418060 216 ntBASIC3.28□□□□□ -1.88
USP25Q9UHP3 AC097463.2-201ENST00000421074 142 ntBASIC3.28□□□□□ -1.88
USP25Q9UHP3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.28□□□□□ -1.88
USP25Q9UHP3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.28□□□□□ -1.88
USP25Q9UHP3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.28□□□□□ -1.88
USP25Q9UHP3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.28□□□□□ -1.88
USP25Q9UHP3 AP001025.1-201ENST00000486139 332 ntBASIC3.28□□□□□ -1.88
USP25Q9UHP3 RNU6-826P-201ENST00000516827 104 ntBASIC3.28□□□□□ -1.88
USP25Q9UHP3 AL590705.4-201ENST00000532209 134 ntBASIC3.28□□□□□ -1.88
USP25Q9UHP3 AC105137.2-201ENST00000569073 466 ntBASIC3.28□□□□□ -1.88
USP25Q9UHP3 MIR3616-201ENST00000584070 92 ntBASIC3.28□□□□□ -1.88
USP25Q9UHP3 U2.1-201ENST00000618978 145 ntBASIC3.28□□□□□ -1.88
USP25Q9UHP3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
USP25Q9UHP3 RNY3P11-201ENST00000364153 102 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms