Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 RN7SKP58-201ENST00000411010 305 ntBASIC3.74□□□□□ -1.81
VTI1BQ9UEU0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.74□□□□□ -1.81
VTI1BQ9UEU0 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.74□□□□□ -1.81
VTI1BQ9UEU0 AC008749.1-201ENST00000597650 306 ntBASIC3.74□□□□□ -1.81
VTI1BQ9UEU0 AL442067.1-201ENST00000613261 223 ntBASIC3.74□□□□□ -1.81
VTI1BQ9UEU0 U7.8-201ENST00000619968 63 ntBASIC3.74□□□□□ -1.81
VTI1BQ9UEU0 AC006001.4-201ENST00000622243 395 ntBASIC3.74□□□□□ -1.81
VTI1BQ9UEU0 AC091932.3-201ENST00000624223 323 ntBASIC3.74□□□□□ -1.81
VTI1BQ9UEU0 MIR3674-201ENST00000636576 68 ntBASIC3.74□□□□□ -1.81
VTI1BQ9UEU0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.74□□□□□ -1.81
VTI1BQ9UEU0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VTI1BQ9UEU0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VTI1BQ9UEU0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
VTI1BQ9UEU0 Z98941.1-201ENST00000407764 100 ntBASIC3.73□□□□□ -1.81
VTI1BQ9UEU0 Y_RNA.597-201ENST00000410463 100 ntBASIC3.73□□□□□ -1.81
VTI1BQ9UEU0 RNA5SP504-201ENST00000410676 117 ntBASIC3.73□□□□□ -1.81
VTI1BQ9UEU0 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.73□□□□□ -1.81
VTI1BQ9UEU0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.73□□□□□ -1.81
VTI1BQ9UEU0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.73□□□□□ -1.81
VTI1BQ9UEU0 RPS12P18-201ENST00000442381 270 ntBASIC3.73□□□□□ -1.81
VTI1BQ9UEU0 RPL23AP3-201ENST00000453844 468 ntBASIC3.73□□□□□ -1.81
VTI1BQ9UEU0 AL139109.1-201ENST00000455491 297 ntBASIC3.73□□□□□ -1.81
VTI1BQ9UEU0 SCARNA3-201ENST00000517097 143 ntBASIC3.73□□□□□ -1.81
VTI1BQ9UEU0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.73□□□□□ -1.81
VTI1BQ9UEU0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.73□□□□□ -1.81
VTI1BQ9UEU0 AP002001.1-203ENST00000534002 267 ntBASIC3.73□□□□□ -1.81
VTI1BQ9UEU0 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.73□□□□□ -1.81
VTI1BQ9UEU0 MIR5047-201ENST00000579212 100 ntBASIC3.73□□□□□ -1.81
VTI1BQ9UEU0 AC010620.2-201ENST00000600135 313 ntBASIC3.73□□□□□ -1.81
VTI1BQ9UEU0 AL713866.2-201ENST00000603579 219 ntBASIC3.73□□□□□ -1.81
VTI1BQ9UEU0 AC004467.1-201ENST00000615678 330 ntBASIC3.73□□□□□ -1.81
VTI1BQ9UEU0 AC006133.1-201ENST00000617106 264 ntBASIC3.73□□□□□ -1.81
VTI1BQ9UEU0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
VTI1BQ9UEU0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VTI1BQ9UEU0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.73□□□□□ -1.81
VTI1BQ9UEU0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
VTI1BQ9UEU0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.72□□□□□ -1.81
VTI1BQ9UEU0 Y_RNA.101-201ENST00000363154 102 ntBASIC3.72□□□□□ -1.81
VTI1BQ9UEU0 Y_RNA.277-201ENST00000364754 102 ntBASIC3.72□□□□□ -1.81
VTI1BQ9UEU0 RNU6-338P-201ENST00000383888 105 ntBASIC3.72□□□□□ -1.81
VTI1BQ9UEU0 Y_RNA.446-201ENST00000384178 104 ntBASIC3.72□□□□□ -1.81
VTI1BQ9UEU0 MT-TR-201ENST00000387439 65 ntBASIC3.72□□□□□ -1.81
VTI1BQ9UEU0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VTI1BQ9UEU0 U6atac.2-201ENST00000408644 118 ntBASIC3.72□□□□□ -1.81
VTI1BQ9UEU0 RNU6-628P-201ENST00000410675 107 ntBASIC3.72□□□□□ -1.81
VTI1BQ9UEU0 AC002075.2-201ENST00000425207 252 ntBASIC3.72□□□□□ -1.81
VTI1BQ9UEU0 YME1L1P1-201ENST00000429435 297 ntBASIC3.72□□□□□ -1.81
VTI1BQ9UEU0 TBCAP1-201ENST00000436520 327 ntBASIC3.72□□□□□ -1.81
VTI1BQ9UEU0 POLR2KP2-201ENST00000438155 177 ntBASIC3.72□□□□□ -1.81
VTI1BQ9UEU0 RNU1-117P-201ENST00000517041 158 ntBASIC3.72□□□□□ -1.81
VTI1BQ9UEU0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.72□□□□□ -1.81
VTI1BQ9UEU0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.72□□□□□ -1.81
VTI1BQ9UEU0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VTI1BQ9UEU0 AC008873.1-201ENST00000625051 138 ntBASIC3.72□□□□□ -1.81
VTI1BQ9UEU0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
VTI1BQ9UEU0 AC058791.1-201ENST00000608412 3198 ntBASIC3.71□□□□□ -1.81
VTI1BQ9UEU0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.81
VTI1BQ9UEU0 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
VTI1BQ9UEU0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.71□□□□□ -1.82
VTI1BQ9UEU0 SNORA25.1-201ENST00000362326 128 ntBASIC3.71□□□□□ -1.82
VTI1BQ9UEU0 Y_RNA.44-201ENST00000362676 108 ntBASIC3.71□□□□□ -1.82
VTI1BQ9UEU0 Y_RNA.136-201ENST00000363444 102 ntBASIC3.71□□□□□ -1.82
VTI1BQ9UEU0 SNORD87-201ENST00000364849 89 ntBASIC3.71□□□□□ -1.82
VTI1BQ9UEU0 RNU6-1274P-201ENST00000384557 107 ntBASIC3.71□□□□□ -1.82
VTI1BQ9UEU0 RPL19P1-201ENST00000411635 428 ntBASIC3.71□□□□□ -1.82
VTI1BQ9UEU0 AC126124.2-201ENST00000413542 321 ntBASIC3.71□□□□□ -1.82
VTI1BQ9UEU0 RPS29P31-201ENST00000446147 164 ntBASIC3.71□□□□□ -1.82
VTI1BQ9UEU0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.71□□□□□ -1.82
VTI1BQ9UEU0 MIR4286-201ENST00000580651 93 ntBASIC3.71□□□□□ -1.82
VTI1BQ9UEU0 AC105245.1-201ENST00000581934 244 ntBASIC3.71□□□□□ -1.82
VTI1BQ9UEU0 MIR3199-1-201ENST00000582434 88 ntBASIC3.71□□□□□ -1.82
VTI1BQ9UEU0 AL109918.3-201ENST00000603072 338 ntBASIC3.71□□□□□ -1.82
VTI1BQ9UEU0 AC009779.6-201ENST00000603972 165 ntBASIC3.71□□□□□ -1.82
VTI1BQ9UEU0 RNVU1-4-201ENST00000612985 164 ntBASIC3.71□□□□□ -1.82
VTI1BQ9UEU0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.71□□□□□ -1.82
VTI1BQ9UEU0 MIR6500-201ENST00000622700 86 ntBASIC3.71□□□□□ -1.82
VTI1BQ9UEU0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
VTI1BQ9UEU0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
VTI1BQ9UEU0 AC110774.1-201ENST00000623567 2018 ntBASIC3.71□□□□□ -1.82
VTI1BQ9UEU0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
VTI1BQ9UEU0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 AC135776.4-201ENST00000624300 1904 ntBASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 Y_RNA.383-201ENST00000383855 97 ntBASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 RNU6-514P-201ENST00000384208 107 ntBASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 SNORA67.2-201ENST00000384300 149 ntBASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 RNA5SP475-201ENST00000410568 110 ntBASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 SNORA57.3-201ENST00000411095 141 ntBASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 AC017079.2-201ENST00000416102 485 ntBASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 AC083906.5-201ENST00000503722 328 ntBASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 AC026784.1-201ENST00000507986 352 ntBASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 RNU4-71P-201ENST00000516258 113 ntBASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 RNU6-966P-201ENST00000516479 104 ntBASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 RNA5SP164-201ENST00000516533 110 ntBASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 RNU6-107P-201ENST00000516643 102 ntBASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms