Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.07□□□□□ -1.92
DKK3Q9UBP4 AC007969.2-201ENST00000441891 191 ntBASIC3.07□□□□□ -1.92
DKK3Q9UBP4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.07□□□□□ -1.92
DKK3Q9UBP4 MTCO3P8-201ENST00000453691 755 ntBASIC3.07□□□□□ -1.92
DKK3Q9UBP4 MRPL42P6-201ENST00000486397 371 ntBASIC3.07□□□□□ -1.92
DKK3Q9UBP4 RPS29P20-201ENST00000489592 171 ntBASIC3.07□□□□□ -1.92
DKK3Q9UBP4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.07□□□□□ -1.92
DKK3Q9UBP4 RNU7-175P-201ENST00000515915 61 ntBASIC3.07□□□□□ -1.92
DKK3Q9UBP4 RNU6-237P-201ENST00000515985 71 ntBASIC3.07□□□□□ -1.92
DKK3Q9UBP4 SNORA31.21-201ENST00000517180 77 ntBASIC3.07□□□□□ -1.92
DKK3Q9UBP4 AC109329.1-201ENST00000518744 317 ntBASIC3.07□□□□□ -1.92
DKK3Q9UBP4 AC091144.1-201ENST00000519573 138 ntBASIC3.07□□□□□ -1.92
DKK3Q9UBP4 AC131281.1-201ENST00000522984 164 ntBASIC3.07□□□□□ -1.92
DKK3Q9UBP4 AC022080.3-201ENST00000544433 482 ntBASIC3.07□□□□□ -1.92
DKK3Q9UBP4 AC016256.1-201ENST00000547971 354 ntBASIC3.07□□□□□ -1.92
DKK3Q9UBP4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.07□□□□□ -1.92
DKK3Q9UBP4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.07□□□□□ -1.92
DKK3Q9UBP4 AC103810.1-201ENST00000579873 453 ntBASIC3.07□□□□□ -1.92
DKK3Q9UBP4 AC100812.1-201ENST00000607622 580 ntBASIC3.07□□□□□ -1.92
DKK3Q9UBP4 AC073308.1-201ENST00000623696 305 ntBASIC3.07□□□□□ -1.92
DKK3Q9UBP4 AC009541.1-201ENST00000438279 2662 ntBASIC3.07□□□□□ -1.92
DKK3Q9UBP4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.07□□□□□ -1.92
DKK3Q9UBP4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
DKK3Q9UBP4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
DKK3Q9UBP4 RNU6-874P-201ENST00000362390 105 ntBASIC3.06□□□□□ -1.92
DKK3Q9UBP4 RNU4-50P-201ENST00000364361 141 ntBASIC3.06□□□□□ -1.92
DKK3Q9UBP4 RNU4-9P-201ENST00000364951 139 ntBASIC3.06□□□□□ -1.92
DKK3Q9UBP4 RNU6-1280P-201ENST00000365211 107 ntBASIC3.06□□□□□ -1.92
DKK3Q9UBP4 Y_RNA.405-201ENST00000383979 100 ntBASIC3.06□□□□□ -1.92
DKK3Q9UBP4 Y_RNA.451-201ENST00000384200 100 ntBASIC3.06□□□□□ -1.92
DKK3Q9UBP4 Y_RNA.524-201ENST00000384564 100 ntBASIC3.06□□□□□ -1.92
DKK3Q9UBP4 Y_RNA.561-201ENST00000384694 100 ntBASIC3.06□□□□□ -1.92
DKK3Q9UBP4 MIR627-201ENST00000384979 97 ntBASIC3.06□□□□□ -1.92
DKK3Q9UBP4 SNORD67-201ENST00000390833 111 ntBASIC3.06□□□□□ -1.92
DKK3Q9UBP4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
DKK3Q9UBP4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
DKK3Q9UBP4 ZNF72P-201ENST00000425869 1908 ntBASIC3.06□□□□□ -1.92
DKK3Q9UBP4 AL714022.1-201ENST00000439897 151 ntBASIC3.06□□□□□ -1.92
DKK3Q9UBP4 OSTCP8-201ENST00000445117 448 ntBASIC3.06□□□□□ -1.92
DKK3Q9UBP4 AL031659.1-201ENST00000447075 539 ntBASIC3.06□□□□□ -1.92
DKK3Q9UBP4 FCF1P4-201ENST00000448326 183 ntBASIC3.06□□□□□ -1.92
DKK3Q9UBP4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.06□□□□□ -1.92
DKK3Q9UBP4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.06□□□□□ -1.92
DKK3Q9UBP4 RNU7-169P-201ENST00000459456 61 ntBASIC3.06□□□□□ -1.92
DKK3Q9UBP4 RPL23AP70-201ENST00000483361 460 ntBASIC3.06□□□□□ -1.92
DKK3Q9UBP4 MIR2355-201ENST00000517199 87 ntBASIC3.06□□□□□ -1.92
DKK3Q9UBP4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.06□□□□□ -1.92
DKK3Q9UBP4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.06□□□□□ -1.92
DKK3Q9UBP4 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.06□□□□□ -1.92
DKK3Q9UBP4 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.06□□□□□ -1.92
DKK3Q9UBP4 AC108206.1-201ENST00000570186 4159 ntBASIC3.06□□□□□ -1.92
DKK3Q9UBP4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
DKK3Q9UBP4 AC233981.2-201ENST00000611524 1614 ntBASIC3.05□□□□□ -1.92
DKK3Q9UBP4 AC073325.2-201ENST00000339545 159 ntBASIC3.05□□□□□ -1.92
DKK3Q9UBP4 SNORD32A-201ENST00000364805 84 ntBASIC3.05□□□□□ -1.92
DKK3Q9UBP4 RNU6-843P-201ENST00000384454 104 ntBASIC3.05□□□□□ -1.92
DKK3Q9UBP4 RPL21P1-201ENST00000399532 476 ntBASIC3.05□□□□□ -1.92
DKK3Q9UBP4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.05□□□□□ -1.92
DKK3Q9UBP4 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.05□□□□□ -1.92
DKK3Q9UBP4 AL358453.1-201ENST00000422522 250 ntBASIC3.05□□□□□ -1.92
DKK3Q9UBP4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.05□□□□□ -1.92
DKK3Q9UBP4 AC107083.1-201ENST00000439643 279 ntBASIC3.05□□□□□ -1.92
DKK3Q9UBP4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.05□□□□□ -1.92
DKK3Q9UBP4 OR2AQ1P-201ENST00000451972 200 ntBASIC3.05□□□□□ -1.92
DKK3Q9UBP4 RN7SKP272-201ENST00000516988 232 ntBASIC3.05□□□□□ -1.92
DKK3Q9UBP4 SNORA31.23-201ENST00000517219 133 ntBASIC3.05□□□□□ -1.92
DKK3Q9UBP4 AC006199.1-201ENST00000548728 219 ntBASIC3.05□□□□□ -1.92
DKK3Q9UBP4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.05□□□□□ -1.92
DKK3Q9UBP4 MYL12BP1-201ENST00000569826 507 ntBASIC3.05□□□□□ -1.92
DKK3Q9UBP4 AC009163.5-201ENST00000575421 637 ntBASIC3.05□□□□□ -1.92
DKK3Q9UBP4 MIR4435-1-201ENST00000582552 80 ntBASIC3.05□□□□□ -1.92
DKK3Q9UBP4 MTND4LP5-201ENST00000605152 292 ntBASIC3.05□□□□□ -1.92
DKK3Q9UBP4 AL159153.1-201ENST00000619688 317 ntBASIC3.05□□□□□ -1.92
DKK3Q9UBP4 AC097372.5-201ENST00000623665 376 ntBASIC3.05□□□□□ -1.92
DKK3Q9UBP4 SCARNA4-201ENST00000629045 128 ntBASIC3.05□□□□□ -1.92
DKK3Q9UBP4 AC000403.1-201ENST00000613696 3585 ntBASIC3.05□□□□□ -1.92
DKK3Q9UBP4 AC009487.2-201ENST00000420969 6821 ntBASIC3.05□□□□□ -1.92
DKK3Q9UBP4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.05□□□□□ -1.92
DKK3Q9UBP4 AC010680.1-201ENST00000590024 3590 ntBASIC3.04□□□□□ -1.92
DKK3Q9UBP4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
DKK3Q9UBP4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.04□□□□□ -1.92
DKK3Q9UBP4 RNU6-238P-201ENST00000363313 106 ntBASIC3.04□□□□□ -1.92
DKK3Q9UBP4 Y_RNA.210-201ENST00000364161 110 ntBASIC3.04□□□□□ -1.92
DKK3Q9UBP4 RNU6-487P-201ENST00000365430 104 ntBASIC3.04□□□□□ -1.92
DKK3Q9UBP4 RNU6-1286P-201ENST00000383871 107 ntBASIC3.04□□□□□ -1.92
DKK3Q9UBP4 MIR628-201ENST00000385229 95 ntBASIC3.04□□□□□ -1.92
DKK3Q9UBP4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.04□□□□□ -1.92
DKK3Q9UBP4 snoU13.30-201ENST00000458951 104 ntBASIC3.04□□□□□ -1.92
DKK3Q9UBP4 RN7SL75P-201ENST00000461926 281 ntBASIC3.04□□□□□ -1.92
DKK3Q9UBP4 MED28P2-201ENST00000475771 317 ntBASIC3.04□□□□□ -1.92
DKK3Q9UBP4 AC103975.1-201ENST00000482506 483 ntBASIC3.04□□□□□ -1.92
DKK3Q9UBP4 RPL23AP75-201ENST00000491601 451 ntBASIC3.04□□□□□ -1.92
DKK3Q9UBP4 RPS27P26-201ENST00000494583 239 ntBASIC3.04□□□□□ -1.92
DKK3Q9UBP4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.04□□□□□ -1.92
DKK3Q9UBP4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.04□□□□□ -1.92
DKK3Q9UBP4 RPPH1-2P-201ENST00000516688 293 ntBASIC3.04□□□□□ -1.92
DKK3Q9UBP4 CKS1BP7-201ENST00000522230 235 ntBASIC3.04□□□□□ -1.92
DKK3Q9UBP4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.04□□□□□ -1.92
DKK3Q9UBP4 MIR5194-201ENST00000582634 120 ntBASIC3.04□□□□□ -1.92
DKK3Q9UBP4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms