Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 RPL21P10-201ENST00000463521 490 ntBASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 AC010401.1-201ENST00000463867 348 ntBASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 RNU6-1338P-201ENST00000516328 91 ntBASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 RNA5SP54-201ENST00000516951 92 ntBASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 SCARNA24.2-201ENST00000516968 130 ntBASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 CYP4A27P-201ENST00000567218 190 ntBASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 AC010900.2-201ENST00000604508 210 ntBASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 AC141273.2-201ENST00000618989 130 ntBASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 MIR7975-201ENST00000619350 68 ntBASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
KCMF1Q9P0J7 AC110774.1-201ENST00000623567 2018 ntBASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 MIR335-201ENST00000362173 94 ntBASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 RNU6-1010P-201ENST00000362757 107 ntBASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 SNORD81.1-201ENST00000363064 77 ntBASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 RNU6-280P-201ENST00000364145 104 ntBASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 Y_RNA.416-201ENST00000384014 113 ntBASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 RNU6-1145P-201ENST00000384246 107 ntBASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 U3.26-201ENST00000391236 204 ntBASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 AC010095.1-201ENST00000443543 144 ntBASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 RN7SL442P-201ENST00000473804 320 ntBASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 RNU6-111P-201ENST00000517179 105 ntBASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 TGIF1P1-201ENST00000558095 802 ntBASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 AC012493.2-201ENST00000595083 291 ntBASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 AL162713.1-201ENST00000604480 262 ntBASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 AL034555.1-201ENST00000604816 211 ntBASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KCMF1Q9P0J7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 Y_RNA.333-201ENST00000365274 102 ntBASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 SNORD63-201ENST00000384262 68 ntBASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 Y_RNA.515-201ENST00000384535 112 ntBASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 RNVU1-14-201ENST00000384770 164 ntBASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 MIR767-201ENST00000390228 109 ntBASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 RNA5SP293-201ENST00000410527 113 ntBASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 AL365496.1-201ENST00000426885 215 ntBASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 AC112220.1-201ENST00000434628 355 ntBASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 AC006539.3-201ENST00000454258 129 ntBASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 AC112771.1-201ENST00000463581 102 ntBASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 AC021205.2-201ENST00000480069 347 ntBASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 RPL26P26-201ENST00000480251 434 ntBASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 AC093663.1-201ENST00000497190 394 ntBASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 FCF1P8-201ENST00000510322 597 ntBASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 RNU6-496P-201ENST00000516145 99 ntBASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 SNORA31.6-201ENST00000516241 130 ntBASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 SNORA25.14-201ENST00000516481 132 ntBASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 MIR2276-201ENST00000516886 89 ntBASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 RNU6-711P-201ENST00000517255 106 ntBASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 MIR3923-201ENST00000579521 83 ntBASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 AC007179.3-201ENST00000604976 235 ntBASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 MIR7153-201ENST00000637758 57 ntBASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.21□□□□□ -1.9
KCMF1Q9P0J7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
KCMF1Q9P0J7 MIR30E-201ENST00000362104 92 ntBASIC3.2□□□□□ -1.9
KCMF1Q9P0J7 Y_RNA.54-201ENST00000362766 105 ntBASIC3.2□□□□□ -1.9
KCMF1Q9P0J7 CBX3P9-201ENST00000402326 552 ntBASIC3.2□□□□□ -1.9
KCMF1Q9P0J7 RNU4-30P-201ENST00000410245 143 ntBASIC3.2□□□□□ -1.9
KCMF1Q9P0J7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.2□□□□□ -1.9
KCMF1Q9P0J7 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.2□□□□□ -1.9
KCMF1Q9P0J7 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.2□□□□□ -1.9
KCMF1Q9P0J7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.2□□□□□ -1.9
KCMF1Q9P0J7 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.2□□□□□ -1.9
KCMF1Q9P0J7 SNORA40.9-201ENST00000515895 93 ntBASIC3.2□□□□□ -1.9
KCMF1Q9P0J7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.2□□□□□ -1.9
KCMF1Q9P0J7 AC010999.1-201ENST00000611856 324 ntBASIC3.2□□□□□ -1.9
KCMF1Q9P0J7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.2□□□□□ -1.9
KCMF1Q9P0J7 AL357075.2-201ENST00000614906 189 ntBASIC3.2□□□□□ -1.9
KCMF1Q9P0J7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.2□□□□□ -1.9
KCMF1Q9P0J7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.2□□□□□ -1.9
KCMF1Q9P0J7 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
KCMF1Q9P0J7 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
KCMF1Q9P0J7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KCMF1Q9P0J7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms