Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
SMPD4Q9NXE4 RNU6-151P-201ENST00000364158 107 ntBASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 RNU4-84P-201ENST00000364200 139 ntBASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 AP002088.1-201ENST00000382740 395 ntBASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 RNU6-629P-201ENST00000384061 103 ntBASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 RNU6-166P-201ENST00000384371 107 ntBASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 SNORA40C-201ENST00000391285 128 ntBASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 UBA52P6-201ENST00000399822 382 ntBASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 RNU6-1001P-201ENST00000411265 100 ntBASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 AL159169.1-201ENST00000421119 127 ntBASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 POLR2KP2-201ENST00000438155 177 ntBASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 Z82210.1-201ENST00000440037 231 ntBASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 AC096638.1-201ENST00000444678 216 ntBASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 snoU109.2-201ENST00000459316 135 ntBASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 AC010401.1-201ENST00000463867 348 ntBASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 RPL23AP14-201ENST00000468281 468 ntBASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 AC139453.3-201ENST00000493276 369 ntBASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 RNU6-1333P-201ENST00000516162 93 ntBASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 RNU6-971P-201ENST00000516920 106 ntBASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 AC002545.1-201ENST00000592511 181 ntBASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 Y_RNA.778-201ENST00000620203 90 ntBASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 snoU18.1-201ENST00000629629 71 ntBASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SMPD4Q9NXE4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 RNU6-78P-201ENST00000362897 107 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 Y_RNA.127-201ENST00000363386 109 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 SNORD115-32-201ENST00000364079 82 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 RNU6-1325P-201ENST00000364905 105 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 RNU5E-7P-201ENST00000365290 117 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 RNU6-211P-201ENST00000384047 107 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 RNU6-968P-201ENST00000384076 107 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 MIR487A-201ENST00000385009 80 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 BTF3L4P2-201ENST00000392798 346 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 RNU2-2P-201ENST00000410396 191 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 AL353705.4-201ENST00000449661 238 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 HMGB3P8-201ENST00000449709 577 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 AC006539.3-201ENST00000454258 129 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 RPS29P2-201ENST00000479278 136 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 RPS4XP22-201ENST00000480755 780 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 RPL23AP49-201ENST00000492925 468 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 AC091874.1-201ENST00000511402 339 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 SNORA40.9-201ENST00000515895 93 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 RN7SKP49-201ENST00000516675 260 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 SNORA31.19-201ENST00000517079 126 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 AC112693.2-201ENST00000556538 232 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 UBL5P4-201ENST00000562584 236 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 AC055872.1-201ENST00000570978 278 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 AL133393.1-201ENST00000603277 287 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 RNU2-4P-201ENST00000606190 192 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 U2.15-201ENST00000611544 191 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 RMST_6.1-201ENST00000611980 203 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 U2.16-201ENST00000613119 191 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 U2.12-201ENST00000613778 191 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 U2.9-201ENST00000615427 191 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 U2.11-201ENST00000616345 191 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 U2.2-201ENST00000616535 191 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 U2.3-201ENST00000617785 191 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 U2.19-201ENST00000618602 191 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 RNU2-1-201ENST00000618664 191 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 U2.6-201ENST00000619225 191 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 U2.5-201ENST00000619465 191 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 U2.10-201ENST00000620268 191 ntBASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
SMPD4Q9NXE4 PWAR6-201ENST00000552334 4618 ntBASIC3.4□□□□□ -1.86
SMPD4Q9NXE4 AC010332.2-201ENST00000613083 1904 ntBASIC3.4□□□□□ -1.86
SMPD4Q9NXE4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SMPD4Q9NXE4 AC009541.1-201ENST00000438279 2662 ntBASIC3.4□□□□□ -1.86
SMPD4Q9NXE4 AL353743.1-202ENST00000431724 1695 ntBASIC3.4□□□□□ -1.86
SMPD4Q9NXE4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
SMPD4Q9NXE4 MIR30E-201ENST00000362104 92 ntBASIC3.4□□□□□ -1.87
SMPD4Q9NXE4 RNU6-600P-201ENST00000362524 99 ntBASIC3.4□□□□□ -1.87
SMPD4Q9NXE4 Y_RNA.71-201ENST00000362892 104 ntBASIC3.4□□□□□ -1.87
SMPD4Q9NXE4 Y_RNA.331-201ENST00000365267 102 ntBASIC3.4□□□□□ -1.87
SMPD4Q9NXE4 MIR10B-201ENST00000385011 110 ntBASIC3.4□□□□□ -1.87
SMPD4Q9NXE4 MIR514A1-201ENST00000385133 98 ntBASIC3.4□□□□□ -1.87
SMPD4Q9NXE4 Z85995.1-201ENST00000415547 335 ntBASIC3.4□□□□□ -1.87
SMPD4Q9NXE4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.4□□□□□ -1.87
SMPD4Q9NXE4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.4□□□□□ -1.87
SMPD4Q9NXE4 AC097462.2-201ENST00000504623 481 ntBASIC3.4□□□□□ -1.87
SMPD4Q9NXE4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.4□□□□□ -1.87
SMPD4Q9NXE4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.4□□□□□ -1.87
SMPD4Q9NXE4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.4□□□□□ -1.87
SMPD4Q9NXE4 AP004371.1-201ENST00000525240 214 ntBASIC3.4□□□□□ -1.87
SMPD4Q9NXE4 AL008718.3-201ENST00000610217 321 ntBASIC3.4□□□□□ -1.87
SMPD4Q9NXE4 AC006001.4-201ENST00000622243 395 ntBASIC3.4□□□□□ -1.87
SMPD4Q9NXE4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
SMPD4Q9NXE4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 182.6 ms