Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 RNU6-738P-201ENST00000384531 106 ntBASIC3.1□□□□□ -1.91
MKS1Q9NXB0 RN7SKP58-201ENST00000411010 305 ntBASIC3.1□□□□□ -1.91
MKS1Q9NXB0 EIF1P2-201ENST00000428233 350 ntBASIC3.1□□□□□ -1.91
MKS1Q9NXB0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.1□□□□□ -1.91
MKS1Q9NXB0 AP004217.1-201ENST00000480579 346 ntBASIC3.1□□□□□ -1.91
MKS1Q9NXB0 AC107032.1-201ENST00000485945 480 ntBASIC3.1□□□□□ -1.91
MKS1Q9NXB0 AC132942.1-201ENST00000486753 483 ntBASIC3.1□□□□□ -1.91
MKS1Q9NXB0 AC074250.1-201ENST00000511117 192 ntBASIC3.1□□□□□ -1.91
MKS1Q9NXB0 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.1□□□□□ -1.91
MKS1Q9NXB0 CBX3P7-201ENST00000532876 502 ntBASIC3.1□□□□□ -1.91
MKS1Q9NXB0 MIR3616-201ENST00000584070 92 ntBASIC3.1□□□□□ -1.91
MKS1Q9NXB0 AC016727.2-201ENST00000603988 621 ntBASIC3.1□□□□□ -1.91
MKS1Q9NXB0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.1□□□□□ -1.91
MKS1Q9NXB0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.1□□□□□ -1.91
MKS1Q9NXB0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
MKS1Q9NXB0 RNU6-1180P-201ENST00000364935 107 ntBASIC3.09□□□□□ -1.91
MKS1Q9NXB0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
MKS1Q9NXB0 MIR10B-201ENST00000385011 110 ntBASIC3.09□□□□□ -1.91
MKS1Q9NXB0 RNA5SP213-201ENST00000391031 106 ntBASIC3.09□□□□□ -1.91
MKS1Q9NXB0 AL357075.1-201ENST00000404107 726 ntBASIC3.09□□□□□ -1.91
MKS1Q9NXB0 RNA5SP274-201ENST00000410484 108 ntBASIC3.09□□□□□ -1.91
MKS1Q9NXB0 MTCO3P19-201ENST00000415864 321 ntBASIC3.09□□□□□ -1.91
MKS1Q9NXB0 WARS2P1-201ENST00000429678 537 ntBASIC3.09□□□□□ -1.91
MKS1Q9NXB0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.09□□□□□ -1.91
MKS1Q9NXB0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.09□□□□□ -1.91
MKS1Q9NXB0 AC090515.1-201ENST00000465295 476 ntBASIC3.09□□□□□ -1.91
MKS1Q9NXB0 RN7SL20P-201ENST00000488827 297 ntBASIC3.09□□□□□ -1.91
MKS1Q9NXB0 RNU6-327P-201ENST00000516270 127 ntBASIC3.09□□□□□ -1.91
MKS1Q9NXB0 RPPH1-2P-201ENST00000516688 293 ntBASIC3.09□□□□□ -1.91
MKS1Q9NXB0 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.09□□□□□ -1.91
MKS1Q9NXB0 UBL5P4-201ENST00000562584 236 ntBASIC3.09□□□□□ -1.91
MKS1Q9NXB0 AL356575.1-201ENST00000603008 283 ntBASIC3.09□□□□□ -1.91
MKS1Q9NXB0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.09□□□□□ -1.91
MKS1Q9NXB0 AL162373.1-201ENST00000620433 407 ntBASIC3.09□□□□□ -1.91
MKS1Q9NXB0 AC039056.2-201ENST00000622261 511 ntBASIC3.09□□□□□ -1.91
MKS1Q9NXB0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
MKS1Q9NXB0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
MKS1Q9NXB0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.09□□□□□ -1.92
MKS1Q9NXB0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
MKS1Q9NXB0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
MKS1Q9NXB0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
MKS1Q9NXB0 BX322639.1-202ENST00000423987 2213 ntBASIC3.08□□□□□ -1.92
MKS1Q9NXB0 AC073325.2-201ENST00000339545 159 ntBASIC3.08□□□□□ -1.92
MKS1Q9NXB0 SNORA62.3-201ENST00000365110 153 ntBASIC3.08□□□□□ -1.92
MKS1Q9NXB0 Y_RNA.424-201ENST00000384063 103 ntBASIC3.08□□□□□ -1.92
MKS1Q9NXB0 Y_RNA.527-201ENST00000384573 102 ntBASIC3.08□□□□□ -1.92
MKS1Q9NXB0 MIR627-201ENST00000384979 97 ntBASIC3.08□□□□□ -1.92
MKS1Q9NXB0 RNU6-985P-201ENST00000410182 104 ntBASIC3.08□□□□□ -1.92
MKS1Q9NXB0 MTND2P23-201ENST00000422990 651 ntBASIC3.08□□□□□ -1.92
MKS1Q9NXB0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.08□□□□□ -1.92
MKS1Q9NXB0 RN7SL633P-201ENST00000488974 297 ntBASIC3.08□□□□□ -1.92
MKS1Q9NXB0 AC093852.1-201ENST00000503587 266 ntBASIC3.08□□□□□ -1.92
MKS1Q9NXB0 Y_RNA.721-201ENST00000517207 102 ntBASIC3.08□□□□□ -1.92
MKS1Q9NXB0 RNU6-586P-201ENST00000517265 104 ntBASIC3.08□□□□□ -1.92
MKS1Q9NXB0 AC022868.1-201ENST00000517767 391 ntBASIC3.08□□□□□ -1.92
MKS1Q9NXB0 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.08□□□□□ -1.92
MKS1Q9NXB0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
MKS1Q9NXB0 AC034105.4-201ENST00000568304 277 ntBASIC3.08□□□□□ -1.92
MKS1Q9NXB0 MIR3117-201ENST00000584034 78 ntBASIC3.08□□□□□ -1.92
MKS1Q9NXB0 AL356280.1-201ENST00000603614 379 ntBASIC3.08□□□□□ -1.92
MKS1Q9NXB0 AC116312.1-201ENST00000606841 314 ntBASIC3.08□□□□□ -1.92
MKS1Q9NXB0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
MKS1Q9NXB0 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.08□□□□□ -1.92
MKS1Q9NXB0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.08□□□□□ -1.92
MKS1Q9NXB0 ZNF204P-201ENST00000416749 2397 ntBASIC3.08□□□□□ -1.92
MKS1Q9NXB0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
MKS1Q9NXB0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.07□□□□□ -1.92
MKS1Q9NXB0 Y_RNA.145-201ENST00000363527 102 ntBASIC3.07□□□□□ -1.92
MKS1Q9NXB0 SNORD14.1-201ENST00000365609 90 ntBASIC3.07□□□□□ -1.92
MKS1Q9NXB0 RNU6-1274P-201ENST00000384557 107 ntBASIC3.07□□□□□ -1.92
MKS1Q9NXB0 MIR549A-201ENST00000385268 96 ntBASIC3.07□□□□□ -1.92
MKS1Q9NXB0 RNU6-220P-201ENST00000390919 107 ntBASIC3.07□□□□□ -1.92
MKS1Q9NXB0 SNORA12-201ENST00000391162 147 ntBASIC3.07□□□□□ -1.92
MKS1Q9NXB0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.07□□□□□ -1.92
MKS1Q9NXB0 AC113618.1-201ENST00000416747 285 ntBASIC3.07□□□□□ -1.92
MKS1Q9NXB0 AL445305.1-201ENST00000432577 575 ntBASIC3.07□□□□□ -1.92
MKS1Q9NXB0 AC096638.1-201ENST00000444678 216 ntBASIC3.07□□□□□ -1.92
MKS1Q9NXB0 AC103975.1-201ENST00000482506 483 ntBASIC3.07□□□□□ -1.92
MKS1Q9NXB0 RNU6-1045P-201ENST00000516321 107 ntBASIC3.07□□□□□ -1.92
MKS1Q9NXB0 AP002770.2-201ENST00000543613 532 ntBASIC3.07□□□□□ -1.92
MKS1Q9NXB0 AL442163.3-201ENST00000554110 156 ntBASIC3.07□□□□□ -1.92
MKS1Q9NXB0 AC005296.1-201ENST00000616145 209 ntBASIC3.07□□□□□ -1.92
MKS1Q9NXB0 MIR5739-201ENST00000619803 80 ntBASIC3.07□□□□□ -1.92
MKS1Q9NXB0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.07□□□□□ -1.92
MKS1Q9NXB0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
MKS1Q9NXB0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
MKS1Q9NXB0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
MKS1Q9NXB0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
MKS1Q9NXB0 SNORD32B-201ENST00000364460 84 ntBASIC3.06□□□□□ -1.92
MKS1Q9NXB0 Y_RNA.389-201ENST00000383924 113 ntBASIC3.06□□□□□ -1.92
MKS1Q9NXB0 RNU6-281P-201ENST00000384212 103 ntBASIC3.06□□□□□ -1.92
MKS1Q9NXB0 MIR218-2-201ENST00000385006 110 ntBASIC3.06□□□□□ -1.92
MKS1Q9NXB0 RNU6-823P-201ENST00000391042 103 ntBASIC3.06□□□□□ -1.92
MKS1Q9NXB0 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.06□□□□□ -1.92
MKS1Q9NXB0 Y_RNA.597-201ENST00000410463 100 ntBASIC3.06□□□□□ -1.92
MKS1Q9NXB0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.06□□□□□ -1.92
MKS1Q9NXB0 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.06□□□□□ -1.92
MKS1Q9NXB0 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.06□□□□□ -1.92
MKS1Q9NXB0 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.06□□□□□ -1.92
MKS1Q9NXB0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms