Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 RNU5E-4P-201ENST00000364931 120 ntBASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 Y_RNA.473-201ENST00000384333 102 ntBASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 Y_RNA.529-201ENST00000384586 119 ntBASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 MT-TD-201ENST00000387419 68 ntBASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 RNA5SP494-201ENST00000410653 129 ntBASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 RNU2-41P-201ENST00000410991 178 ntBASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 RNU6-370P-201ENST00000411008 104 ntBASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 AL358453.1-201ENST00000422522 250 ntBASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 AF186996.7-201ENST00000492781 209 ntBASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 RNU6-559P-201ENST00000516151 98 ntBASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 MIR4446-201ENST00000578505 67 ntBASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 AC006023.1-201ENST00000603944 259 ntBASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.42□□□□□ -2.02
SLC6A13Q9NSD5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.41□□□□□ -2.02
SLC6A13Q9NSD5 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
SLC6A13Q9NSD5 ZNF299P-201ENST00000406845 1804 ntBASIC2.41□□□□□ -2.02
SLC6A13Q9NSD5 RNU1-23P-201ENST00000363361 144 ntBASIC2.41□□□□□ -2.02
SLC6A13Q9NSD5 Y_RNA.356-201ENST00000365475 113 ntBASIC2.41□□□□□ -2.02
SLC6A13Q9NSD5 Y_RNA.387-201ENST00000383918 102 ntBASIC2.41□□□□□ -2.02
SLC6A13Q9NSD5 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SLC6A13Q9NSD5 SNORA75.4-201ENST00000391278 119 ntBASIC2.41□□□□□ -2.02
SLC6A13Q9NSD5 Y_RNA.597-201ENST00000410463 100 ntBASIC2.41□□□□□ -2.02
SLC6A13Q9NSD5 Y_RNA.604-201ENST00000410574 102 ntBASIC2.41□□□□□ -2.02
SLC6A13Q9NSD5 RPS26P42-201ENST00000413485 326 ntBASIC2.41□□□□□ -2.02
SLC6A13Q9NSD5 AC243428.1-201ENST00000421099 264 ntBASIC2.41□□□□□ -2.02
SLC6A13Q9NSD5 USMG5P1-201ENST00000425964 177 ntBASIC2.41□□□□□ -2.02
SLC6A13Q9NSD5 CBX3P6-201ENST00000430257 527 ntBASIC2.41□□□□□ -2.02
SLC6A13Q9NSD5 AC087477.1-201ENST00000465747 340 ntBASIC2.41□□□□□ -2.02
SLC6A13Q9NSD5 RNU1-104P-201ENST00000517280 175 ntBASIC2.41□□□□□ -2.02
SLC6A13Q9NSD5 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.41□□□□□ -2.02
SLC6A13Q9NSD5 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.41□□□□□ -2.02
SLC6A13Q9NSD5 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.41□□□□□ -2.02
SLC6A13Q9NSD5 PCGEM1.1-201ENST00000613431 131 ntBASIC2.41□□□□□ -2.02
SLC6A13Q9NSD5 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.41□□□□□ -2.02
SLC6A13Q9NSD5 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.41□□□□□ -2.02
SLC6A13Q9NSD5 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SLC6A13Q9NSD5 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.4□□□□□ -2.02
SLC6A13Q9NSD5 Y_RNA.2-201ENST00000362330 96 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 RNU6-1188P-201ENST00000363795 107 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 SNORA38-201ENST00000363946 132 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 SNORA67.1-201ENST00000364749 141 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 RNU4-9P-201ENST00000364951 139 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 Y_RNA.384-201ENST00000383909 102 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 RNU6-1297P-201ENST00000384415 104 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 Y_RNA.533-201ENST00000384596 114 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 MIR9-1-201ENST00000385198 89 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 MIR561-201ENST00000385216 97 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 MIR208B-201ENST00000401172 77 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 Z82209.1-201ENST00000422141 2135 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 snoU13.6-201ENST00000458785 104 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 RPL7P42-201ENST00000481005 679 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 RPL23AP75-201ENST00000491601 451 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 MTND3P22-201ENST00000510932 243 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 RNA5SP367-201ENST00000516557 118 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 GTF3AP2-201ENST00000557014 266 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 AL355375.2-201ENST00000574825 175 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 MIR4658-201ENST00000584344 65 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 AL158827.2-201ENST00000602494 330 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 AC137590.2-201ENST00000619709 240 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 AL691447.3-201ENST00000635020 330 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 AL669831.3-213ENST00000636676 183 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 AC112487.2-201ENST00000637950 304 ntBASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.4□□□□□ -2.03
SLC6A13Q9NSD5 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
SLC6A13Q9NSD5 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SLC6A13Q9NSD5 MIR6073-201ENST00000352083 89 ntBASIC2.39□□□□□ -2.03
SLC6A13Q9NSD5 U3.9-201ENST00000363823 204 ntBASIC2.39□□□□□ -2.03
SLC6A13Q9NSD5 SNORD32B-201ENST00000364460 84 ntBASIC2.39□□□□□ -2.03
SLC6A13Q9NSD5 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.39□□□□□ -2.03
SLC6A13Q9NSD5 RNU6-378P-201ENST00000384324 107 ntBASIC2.39□□□□□ -2.03
SLC6A13Q9NSD5 Y_RNA.490-201ENST00000384413 102 ntBASIC2.39□□□□□ -2.03
SLC6A13Q9NSD5 AC105272.1-201ENST00000438604 198 ntBASIC2.39□□□□□ -2.03
SLC6A13Q9NSD5 SNRPEP8-201ENST00000442866 260 ntBASIC2.39□□□□□ -2.03
SLC6A13Q9NSD5 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.39□□□□□ -2.03
SLC6A13Q9NSD5 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.39□□□□□ -2.03
SLC6A13Q9NSD5 RNU6-307P-201ENST00000516743 106 ntBASIC2.39□□□□□ -2.03
SLC6A13Q9NSD5 CBX3P8-201ENST00000532412 525 ntBASIC2.39□□□□□ -2.03
SLC6A13Q9NSD5 APOOP3-201ENST00000536787 586 ntBASIC2.39□□□□□ -2.03
SLC6A13Q9NSD5 EIF4A1P12-201ENST00000551910 141 ntBASIC2.39□□□□□ -2.03
SLC6A13Q9NSD5 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms