Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.83□□□□□ -2.28
UBQLN4Q9NRR5 AC007395.1-201ENST00000451333 677 ntBASIC0.83□□□□□ -2.28
UBQLN4Q9NRR5 AC114982.1-201ENST00000469402 321 ntBASIC0.83□□□□□ -2.28
UBQLN4Q9NRR5 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
UBQLN4Q9NRR5 ARL2BPP4-201ENST00000506854 471 ntBASIC0.83□□□□□ -2.28
UBQLN4Q9NRR5 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.83□□□□□ -2.28
UBQLN4Q9NRR5 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
UBQLN4Q9NRR5 RNU6-1178P-201ENST00000516674 107 ntBASIC0.83□□□□□ -2.28
UBQLN4Q9NRR5 RNA5SP503-201ENST00000517047 117 ntBASIC0.83□□□□□ -2.28
UBQLN4Q9NRR5 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
UBQLN4Q9NRR5 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.83□□□□□ -2.28
UBQLN4Q9NRR5 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.83□□□□□ -2.28
UBQLN4Q9NRR5 BNIP3P16-201ENST00000589779 534 ntBASIC0.83□□□□□ -2.28
UBQLN4Q9NRR5 AC078795.3-201ENST00000602913 472 ntBASIC0.83□□□□□ -2.28
UBQLN4Q9NRR5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.83□□□□□ -2.28
UBQLN4Q9NRR5 AC040896.1-201ENST00000613819 479 ntBASIC0.83□□□□□ -2.28
UBQLN4Q9NRR5 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.83□□□□□ -2.28
UBQLN4Q9NRR5 AL391994.1-201ENST00000254724 282 ntBASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 RNU6-1287P-201ENST00000362914 107 ntBASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 SNORA63D-201ENST00000364359 132 ntBASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 RNU6-1060P-201ENST00000384664 107 ntBASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 MIR222-201ENST00000384992 110 ntBASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 RNA5SP201-201ENST00000410316 124 ntBASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 AL133217.1-201ENST00000450980 425 ntBASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 RNU7-34P-201ENST00000459394 64 ntBASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 AC091435.1-201ENST00000505442 584 ntBASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 AC005771.1-201ENST00000585581 349 ntBASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 MTCO2P2-201ENST00000591258 225 ntBASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 BX284668.6-201ENST00000606899 438 ntBASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 PCGEM1.1-201ENST00000613431 131 ntBASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 AC068647.2-201ENST00000637380 353 ntBASIC0.82□□□□□ -2.28
UBQLN4Q9NRR5 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 RNU6-552P-201ENST00000362869 119 ntBASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 SNORD115-7-201ENST00000365306 82 ntBASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 SNORA4.2-201ENST00000365313 147 ntBASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 Y_RNA.504-201ENST00000384481 104 ntBASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 MIR620-201ENST00000385232 95 ntBASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 RNU6-1176P-201ENST00000390955 107 ntBASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 AL356776.1-201ENST00000406574 447 ntBASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 MTCO2P23-201ENST00000425216 680 ntBASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 AC069257.2-201ENST00000441819 155 ntBASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 MTND1P18-201ENST00000448191 573 ntBASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 AL031274.1-201ENST00000450334 232 ntBASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 AC016925.1-201ENST00000458303 298 ntBASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 RPS23P5-201ENST00000495419 428 ntBASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 Y_RNA.672-201ENST00000516289 104 ntBASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 SCARNA24.1-201ENST00000516465 137 ntBASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 AC023050.3-201ENST00000541142 333 ntBASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 EIF4A1P12-201ENST00000551910 141 ntBASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 MIR4709-201ENST00000577272 72 ntBASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 NIFKP6-201ENST00000598115 845 ntBASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 AC008147.4-201ENST00000617570 1204 ntBASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 AC126177.8-201ENST00000618339 1015 ntBASIC0.81□□□□□ -2.28
UBQLN4Q9NRR5 U3.4-201ENST00000363352 213 ntBASIC0.8□□□□□ -2.28
UBQLN4Q9NRR5 RNU6-715P-201ENST00000365204 103 ntBASIC0.8□□□□□ -2.28
UBQLN4Q9NRR5 RNU6-418P-201ENST00000384035 107 ntBASIC0.8□□□□□ -2.28
UBQLN4Q9NRR5 SNORA25-201ENST00000384384 134 ntBASIC0.8□□□□□ -2.28
UBQLN4Q9NRR5 MIR208B-201ENST00000401172 77 ntBASIC0.8□□□□□ -2.28
UBQLN4Q9NRR5 MTCO1P21-201ENST00000416634 589 ntBASIC0.8□□□□□ -2.28
UBQLN4Q9NRR5 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.8□□□□□ -2.28
UBQLN4Q9NRR5 AC078809.1-201ENST00000427601 140 ntBASIC0.8□□□□□ -2.28
UBQLN4Q9NRR5 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.8□□□□□ -2.28
UBQLN4Q9NRR5 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.8□□□□□ -2.28
UBQLN4Q9NRR5 UBE2V1P12-201ENST00000503954 474 ntBASIC0.8□□□□□ -2.28
UBQLN4Q9NRR5 AC104136.1-201ENST00000512969 394 ntBASIC0.8□□□□□ -2.28
UBQLN4Q9NRR5 RNU6-113P-201ENST00000516653 101 ntBASIC0.8□□□□□ -2.28
UBQLN4Q9NRR5 AC109479.2-201ENST00000517842 174 ntBASIC0.8□□□□□ -2.28
UBQLN4Q9NRR5 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.8□□□□□ -2.28
UBQLN4Q9NRR5 AL133173.2-201ENST00000614270 90 ntBASIC0.8□□□□□ -2.28
UBQLN4Q9NRR5 AC009159.2-201ENST00000617603 606 ntBASIC0.8□□□□□ -2.28
UBQLN4Q9NRR5 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.8□□□□□ -2.28
UBQLN4Q9NRR5 AC009878.1-201ENST00000621819 340 ntBASIC0.8□□□□□ -2.28
UBQLN4Q9NRR5 AC010608.3-201ENST00000625048 527 ntBASIC0.8□□□□□ -2.28
UBQLN4Q9NRR5 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.8□□□□□ -2.28
UBQLN4Q9NRR5 MTND4P9-201ENST00000507819 1346 ntBASIC0.8□□□□□ -2.28
UBQLN4Q9NRR5 AC092268.1-201ENST00000342691 405 ntBASIC0.79□□□□□ -2.28
UBQLN4Q9NRR5 RNU6-545P-201ENST00000362681 104 ntBASIC0.79□□□□□ -2.28
UBQLN4Q9NRR5 SNORD114-27-201ENST00000363766 70 ntBASIC0.79□□□□□ -2.28
UBQLN4Q9NRR5 RNU6-968P-201ENST00000384076 107 ntBASIC0.79□□□□□ -2.28
UBQLN4Q9NRR5 MIR194-1-201ENST00000384892 85 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms