Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.49□□□□□ -2.01
PCDH9Q9HC56 MIR3117-201ENST00000584034 78 ntBASIC2.49□□□□□ -2.01
PCDH9Q9HC56 AL158827.2-201ENST00000602494 330 ntBASIC2.49□□□□□ -2.01
PCDH9Q9HC56 AL356055.1-201ENST00000602528 446 ntBASIC2.49□□□□□ -2.01
PCDH9Q9HC56 AC007792.1-201ENST00000623023 402 ntBASIC2.49□□□□□ -2.01
PCDH9Q9HC56 AL691447.3-201ENST00000635020 330 ntBASIC2.49□□□□□ -2.01
PCDH9Q9HC56 AC016717.2-201ENST00000609089 5141 ntBASIC2.48□□□□□ -2.01
PCDH9Q9HC56 RNU4-76P-201ENST00000364509 141 ntBASIC2.48□□□□□ -2.01
PCDH9Q9HC56 RNU6-487P-201ENST00000365430 104 ntBASIC2.48□□□□□ -2.01
PCDH9Q9HC56 RNU6-1011P-201ENST00000384668 107 ntBASIC2.48□□□□□ -2.01
PCDH9Q9HC56 RNU6-1072P-201ENST00000384703 107 ntBASIC2.48□□□□□ -2.01
PCDH9Q9HC56 RNU6-443P-201ENST00000384780 107 ntBASIC2.48□□□□□ -2.01
PCDH9Q9HC56 SNORA75.6-201ENST00000391318 127 ntBASIC2.48□□□□□ -2.01
PCDH9Q9HC56 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.48□□□□□ -2.01
PCDH9Q9HC56 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.48□□□□□ -2.01
PCDH9Q9HC56 RNU7-152P-201ENST00000458982 64 ntBASIC2.48□□□□□ -2.01
PCDH9Q9HC56 AC068781.1-201ENST00000488231 618 ntBASIC2.48□□□□□ -2.01
PCDH9Q9HC56 AC104564.1-201ENST00000493028 407 ntBASIC2.48□□□□□ -2.01
PCDH9Q9HC56 AC022447.4-201ENST00000504053 364 ntBASIC2.48□□□□□ -2.01
PCDH9Q9HC56 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.48□□□□□ -2.01
PCDH9Q9HC56 RNU6-470P-201ENST00000515954 104 ntBASIC2.48□□□□□ -2.01
PCDH9Q9HC56 RNU6-307P-201ENST00000516743 106 ntBASIC2.48□□□□□ -2.01
PCDH9Q9HC56 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.48□□□□□ -2.01
PCDH9Q9HC56 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.48□□□□□ -2.01
PCDH9Q9HC56 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.48□□□□□ -2.01
PCDH9Q9HC56 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.48□□□□□ -2.01
PCDH9Q9HC56 AC005899.2-201ENST00000584353 90 ntBASIC2.48□□□□□ -2.01
PCDH9Q9HC56 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.48□□□□□ -2.01
PCDH9Q9HC56 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.48□□□□□ -2.01
PCDH9Q9HC56 AL080274.1-201ENST00000605565 220 ntBASIC2.48□□□□□ -2.01
PCDH9Q9HC56 uc_338.14-201ENST00000613162 166 ntBASIC2.48□□□□□ -2.01
PCDH9Q9HC56 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.48□□□□□ -2.01
PCDH9Q9HC56 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PCDH9Q9HC56 AL109809.4-201ENST00000603520 2185 ntBASIC2.48□□□□□ -2.01
PCDH9Q9HC56 AC069528.2-201ENST00000624849 1991 ntBASIC2.48□□□□□ -2.01
PCDH9Q9HC56 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PCDH9Q9HC56 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.48□□□□□ -2.01
PCDH9Q9HC56 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.47□□□□□ -2.01
PCDH9Q9HC56 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
PCDH9Q9HC56 AC233981.2-201ENST00000611524 1614 ntBASIC2.47□□□□□ -2.01
PCDH9Q9HC56 Z75746.1-201ENST00000440243 2080 ntBASIC2.47□□□□□ -2.01
PCDH9Q9HC56 Y_RNA.111-201ENST00000363248 100 ntBASIC2.47□□□□□ -2.01
PCDH9Q9HC56 RNU6-1040P-201ENST00000383974 107 ntBASIC2.47□□□□□ -2.01
PCDH9Q9HC56 RNU6-968P-201ENST00000384076 107 ntBASIC2.47□□□□□ -2.01
PCDH9Q9HC56 RNU6-784P-201ENST00000384330 106 ntBASIC2.47□□□□□ -2.01
PCDH9Q9HC56 AL359511.1-201ENST00000402970 211 ntBASIC2.47□□□□□ -2.01
PCDH9Q9HC56 AL354751.2-201ENST00000415471 210 ntBASIC2.47□□□□□ -2.01
PCDH9Q9HC56 AC244670.1-201ENST00000436879 112 ntBASIC2.47□□□□□ -2.01
PCDH9Q9HC56 GPM6BP3-201ENST00000442797 145 ntBASIC2.47□□□□□ -2.01
PCDH9Q9HC56 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.47□□□□□ -2.01
PCDH9Q9HC56 Y_RNA.661-201ENST00000516003 99 ntBASIC2.47□□□□□ -2.01
PCDH9Q9HC56 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.47□□□□□ -2.01
PCDH9Q9HC56 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.47□□□□□ -2.01
PCDH9Q9HC56 AC027176.1-201ENST00000560204 514 ntBASIC2.47□□□□□ -2.01
PCDH9Q9HC56 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.47□□□□□ -2.01
PCDH9Q9HC56 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.47□□□□□ -2.01
PCDH9Q9HC56 MIR4672-201ENST00000583126 81 ntBASIC2.47□□□□□ -2.01
PCDH9Q9HC56 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.47□□□□□ -2.01
PCDH9Q9HC56 RNU6-91P-201ENST00000607774 107 ntBASIC2.47□□□□□ -2.01
PCDH9Q9HC56 AC005014.2-201ENST00000607795 599 ntBASIC2.47□□□□□ -2.01
PCDH9Q9HC56 AC009318.2-201ENST00000610917 651 ntBASIC2.47□□□□□ -2.01
PCDH9Q9HC56 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.47□□□□□ -2.01
PCDH9Q9HC56 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.47□□□□□ -2.01
PCDH9Q9HC56 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.47□□□□□ -2.01
PCDH9Q9HC56 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.47□□□□□ -2.01
PCDH9Q9HC56 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
PCDH9Q9HC56 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.47□□□□□ -2.01
PCDH9Q9HC56 AL359854.1-201ENST00000614203 1594 ntBASIC2.47□□□□□ -2.01
PCDH9Q9HC56 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.47□□□□□ -2.01
PCDH9Q9HC56 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
PCDH9Q9HC56 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PCDH9Q9HC56 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.46□□□□□ -2.02
PCDH9Q9HC56 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
PCDH9Q9HC56 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PCDH9Q9HC56 RNY1P16-201ENST00000363063 111 ntBASIC2.46□□□□□ -2.02
PCDH9Q9HC56 RNU6-1141P-201ENST00000364520 107 ntBASIC2.46□□□□□ -2.02
PCDH9Q9HC56 RNU1-51P-201ENST00000365345 176 ntBASIC2.46□□□□□ -2.02
PCDH9Q9HC56 SNORA36A-201ENST00000384221 132 ntBASIC2.46□□□□□ -2.02
PCDH9Q9HC56 MIR218-1-201ENST00000384999 110 ntBASIC2.46□□□□□ -2.02
PCDH9Q9HC56 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
PCDH9Q9HC56 RNU6-308P-201ENST00000390957 107 ntBASIC2.46□□□□□ -2.02
PCDH9Q9HC56 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.46□□□□□ -2.02
PCDH9Q9HC56 AC097463.2-201ENST00000421074 142 ntBASIC2.46□□□□□ -2.02
PCDH9Q9HC56 AC243428.1-201ENST00000421099 264 ntBASIC2.46□□□□□ -2.02
PCDH9Q9HC56 EIF4EP2-201ENST00000422816 654 ntBASIC2.46□□□□□ -2.02
PCDH9Q9HC56 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.46□□□□□ -2.02
PCDH9Q9HC56 AL353705.4-201ENST00000449661 238 ntBASIC2.46□□□□□ -2.02
PCDH9Q9HC56 AC079354.2-201ENST00000453523 154 ntBASIC2.46□□□□□ -2.02
PCDH9Q9HC56 AC090096.1-201ENST00000489168 390 ntBASIC2.46□□□□□ -2.02
PCDH9Q9HC56 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.46□□□□□ -2.02
PCDH9Q9HC56 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.46□□□□□ -2.02
PCDH9Q9HC56 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.46□□□□□ -2.02
PCDH9Q9HC56 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.46□□□□□ -2.02
PCDH9Q9HC56 MIR4658-201ENST00000584344 65 ntBASIC2.46□□□□□ -2.02
PCDH9Q9HC56 MIR1291-201ENST00000627649 87 ntBASIC2.46□□□□□ -2.02
PCDH9Q9HC56 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.46□□□□□ -2.02
PCDH9Q9HC56 AC002543.1-201ENST00000299783 1954 ntBASIC2.46□□□□□ -2.02
PCDH9Q9HC56 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PCDH9Q9HC56 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
PCDH9Q9HC56 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms