Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AC019070.1-201ENST00000415008 1024 ntBASIC0.37□□□□□ -2.35
LRTM1Q9HBL6 AC092809.3-201ENST00000415453 231 ntBASIC0.37□□□□□ -2.35
LRTM1Q9HBL6 USP9YP14-201ENST00000430663 563 ntBASIC0.37□□□□□ -2.35
LRTM1Q9HBL6 ART2BP-201ENST00000453501 499 ntBASIC0.37□□□□□ -2.35
LRTM1Q9HBL6 RNU7-34P-201ENST00000459394 64 ntBASIC0.37□□□□□ -2.35
LRTM1Q9HBL6 AC022447.4-201ENST00000504053 364 ntBASIC0.37□□□□□ -2.35
LRTM1Q9HBL6 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.37□□□□□ -2.35
LRTM1Q9HBL6 MTCO3P28-201ENST00000513351 515 ntBASIC0.37□□□□□ -2.35
LRTM1Q9HBL6 AC112206.3-201ENST00000514578 389 ntBASIC0.37□□□□□ -2.35
LRTM1Q9HBL6 RNU4-57P-201ENST00000515980 135 ntBASIC0.37□□□□□ -2.35
LRTM1Q9HBL6 RNA5SP216-201ENST00000516111 123 ntBASIC0.37□□□□□ -2.35
LRTM1Q9HBL6 OR8K2P-201ENST00000524645 927 ntBASIC0.37□□□□□ -2.35
LRTM1Q9HBL6 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.37□□□□□ -2.35
LRTM1Q9HBL6 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.37□□□□□ -2.35
LRTM1Q9HBL6 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.37□□□□□ -2.35
LRTM1Q9HBL6 VN1R82P-201ENST00000601481 356 ntBASIC0.37□□□□□ -2.35
LRTM1Q9HBL6 AC023932.2-201ENST00000603176 175 ntBASIC0.37□□□□□ -2.35
LRTM1Q9HBL6 AC068787.1-201ENST00000623908 691 ntBASIC0.37□□□□□ -2.35
LRTM1Q9HBL6 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
LRTM1Q9HBL6 Y_RNA.578-201ENST00000390903 88 ntBASIC0.36□□□□□ -2.35
LRTM1Q9HBL6 ELOCP17-201ENST00000414751 326 ntBASIC0.36□□□□□ -2.35
LRTM1Q9HBL6 UBE2D3P3-201ENST00000426992 425 ntBASIC0.36□□□□□ -2.35
LRTM1Q9HBL6 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.36□□□□□ -2.35
LRTM1Q9HBL6 AC027338.1-201ENST00000514840 825 ntBASIC0.36□□□□□ -2.35
LRTM1Q9HBL6 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.36□□□□□ -2.35
LRTM1Q9HBL6 AC018659.1-201ENST00000551083 169 ntBASIC0.36□□□□□ -2.35
LRTM1Q9HBL6 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.36□□□□□ -2.35
LRTM1Q9HBL6 AC068620.3-201ENST00000602749 560 ntBASIC0.36□□□□□ -2.35
LRTM1Q9HBL6 AC105148.1-201ENST00000604961 409 ntBASIC0.36□□□□□ -2.35
LRTM1Q9HBL6 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.36□□□□□ -2.35
LRTM1Q9HBL6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
LRTM1Q9HBL6 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
LRTM1Q9HBL6 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
LRTM1Q9HBL6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
LRTM1Q9HBL6 RNU6-1054P-201ENST00000411293 104 ntBASIC0.35□□□□□ -2.35
LRTM1Q9HBL6 RNA5SP111-201ENST00000411386 101 ntBASIC0.35□□□□□ -2.35
LRTM1Q9HBL6 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.35□□□□□ -2.35
LRTM1Q9HBL6 VPS26BP1-201ENST00000417155 755 ntBASIC0.35□□□□□ -2.35
LRTM1Q9HBL6 RSL24D1P8-201ENST00000434442 492 ntBASIC0.35□□□□□ -2.35
LRTM1Q9HBL6 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.35□□□□□ -2.35
LRTM1Q9HBL6 AC007969.2-201ENST00000441891 191 ntBASIC0.35□□□□□ -2.35
LRTM1Q9HBL6 MTND3P5-201ENST00000512798 333 ntBASIC0.35□□□□□ -2.35
LRTM1Q9HBL6 SNORD79.1-201ENST00000516069 84 ntBASIC0.35□□□□□ -2.35
LRTM1Q9HBL6 RNA5SP255-201ENST00000516370 107 ntBASIC0.35□□□□□ -2.35
LRTM1Q9HBL6 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.35□□□□□ -2.35
LRTM1Q9HBL6 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.35□□□□□ -2.35
LRTM1Q9HBL6 Z83818.1-201ENST00000603584 150 ntBASIC0.35□□□□□ -2.35
LRTM1Q9HBL6 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
LRTM1Q9HBL6 AP002802.2-201ENST00000605877 235 ntBASIC0.35□□□□□ -2.35
LRTM1Q9HBL6 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.35□□□□□ -2.35
LRTM1Q9HBL6 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.35□□□□□ -2.35
LRTM1Q9HBL6 SNORA63.3-201ENST00000362682 132 ntBASIC0.34□□□□□ -2.36
LRTM1Q9HBL6 RPS3AP37-201ENST00000419176 745 ntBASIC0.34□□□□□ -2.36
LRTM1Q9HBL6 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.34□□□□□ -2.36
LRTM1Q9HBL6 AC048334.1-201ENST00000477975 159 ntBASIC0.34□□□□□ -2.36
LRTM1Q9HBL6 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.34□□□□□ -2.36
LRTM1Q9HBL6 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
LRTM1Q9HBL6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.34□□□□□ -2.36
LRTM1Q9HBL6 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.34□□□□□ -2.36
LRTM1Q9HBL6 AL353765.1-201ENST00000605514 183 ntBASIC0.34□□□□□ -2.36
LRTM1Q9HBL6 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
LRTM1Q9HBL6 Y_RNA.167-201ENST00000363735 109 ntBASIC0.33□□□□□ -2.36
LRTM1Q9HBL6 SNORD31B-201ENST00000364977 69 ntBASIC0.33□□□□□ -2.36
LRTM1Q9HBL6 SNORA72.2-201ENST00000365028 127 ntBASIC0.33□□□□□ -2.36
LRTM1Q9HBL6 SNORA4.2-201ENST00000365313 147 ntBASIC0.33□□□□□ -2.36
LRTM1Q9HBL6 RNU6-946P-201ENST00000383878 107 ntBASIC0.33□□□□□ -2.36
LRTM1Q9HBL6 RNU6-142P-201ENST00000384019 107 ntBASIC0.33□□□□□ -2.36
LRTM1Q9HBL6 MIR544A-201ENST00000384855 91 ntBASIC0.33□□□□□ -2.36
LRTM1Q9HBL6 MIR329-2-201ENST00000385029 84 ntBASIC0.33□□□□□ -2.36
LRTM1Q9HBL6 SNORA12.2-201ENST00000391040 156 ntBASIC0.33□□□□□ -2.36
LRTM1Q9HBL6 RNU2-62P-201ENST00000410868 191 ntBASIC0.33□□□□□ -2.36
LRTM1Q9HBL6 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.33□□□□□ -2.36
LRTM1Q9HBL6 AC244023.1-201ENST00000426884 112 ntBASIC0.33□□□□□ -2.36
LRTM1Q9HBL6 MTCYBP39-201ENST00000437562 491 ntBASIC0.33□□□□□ -2.36
LRTM1Q9HBL6 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.33□□□□□ -2.36
LRTM1Q9HBL6 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.33□□□□□ -2.36
LRTM1Q9HBL6 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.33□□□□□ -2.36
LRTM1Q9HBL6 Y_RNA.689-201ENST00000516589 107 ntBASIC0.33□□□□□ -2.36
LRTM1Q9HBL6 AP001893.2-201ENST00000526949 202 ntBASIC0.33□□□□□ -2.36
LRTM1Q9HBL6 MIR3136-201ENST00000583498 78 ntBASIC0.33□□□□□ -2.36
LRTM1Q9HBL6 AC242498.1-201ENST00000604134 111 ntBASIC0.33□□□□□ -2.36
LRTM1Q9HBL6 AC012467.1-201ENST00000607740 256 ntBASIC0.33□□□□□ -2.36
LRTM1Q9HBL6 AC243994.1-201ENST00000618627 109 ntBASIC0.33□□□□□ -2.36
LRTM1Q9HBL6 RNU6-1285P-201ENST00000363480 105 ntBASIC0.32□□□□□ -2.36
LRTM1Q9HBL6 RNU4-67P-201ENST00000364569 141 ntBASIC0.32□□□□□ -2.36
LRTM1Q9HBL6 RNU6-621P-201ENST00000364752 109 ntBASIC0.32□□□□□ -2.36
LRTM1Q9HBL6 RNU6-534P-201ENST00000364877 106 ntBASIC0.32□□□□□ -2.36
LRTM1Q9HBL6 Y_RNA.311-201ENST00000365068 96 ntBASIC0.32□□□□□ -2.36
LRTM1Q9HBL6 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
LRTM1Q9HBL6 RNU6-45P-201ENST00000384471 107 ntBASIC0.32□□□□□ -2.36
LRTM1Q9HBL6 AL031577.2-201ENST00000404133 280 ntBASIC0.32□□□□□ -2.36
LRTM1Q9HBL6 AC245047.7-201ENST00000440265 293 ntBASIC0.32□□□□□ -2.36
LRTM1Q9HBL6 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.32□□□□□ -2.36
LRTM1Q9HBL6 AC016925.1-201ENST00000458303 298 ntBASIC0.32□□□□□ -2.36
LRTM1Q9HBL6 MTCO3P9-201ENST00000506989 781 ntBASIC0.32□□□□□ -2.36
LRTM1Q9HBL6 AC113347.3-201ENST00000509113 148 ntBASIC0.32□□□□□ -2.36
LRTM1Q9HBL6 RNU6-1041P-201ENST00000516254 102 ntBASIC0.32□□□□□ -2.36
LRTM1Q9HBL6 SUMO2P16-201ENST00000519475 264 ntBASIC0.32□□□□□ -2.36
LRTM1Q9HBL6 MTATP6P25-201ENST00000574491 261 ntBASIC0.32□□□□□ -2.36
LRTM1Q9HBL6 MIR548AC-201ENST00000585049 88 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms