Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
RPAP3Q9H6T3 RNU4-55P-201ENST00000410731 137 ntBASIC1.86□□□□□ -2.11
RPAP3Q9H6T3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.86□□□□□ -2.11
RPAP3Q9H6T3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.86□□□□□ -2.11
RPAP3Q9H6T3 AL590556.1-201ENST00000423231 483 ntBASIC1.86□□□□□ -2.11
RPAP3Q9H6T3 CBX3P6-201ENST00000430257 527 ntBASIC1.86□□□□□ -2.11
RPAP3Q9H6T3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.86□□□□□ -2.11
RPAP3Q9H6T3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.86□□□□□ -2.11
RPAP3Q9H6T3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.86□□□□□ -2.11
RPAP3Q9H6T3 AC069113.1-201ENST00000517763 267 ntBASIC1.86□□□□□ -2.11
RPAP3Q9H6T3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.86□□□□□ -2.11
RPAP3Q9H6T3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.86□□□□□ -2.11
RPAP3Q9H6T3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.86□□□□□ -2.11
RPAP3Q9H6T3 MIR3198-2-201ENST00000577868 80 ntBASIC1.86□□□□□ -2.11
RPAP3Q9H6T3 VN1R107P-201ENST00000601784 209 ntBASIC1.86□□□□□ -2.11
RPAP3Q9H6T3 AL034555.1-201ENST00000604816 211 ntBASIC1.86□□□□□ -2.11
RPAP3Q9H6T3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RPAP3Q9H6T3 HULC.1-201ENST00000612720 240 ntBASIC1.86□□□□□ -2.11
RPAP3Q9H6T3 uc_338.34-201ENST00000617467 174 ntBASIC1.86□□□□□ -2.11
RPAP3Q9H6T3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
RPAP3Q9H6T3 SNORD98-201ENST00000636377 67 ntBASIC1.86□□□□□ -2.11
RPAP3Q9H6T3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 RNU6-1141P-201ENST00000364520 107 ntBASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 Y_RNA.255-201ENST00000364581 97 ntBASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 RNU6-60P-201ENST00000364792 103 ntBASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 SNORD116-2-201ENST00000384274 95 ntBASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 SNORD116-6-201ENST00000384711 96 ntBASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 MIR597-201ENST00000384968 97 ntBASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 RNA5SP219-201ENST00000390940 113 ntBASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 RNU11-3P-201ENST00000391111 133 ntBASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 AL606923.1-201ENST00000406616 190 ntBASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 RN7SKP101-201ENST00000411376 320 ntBASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 USP9YP14-201ENST00000430663 563 ntBASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 VN1R108P-201ENST00000431580 830 ntBASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 AC145146.1-201ENST00000496370 254 ntBASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 AC022447.4-201ENST00000504053 364 ntBASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 AC091874.1-201ENST00000511402 339 ntBASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 PTP4A1P4-201ENST00000512479 322 ntBASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 TRMT112P2-201ENST00000512910 132 ntBASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 Y_RNA.673-201ENST00000516306 88 ntBASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 RNU6-970P-201ENST00000516312 107 ntBASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 SNORA44.1-201ENST00000517031 108 ntBASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 MTND4P7-201ENST00000523876 130 ntBASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 AC087441.2-201ENST00000529141 262 ntBASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 AC090115.3-201ENST00000553218 849 ntBASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.85□□□□□ -2.11
RPAP3Q9H6T3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
RPAP3Q9H6T3 Y_RNA.51-201ENST00000362725 102 ntBASIC1.84□□□□□ -2.11
RPAP3Q9H6T3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.84□□□□□ -2.11
RPAP3Q9H6T3 SNORD37.1-201ENST00000390968 65 ntBASIC1.84□□□□□ -2.11
RPAP3Q9H6T3 AL590135.1-201ENST00000422215 156 ntBASIC1.84□□□□□ -2.11
RPAP3Q9H6T3 AC019205.3-201ENST00000424573 156 ntBASIC1.84□□□□□ -2.11
RPAP3Q9H6T3 SNAP23P1-201ENST00000433229 246 ntBASIC1.84□□□□□ -2.11
RPAP3Q9H6T3 AC016700.2-201ENST00000446011 156 ntBASIC1.84□□□□□ -2.11
RPAP3Q9H6T3 MTCO2P18-201ENST00000457151 658 ntBASIC1.84□□□□□ -2.11
RPAP3Q9H6T3 AC015911.1-201ENST00000495111 156 ntBASIC1.84□□□□□ -2.11
RPAP3Q9H6T3 SNORA40.12-201ENST00000516329 111 ntBASIC1.84□□□□□ -2.11
RPAP3Q9H6T3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.84□□□□□ -2.11
RPAP3Q9H6T3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.84□□□□□ -2.11
RPAP3Q9H6T3 HSPE1P4-201ENST00000550617 308 ntBASIC1.84□□□□□ -2.11
RPAP3Q9H6T3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.84□□□□□ -2.11
RPAP3Q9H6T3 MIR4424-201ENST00000585257 86 ntBASIC1.84□□□□□ -2.11
RPAP3Q9H6T3 AC010928.2-201ENST00000588017 287 ntBASIC1.84□□□□□ -2.11
RPAP3Q9H6T3 AC087683.1-201ENST00000591187 441 ntBASIC1.84□□□□□ -2.11
RPAP3Q9H6T3 AC139792.3-201ENST00000623525 224 ntBASIC1.84□□□□□ -2.11
RPAP3Q9H6T3 SNORD32A-201ENST00000364805 84 ntBASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 SNORD14D-201ENST00000384390 87 ntBASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 MIR29C-201ENST00000385231 88 ntBASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 MIR1283-2-201ENST00000408621 87 ntBASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 SRIP3-201ENST00000413200 219 ntBASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 AC244670.1-201ENST00000436879 112 ntBASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 AC093259.1-201ENST00000509755 300 ntBASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 TRAV32-201ENST00000553993 340 ntBASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 AC015720.1-201ENST00000565251 277 ntBASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 MIR3136-201ENST00000583498 78 ntBASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 BX248123.2-201ENST00000606318 124 ntBASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 AC017083.3-201ENST00000609955 700 ntBASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 AC245060.5-201ENST00000610778 3293 ntBASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.83□□□□□ -2.12
RPAP3Q9H6T3 AP000560.1-201ENST00000624150 1937 ntBASIC1.82□□□□□ -2.12
RPAP3Q9H6T3 RNU6-142P-201ENST00000384019 107 ntBASIC1.82□□□□□ -2.12
RPAP3Q9H6T3 SNORA36A-201ENST00000384221 132 ntBASIC1.82□□□□□ -2.12
RPAP3Q9H6T3 SNORA67.6-201ENST00000391093 99 ntBASIC1.82□□□□□ -2.12
RPAP3Q9H6T3 MIR1323-201ENST00000408090 73 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms