Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AL133475.1-201ENST00000404414 305 ntBASIC2.75□□□□□ -1.97
CDT1Q9H211 MIR548F4-201ENST00000408515 105 ntBASIC2.75□□□□□ -1.97
CDT1Q9H211 RPL23AP50-201ENST00000434149 455 ntBASIC2.75□□□□□ -1.97
CDT1Q9H211 AL513328.1-201ENST00000446460 224 ntBASIC2.75□□□□□ -1.97
CDT1Q9H211 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.75□□□□□ -1.97
CDT1Q9H211 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.75□□□□□ -1.97
CDT1Q9H211 RNA5SP76-201ENST00000516277 87 ntBASIC2.75□□□□□ -1.97
CDT1Q9H211 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.75□□□□□ -1.97
CDT1Q9H211 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.75□□□□□ -1.97
CDT1Q9H211 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.75□□□□□ -1.97
CDT1Q9H211 AL391813.1-201ENST00000603098 260 ntBASIC2.75□□□□□ -1.97
CDT1Q9H211 AC018889.1-201ENST00000605372 397 ntBASIC2.75□□□□□ -1.97
CDT1Q9H211 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDT1Q9H211 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDT1Q9H211 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDT1Q9H211 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDT1Q9H211 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDT1Q9H211 Y_RNA.153-201ENST00000363615 91 ntBASIC2.74□□□□□ -1.97
CDT1Q9H211 RNU6-450P-201ENST00000364654 107 ntBASIC2.74□□□□□ -1.97
CDT1Q9H211 RNU6-463P-201ENST00000384340 107 ntBASIC2.74□□□□□ -1.97
CDT1Q9H211 RNU6-843P-201ENST00000384454 104 ntBASIC2.74□□□□□ -1.97
CDT1Q9H211 Y_RNA.557-201ENST00000384680 107 ntBASIC2.74□□□□□ -1.97
CDT1Q9H211 MIR887-201ENST00000401258 79 ntBASIC2.74□□□□□ -1.97
CDT1Q9H211 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.74□□□□□ -1.97
CDT1Q9H211 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.74□□□□□ -1.97
CDT1Q9H211 AL353752.1-201ENST00000454946 260 ntBASIC2.74□□□□□ -1.97
CDT1Q9H211 U8.20-201ENST00000459445 131 ntBASIC2.74□□□□□ -1.97
CDT1Q9H211 AP001025.1-201ENST00000486139 332 ntBASIC2.74□□□□□ -1.97
CDT1Q9H211 GZMAP1-201ENST00000503054 631 ntBASIC2.74□□□□□ -1.97
CDT1Q9H211 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.74□□□□□ -1.97
CDT1Q9H211 MRPS36P2-201ENST00000512569 299 ntBASIC2.74□□□□□ -1.97
CDT1Q9H211 RNU5F-8P-201ENST00000515941 111 ntBASIC2.74□□□□□ -1.97
CDT1Q9H211 RNA5SP385-201ENST00000515947 110 ntBASIC2.74□□□□□ -1.97
CDT1Q9H211 RNU6-764P-201ENST00000516396 105 ntBASIC2.74□□□□□ -1.97
CDT1Q9H211 SNORA31.18-201ENST00000517043 134 ntBASIC2.74□□□□□ -1.97
CDT1Q9H211 AC109329.2-201ENST00000519658 482 ntBASIC2.74□□□□□ -1.97
CDT1Q9H211 HSPE1P20-201ENST00000538133 289 ntBASIC2.74□□□□□ -1.97
CDT1Q9H211 AL117187.1-201ENST00000555482 181 ntBASIC2.74□□□□□ -1.97
CDT1Q9H211 U4.3-201ENST00000621047 82 ntBASIC2.74□□□□□ -1.97
CDT1Q9H211 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.74□□□□□ -1.97
CDT1Q9H211 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.74□□□□□ -1.97
CDT1Q9H211 IGHVIII-44-202ENST00000636235 289 ntBASIC2.74□□□□□ -1.97
CDT1Q9H211 MIR3529-201ENST00000637713 78 ntBASIC2.74□□□□□ -1.97
CDT1Q9H211 AC241585.2-209ENST00000638217 143 ntBASIC2.74□□□□□ -1.97
CDT1Q9H211 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.74□□□□□ -1.97
CDT1Q9H211 RBBP8P1-201ENST00000449447 1844 ntBASIC2.74□□□□□ -1.97
CDT1Q9H211 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.74□□□□□ -1.97
CDT1Q9H211 MAPK10-266ENST00000641066 6555 ntBASIC2.74□□□□□ -1.97
CDT1Q9H211 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
CDT1Q9H211 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.74□□□□□ -1.97
CDT1Q9H211 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.74□□□□□ -1.97
CDT1Q9H211 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CDT1Q9H211 RNU6-596P-201ENST00000365395 98 ntBASIC2.73□□□□□ -1.97
CDT1Q9H211 RNU6-933P-201ENST00000384424 107 ntBASIC2.73□□□□□ -1.97
CDT1Q9H211 SNORA67.4-201ENST00000384688 142 ntBASIC2.73□□□□□ -1.97
CDT1Q9H211 MIR147B-201ENST00000390185 80 ntBASIC2.73□□□□□ -1.97
CDT1Q9H211 AL513475.1-201ENST00000406602 315 ntBASIC2.73□□□□□ -1.97
CDT1Q9H211 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.73□□□□□ -1.97
CDT1Q9H211 RPL21P2-201ENST00000440049 481 ntBASIC2.73□□□□□ -1.97
CDT1Q9H211 AC243964.1-201ENST00000441814 261 ntBASIC2.73□□□□□ -1.97
CDT1Q9H211 AC007969.2-201ENST00000441891 191 ntBASIC2.73□□□□□ -1.97
CDT1Q9H211 AC012308.1-201ENST00000451232 178 ntBASIC2.73□□□□□ -1.97
CDT1Q9H211 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.73□□□□□ -1.97
CDT1Q9H211 RPS29P27-201ENST00000463711 170 ntBASIC2.73□□□□□ -1.97
CDT1Q9H211 AC133134.1-201ENST00000466800 359 ntBASIC2.73□□□□□ -1.97
CDT1Q9H211 AC107626.1-201ENST00000471084 183 ntBASIC2.73□□□□□ -1.97
CDT1Q9H211 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.73□□□□□ -1.97
CDT1Q9H211 RNU6-612P-201ENST00000516909 102 ntBASIC2.73□□□□□ -1.97
CDT1Q9H211 SNORD116.3-201ENST00000517176 78 ntBASIC2.73□□□□□ -1.97
CDT1Q9H211 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.73□□□□□ -1.97
CDT1Q9H211 AC008269.2-201ENST00000561915 1105 ntBASIC2.73□□□□□ -1.97
CDT1Q9H211 SUB1P3-201ENST00000564581 315 ntBASIC2.73□□□□□ -1.97
CDT1Q9H211 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.73□□□□□ -1.97
CDT1Q9H211 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.73□□□□□ -1.97
CDT1Q9H211 AC138305.3-201ENST00000624988 240 ntBASIC2.73□□□□□ -1.97
CDT1Q9H211 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
CDT1Q9H211 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.72□□□□□ -1.97
CDT1Q9H211 SNORD50.1-201ENST00000362987 71 ntBASIC2.72□□□□□ -1.97
CDT1Q9H211 U8.9-201ENST00000365667 134 ntBASIC2.72□□□□□ -1.97
CDT1Q9H211 Y_RNA.428-201ENST00000384078 102 ntBASIC2.72□□□□□ -1.97
CDT1Q9H211 RNU6-748P-201ENST00000384648 107 ntBASIC2.72□□□□□ -1.97
CDT1Q9H211 MIR521-1-201ENST00000384902 87 ntBASIC2.72□□□□□ -1.97
CDT1Q9H211 MIR627-201ENST00000384979 97 ntBASIC2.72□□□□□ -1.97
CDT1Q9H211 RNA5SP492-201ENST00000411330 114 ntBASIC2.72□□□□□ -1.97
CDT1Q9H211 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.72□□□□□ -1.97
CDT1Q9H211 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.72□□□□□ -1.97
CDT1Q9H211 MTND3P9-201ENST00000429526 346 ntBASIC2.72□□□□□ -1.97
CDT1Q9H211 U8.21-201ENST00000459536 136 ntBASIC2.72□□□□□ -1.97
CDT1Q9H211 RPL31P41-201ENST00000477967 372 ntBASIC2.72□□□□□ -1.97
CDT1Q9H211 SEM1P1-201ENST00000506694 209 ntBASIC2.72□□□□□ -1.97
CDT1Q9H211 RNU6-237P-201ENST00000515985 71 ntBASIC2.72□□□□□ -1.97
CDT1Q9H211 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CDT1Q9H211 MIR4506-201ENST00000584693 77 ntBASIC2.72□□□□□ -1.97
CDT1Q9H211 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CDT1Q9H211 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.71□□□□□ -1.98
CDT1Q9H211 RNU6-505P-201ENST00000384427 107 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 Y_RNA.512-201ENST00000384518 102 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 RNU6-1156P-201ENST00000410365 100 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 RNU6-1140P-201ENST00000410517 106 ntBASIC2.71□□□□□ -1.98
CDT1Q9H211 RNU2-23P-201ENST00000410545 195 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms