Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 RNVU1-4-201ENST00000612985 164 ntBASIC3.6□□□□□ -1.83
RNF38Q9H0F5 AC024581.2-201ENST00000619986 252 ntBASIC3.6□□□□□ -1.83
RNF38Q9H0F5 AC091953.5-201ENST00000622919 233 ntBASIC3.6□□□□□ -1.83
RNF38Q9H0F5 SNORA43.4-201ENST00000629559 138 ntBASIC3.6□□□□□ -1.83
RNF38Q9H0F5 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RNF38Q9H0F5 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF38Q9H0F5 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RNF38Q9H0F5 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RNF38Q9H0F5 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF38Q9H0F5 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.6□□□□□ -1.83
RNF38Q9H0F5 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.59□□□□□ -1.83
RNF38Q9H0F5 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RNF38Q9H0F5 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RNF38Q9H0F5 ADAM3A-203ENST00000461344 2157 ntBASIC3.59□□□□□ -1.83
RNF38Q9H0F5 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RNF38Q9H0F5 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.59□□□□□ -1.83
RNF38Q9H0F5 SNORD32A-201ENST00000364805 84 ntBASIC3.59□□□□□ -1.83
RNF38Q9H0F5 SNORA36A-201ENST00000384221 132 ntBASIC3.59□□□□□ -1.83
RNF38Q9H0F5 RNU1-101P-201ENST00000391171 127 ntBASIC3.59□□□□□ -1.83
RNF38Q9H0F5 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.59□□□□□ -1.83
RNF38Q9H0F5 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.59□□□□□ -1.83
RNF38Q9H0F5 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.59□□□□□ -1.83
RNF38Q9H0F5 HMGN2P10-201ENST00000448085 265 ntBASIC3.59□□□□□ -1.83
RNF38Q9H0F5 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.59□□□□□ -1.83
RNF38Q9H0F5 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.59□□□□□ -1.83
RNF38Q9H0F5 RN7SL601P-201ENST00000471221 293 ntBASIC3.59□□□□□ -1.83
RNF38Q9H0F5 MRPL42P6-201ENST00000486397 371 ntBASIC3.59□□□□□ -1.83
RNF38Q9H0F5 RNY3P16-201ENST00000516338 101 ntBASIC3.59□□□□□ -1.83
RNF38Q9H0F5 RN7SKP49-201ENST00000516675 260 ntBASIC3.59□□□□□ -1.83
RNF38Q9H0F5 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.59□□□□□ -1.83
RNF38Q9H0F5 AC026333.2-201ENST00000542164 106 ntBASIC3.59□□□□□ -1.83
RNF38Q9H0F5 AC021739.1-201ENST00000559631 174 ntBASIC3.59□□□□□ -1.83
RNF38Q9H0F5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.59□□□□□ -1.83
RNF38Q9H0F5 MIR5195-201ENST00000583555 115 ntBASIC3.59□□□□□ -1.83
RNF38Q9H0F5 AC008749.1-201ENST00000597650 306 ntBASIC3.59□□□□□ -1.83
RNF38Q9H0F5 AC072026.1-201ENST00000605023 201 ntBASIC3.59□□□□□ -1.83
RNF38Q9H0F5 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.59□□□□□ -1.83
RNF38Q9H0F5 AC104465.1-201ENST00000611365 139 ntBASIC3.59□□□□□ -1.83
RNF38Q9H0F5 AL590240.4-201ENST00000616908 390 ntBASIC3.59□□□□□ -1.83
RNF38Q9H0F5 MIR6134-201ENST00000617606 109 ntBASIC3.59□□□□□ -1.83
RNF38Q9H0F5 MIR3199-2-201ENST00000636243 86 ntBASIC3.59□□□□□ -1.83
RNF38Q9H0F5 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RNF38Q9H0F5 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
RNF38Q9H0F5 AL359854.1-201ENST00000614203 1594 ntBASIC3.59□□□□□ -1.84
RNF38Q9H0F5 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
RNF38Q9H0F5 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RNF38Q9H0F5 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF38Q9H0F5 RNU6-1175P-201ENST00000365200 107 ntBASIC3.58□□□□□ -1.84
RNF38Q9H0F5 Y_RNA.383-201ENST00000383855 97 ntBASIC3.58□□□□□ -1.84
RNF38Q9H0F5 Y_RNA.446-201ENST00000384178 104 ntBASIC3.58□□□□□ -1.84
RNF38Q9H0F5 U8.10-201ENST00000384260 133 ntBASIC3.58□□□□□ -1.84
RNF38Q9H0F5 RNU6-804P-201ENST00000384286 107 ntBASIC3.58□□□□□ -1.84
RNF38Q9H0F5 RNU6-1289P-201ENST00000384431 106 ntBASIC3.58□□□□□ -1.84
RNF38Q9H0F5 EI24P2-201ENST00000397776 1076 ntBASIC3.58□□□□□ -1.84
RNF38Q9H0F5 RN7SKP111-201ENST00000410349 271 ntBASIC3.58□□□□□ -1.84
RNF38Q9H0F5 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.58□□□□□ -1.84
RNF38Q9H0F5 RPS15AP5-201ENST00000436276 388 ntBASIC3.58□□□□□ -1.84
RNF38Q9H0F5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.58□□□□□ -1.84
RNF38Q9H0F5 Y_RNA.638-201ENST00000459374 113 ntBASIC3.58□□□□□ -1.84
RNF38Q9H0F5 AC091021.1-201ENST00000468051 388 ntBASIC3.58□□□□□ -1.84
RNF38Q9H0F5 COX6CP14-201ENST00000469580 174 ntBASIC3.58□□□□□ -1.84
RNF38Q9H0F5 RPS29P26-201ENST00000477483 171 ntBASIC3.58□□□□□ -1.84
RNF38Q9H0F5 MTND5P41-201ENST00000517498 206 ntBASIC3.58□□□□□ -1.84
RNF38Q9H0F5 AK6P2-201ENST00000549020 471 ntBASIC3.58□□□□□ -1.84
RNF38Q9H0F5 MIR4423-201ENST00000580922 80 ntBASIC3.58□□□□□ -1.84
RNF38Q9H0F5 AC011921.3-201ENST00000605540 361 ntBASIC3.58□□□□□ -1.84
RNF38Q9H0F5 AC006001.4-201ENST00000622243 395 ntBASIC3.58□□□□□ -1.84
RNF38Q9H0F5 MIR3651-201ENST00000630427 90 ntBASIC3.58□□□□□ -1.84
RNF38Q9H0F5 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.58□□□□□ -1.84
RNF38Q9H0F5 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
RNF38Q9H0F5 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF38Q9H0F5 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.58□□□□□ -1.84
RNF38Q9H0F5 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF38Q9H0F5 AL356274.2-201ENST00000624379 3752 ntBASIC3.58□□□□□ -1.84
RNF38Q9H0F5 RNU5B-2P-201ENST00000363036 113 ntBASIC3.57□□□□□ -1.84
RNF38Q9H0F5 RNU6-283P-201ENST00000364788 107 ntBASIC3.57□□□□□ -1.84
RNF38Q9H0F5 RNU6-142P-201ENST00000384019 107 ntBASIC3.57□□□□□ -1.84
RNF38Q9H0F5 RNU6-281P-201ENST00000384212 103 ntBASIC3.57□□□□□ -1.84
RNF38Q9H0F5 Y_RNA.570-201ENST00000384750 101 ntBASIC3.57□□□□□ -1.84
RNF38Q9H0F5 MIR544A-201ENST00000384855 91 ntBASIC3.57□□□□□ -1.84
RNF38Q9H0F5 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
RNF38Q9H0F5 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.57□□□□□ -1.84
RNF38Q9H0F5 AC006989.1-201ENST00000427212 131 ntBASIC3.57□□□□□ -1.84
RNF38Q9H0F5 MTCO1P5-201ENST00000433573 344 ntBASIC3.57□□□□□ -1.84
RNF38Q9H0F5 GPM6BP3-201ENST00000442797 145 ntBASIC3.57□□□□□ -1.84
RNF38Q9H0F5 AC009237.7-201ENST00000447357 229 ntBASIC3.57□□□□□ -1.84
RNF38Q9H0F5 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
RNF38Q9H0F5 snoU13.6-201ENST00000458785 104 ntBASIC3.57□□□□□ -1.84
RNF38Q9H0F5 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.57□□□□□ -1.84
RNF38Q9H0F5 AC068647.1-201ENST00000489539 2265 ntBASIC3.57□□□□□ -1.84
RNF38Q9H0F5 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.57□□□□□ -1.84
RNF38Q9H0F5 HSPE1P4-201ENST00000550617 308 ntBASIC3.57□□□□□ -1.84
RNF38Q9H0F5 AC004832.4-201ENST00000608952 331 ntBASIC3.57□□□□□ -1.84
RNF38Q9H0F5 RMST_8.1-201ENST00000610287 165 ntBASIC3.57□□□□□ -1.84
RNF38Q9H0F5 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.57□□□□□ -1.84
RNF38Q9H0F5 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.57□□□□□ -1.84
RNF38Q9H0F5 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
RNF38Q9H0F5 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RNF38Q9H0F5 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
RNF38Q9H0F5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms