Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM55Q9BYV6 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM55Q9BYV6 AL357552.1-201ENST00000445254 415 ntBASIC3.54□□□□□ -1.84
TRIM55Q9BYV6 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM55Q9BYV6 SNORA25.14-201ENST00000516481 132 ntBASIC3.54□□□□□ -1.84
TRIM55Q9BYV6 RNU6-897P-201ENST00000517135 105 ntBASIC3.54□□□□□ -1.84
TRIM55Q9BYV6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM55Q9BYV6 AC026333.2-201ENST00000542164 106 ntBASIC3.54□□□□□ -1.84
TRIM55Q9BYV6 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM55Q9BYV6 AC105245.1-201ENST00000581934 244 ntBASIC3.54□□□□□ -1.84
TRIM55Q9BYV6 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
TRIM55Q9BYV6 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM55Q9BYV6 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM55Q9BYV6 AC073346.2-201ENST00000624724 2058 ntBASIC3.54□□□□□ -1.84
TRIM55Q9BYV6 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM55Q9BYV6 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 Y_RNA.214-201ENST00000364201 112 ntBASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 RNA5SP72-201ENST00000364442 117 ntBASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 RNU6-574P-201ENST00000384265 107 ntBASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 MIR329-1-201ENST00000385028 80 ntBASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 MIR29B2-201ENST00000385055 81 ntBASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 SNORA12-201ENST00000391162 147 ntBASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 U6atac.2-201ENST00000408644 118 ntBASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 SNORD12B-201ENST00000410433 91 ntBASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 RNA5SP293-201ENST00000410527 113 ntBASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 ELOCP20-201ENST00000422460 345 ntBASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 AC021205.2-201ENST00000480069 347 ntBASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 RN7SKP18-201ENST00000516005 275 ntBASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 RN7SKP49-201ENST00000516675 260 ntBASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 AP002404.1-201ENST00000532005 451 ntBASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 AC240442.1-201ENST00000616055 283 ntBASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 AC010205.1-201ENST00000616668 449 ntBASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 MIR7975-201ENST00000619350 68 ntBASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM55Q9BYV6 AC093908.1-201ENST00000623125 8092 ntBASIC3.53□□□□□ -1.85
TRIM55Q9BYV6 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
TRIM55Q9BYV6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM55Q9BYV6 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM55Q9BYV6 RNU5F-3P-201ENST00000363767 117 ntBASIC3.52□□□□□ -1.85
TRIM55Q9BYV6 RNU6-245P-201ENST00000384020 107 ntBASIC3.52□□□□□ -1.85
TRIM55Q9BYV6 RNU6-611P-201ENST00000384276 104 ntBASIC3.52□□□□□ -1.85
TRIM55Q9BYV6 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM55Q9BYV6 HMGN1P18-201ENST00000457642 277 ntBASIC3.52□□□□□ -1.85
TRIM55Q9BYV6 SNORA70.19-201ENST00000516717 90 ntBASIC3.52□□□□□ -1.85
TRIM55Q9BYV6 SNORA40.15-201ENST00000516884 107 ntBASIC3.52□□□□□ -1.85
TRIM55Q9BYV6 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.52□□□□□ -1.85
TRIM55Q9BYV6 AC026470.2-201ENST00000561492 181 ntBASIC3.52□□□□□ -1.85
TRIM55Q9BYV6 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM55Q9BYV6 MIR4659A-201ENST00000580269 81 ntBASIC3.52□□□□□ -1.85
TRIM55Q9BYV6 AL713866.2-201ENST00000603579 219 ntBASIC3.52□□□□□ -1.85
TRIM55Q9BYV6 SNRPGP20-201ENST00000604477 205 ntBASIC3.52□□□□□ -1.85
TRIM55Q9BYV6 AC011476.5-201ENST00000615594 130 ntBASIC3.52□□□□□ -1.85
TRIM55Q9BYV6 AC018692.3-201ENST00000623929 123 ntBASIC3.52□□□□□ -1.85
TRIM55Q9BYV6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM55Q9BYV6 MAPK10-266ENST00000641066 6555 ntBASIC3.52□□□□□ -1.85
TRIM55Q9BYV6 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM55Q9BYV6 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM55Q9BYV6 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM55Q9BYV6 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM55Q9BYV6 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM55Q9BYV6 RNU6-926P-201ENST00000384075 107 ntBASIC3.51□□□□□ -1.85
TRIM55Q9BYV6 RNU6-1145P-201ENST00000384246 107 ntBASIC3.51□□□□□ -1.85
TRIM55Q9BYV6 Y_RNA.512-201ENST00000384518 102 ntBASIC3.51□□□□□ -1.85
TRIM55Q9BYV6 MIR320B2-201ENST00000408479 138 ntBASIC3.51□□□□□ -1.85
TRIM55Q9BYV6 AC126124.2-201ENST00000413542 321 ntBASIC3.51□□□□□ -1.85
TRIM55Q9BYV6 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.51□□□□□ -1.85
TRIM55Q9BYV6 CYCSP35-201ENST00000451978 304 ntBASIC3.51□□□□□ -1.85
TRIM55Q9BYV6 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM55Q9BYV6 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.51□□□□□ -1.85
TRIM55Q9BYV6 MIR2276-201ENST00000516886 89 ntBASIC3.51□□□□□ -1.85
TRIM55Q9BYV6 DEFB131C-201ENST00000528817 165 ntBASIC3.51□□□□□ -1.85
TRIM55Q9BYV6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM55Q9BYV6 MIR4503-201ENST00000582187 83 ntBASIC3.51□□□□□ -1.85
TRIM55Q9BYV6 AC010999.1-201ENST00000611856 324 ntBASIC3.51□□□□□ -1.85
TRIM55Q9BYV6 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM55Q9BYV6 AC092435.3-201ENST00000565538 3654 ntBASIC3.51□□□□□ -1.85
TRIM55Q9BYV6 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.51□□□□□ -1.85
TRIM55Q9BYV6 AL049781.1-201ENST00000623195 3585 ntBASIC3.51□□□□□ -1.85
TRIM55Q9BYV6 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM55Q9BYV6 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM55Q9BYV6 MIR218-2-201ENST00000385006 110 ntBASIC3.5□□□□□ -1.85
TRIM55Q9BYV6 MIR1302-3-201ENST00000408128 138 ntBASIC3.5□□□□□ -1.85
TRIM55Q9BYV6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
TRIM55Q9BYV6 AC027124.2-201ENST00000428249 105 ntBASIC3.5□□□□□ -1.85
TRIM55Q9BYV6 AL731563.1-201ENST00000442202 214 ntBASIC3.5□□□□□ -1.85
TRIM55Q9BYV6 DYNLT3P2-201ENST00000442517 295 ntBASIC3.5□□□□□ -1.85
TRIM55Q9BYV6 AC010095.1-201ENST00000443543 144 ntBASIC3.5□□□□□ -1.85
TRIM55Q9BYV6 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.5□□□□□ -1.85
TRIM55Q9BYV6 RN7SL594P-201ENST00000470590 287 ntBASIC3.5□□□□□ -1.85
TRIM55Q9BYV6 AC092185.1-201ENST00000491371 97 ntBASIC3.5□□□□□ -1.85
TRIM55Q9BYV6 RNY3P15-201ENST00000516297 97 ntBASIC3.5□□□□□ -1.85
TRIM55Q9BYV6 HSPE1P18-201ENST00000517602 280 ntBASIC3.5□□□□□ -1.85
TRIM55Q9BYV6 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.5□□□□□ -1.85
TRIM55Q9BYV6 AC069294.1-201ENST00000608397 350 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms