Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.95□□□□□ -1.94
TRIM54Q9BYV2 RPL30P11-203ENST00000598995 310 ntBASIC2.95□□□□□ -1.94
TRIM54Q9BYV2 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.95□□□□□ -1.94
TRIM54Q9BYV2 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.95□□□□□ -1.94
TRIM54Q9BYV2 AL355596.1-201ENST00000565399 3996 ntBASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 Y_RNA.106-201ENST00000363189 100 ntBASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 Y_RNA.111-201ENST00000363248 100 ntBASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 Y_RNA.319-201ENST00000365138 92 ntBASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 MIR218-1-201ENST00000384999 110 ntBASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 RN7SKP220-201ENST00000410611 288 ntBASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 RN7SKP123-201ENST00000410732 291 ntBASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 RPS26P42-201ENST00000413485 326 ntBASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 USP9YP16-201ENST00000430287 407 ntBASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 USP9YP23-201ENST00000455085 407 ntBASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 RPS3P1-201ENST00000456781 192 ntBASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 AC140059.1-201ENST00000489238 361 ntBASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 RN7SL504P-201ENST00000494496 287 ntBASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 ANXA2P1-201ENST00000505539 926 ntBASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 RNU4-77P-201ENST00000516692 156 ntBASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 COX6CP5-201ENST00000527162 228 ntBASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 MIR4298-201ENST00000584380 73 ntBASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 AC087588.2-201ENST00000617667 426 ntBASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 U2.1-201ENST00000618978 145 ntBASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 AC243829.7-201ENST00000633081 225 ntBASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 MIR4272-201ENST00000635924 64 ntBASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 MTND4P1-201ENST00000457501 1466 ntBASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
TRIM54Q9BYV2 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 snoU2_19.1-201ENST00000362361 80 ntBASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 RNU6-874P-201ENST00000362390 105 ntBASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 Y_RNA.80-201ENST00000362996 102 ntBASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 Y_RNA.158-201ENST00000363651 101 ntBASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 RNY3P11-201ENST00000364153 102 ntBASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 MIR606-201ENST00000384851 96 ntBASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 RNU6-1328P-201ENST00000410938 106 ntBASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 RNA5SP344-201ENST00000411081 104 ntBASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 AC114482.1-201ENST00000418010 247 ntBASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 AC096644.2-201ENST00000429278 159 ntBASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 AL353752.1-201ENST00000454946 260 ntBASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 AP002404.1-201ENST00000532005 451 ntBASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 AC006600.1-201ENST00000572529 153 ntBASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 VN1R91P-201ENST00000594377 169 ntBASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 AC078899.3-201ENST00000599065 212 ntBASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 PART1_1.1-201ENST00000611761 217 ntBASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 AL132822.1-201ENST00000617063 513 ntBASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM54Q9BYV2 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 Y_RNA.358-201ENST00000365491 99 ntBASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 U8.9-201ENST00000365667 134 ntBASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 U8.10-201ENST00000384260 133 ntBASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 RNU6-1160P-201ENST00000384546 104 ntBASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 RNU6-1093P-201ENST00000391194 107 ntBASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 NDUFB4P4-201ENST00000404822 243 ntBASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 U6atac.2-201ENST00000408644 118 ntBASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 Y_RNA.592-201ENST00000410274 109 ntBASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 AL513477.1-202ENST00000417061 214 ntBASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 RPL30P4-201ENST00000429309 333 ntBASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 AC022018.1-201ENST00000430685 241 ntBASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 AP000705.1-201ENST00000454567 350 ntBASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 RPS29P2-201ENST00000479278 136 ntBASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 RPL23AP70-201ENST00000483361 460 ntBASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 RNU6-911P-201ENST00000516523 104 ntBASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 AC090617.3-201ENST00000573670 475 ntBASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 AC105245.1-201ENST00000581934 244 ntBASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 AC069294.1-201ENST00000608397 350 ntBASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 AC090517.3-201ENST00000625170 141 ntBASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
TRIM54Q9BYV2 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms