Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AC027288.2-201ENST00000553028 243 ntBASIC3.16□□□□□ -1.9
NDC1Q9BTX1 MIR5571-201ENST00000577998 113 ntBASIC3.16□□□□□ -1.9
NDC1Q9BTX1 MIR4474-201ENST00000579189 78 ntBASIC3.16□□□□□ -1.9
NDC1Q9BTX1 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.16□□□□□ -1.9
NDC1Q9BTX1 AC137590.2-201ENST00000619709 240 ntBASIC3.16□□□□□ -1.9
NDC1Q9BTX1 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NDC1Q9BTX1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
NDC1Q9BTX1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
NDC1Q9BTX1 Y_RNA.54-201ENST00000362766 105 ntBASIC3.15□□□□□ -1.91
NDC1Q9BTX1 SNORA36A-201ENST00000384221 132 ntBASIC3.15□□□□□ -1.91
NDC1Q9BTX1 RNU6-102P-201ENST00000384485 104 ntBASIC3.15□□□□□ -1.91
NDC1Q9BTX1 RNU4-70P-201ENST00000384579 139 ntBASIC3.15□□□□□ -1.91
NDC1Q9BTX1 RNU6-750P-201ENST00000390946 107 ntBASIC3.15□□□□□ -1.91
NDC1Q9BTX1 RNU2-14P-201ENST00000411053 191 ntBASIC3.15□□□□□ -1.91
NDC1Q9BTX1 WARS2P1-201ENST00000429678 537 ntBASIC3.15□□□□□ -1.91
NDC1Q9BTX1 AC244670.1-201ENST00000436879 112 ntBASIC3.15□□□□□ -1.91
NDC1Q9BTX1 AC096638.1-201ENST00000444678 216 ntBASIC3.15□□□□□ -1.91
NDC1Q9BTX1 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.15□□□□□ -1.91
NDC1Q9BTX1 RPS23P5-201ENST00000495419 428 ntBASIC3.15□□□□□ -1.91
NDC1Q9BTX1 RPL7P47-201ENST00000497299 556 ntBASIC3.15□□□□□ -1.91
NDC1Q9BTX1 SCARNA24.2-201ENST00000516968 130 ntBASIC3.15□□□□□ -1.91
NDC1Q9BTX1 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.15□□□□□ -1.91
NDC1Q9BTX1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.15□□□□□ -1.91
NDC1Q9BTX1 AC025281.1-201ENST00000567026 265 ntBASIC3.15□□□□□ -1.91
NDC1Q9BTX1 MIR5680-201ENST00000577577 84 ntBASIC3.15□□□□□ -1.91
NDC1Q9BTX1 AC009779.6-201ENST00000603972 165 ntBASIC3.15□□□□□ -1.91
NDC1Q9BTX1 RNU6-91P-201ENST00000607774 107 ntBASIC3.15□□□□□ -1.91
NDC1Q9BTX1 MIR7112-201ENST00000616126 65 ntBASIC3.15□□□□□ -1.91
NDC1Q9BTX1 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.15□□□□□ -1.91
NDC1Q9BTX1 MIR8057-201ENST00000620957 69 ntBASIC3.15□□□□□ -1.91
NDC1Q9BTX1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.15□□□□□ -1.91
NDC1Q9BTX1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NDC1Q9BTX1 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NDC1Q9BTX1 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NDC1Q9BTX1 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NDC1Q9BTX1 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NDC1Q9BTX1 AC002543.1-201ENST00000299783 1954 ntBASIC3.14□□□□□ -1.91
NDC1Q9BTX1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
NDC1Q9BTX1 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NDC1Q9BTX1 AL079305.1-201ENST00000623159 3008 ntBASIC3.14□□□□□ -1.91
NDC1Q9BTX1 Y_RNA.65-201ENST00000362846 100 ntBASIC3.14□□□□□ -1.91
NDC1Q9BTX1 Y_RNA.277-201ENST00000364754 102 ntBASIC3.14□□□□□ -1.91
NDC1Q9BTX1 Y_RNA.319-201ENST00000365138 92 ntBASIC3.14□□□□□ -1.91
NDC1Q9BTX1 SNORD6-201ENST00000365444 73 ntBASIC3.14□□□□□ -1.91
NDC1Q9BTX1 MIR10B-201ENST00000385011 110 ntBASIC3.14□□□□□ -1.91
NDC1Q9BTX1 MIR147B-201ENST00000390185 80 ntBASIC3.14□□□□□ -1.91
NDC1Q9BTX1 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NDC1Q9BTX1 SNORD12B-201ENST00000410433 91 ntBASIC3.14□□□□□ -1.91
NDC1Q9BTX1 AL159169.1-201ENST00000421119 127 ntBASIC3.14□□□□□ -1.91
NDC1Q9BTX1 AL445305.1-201ENST00000432577 575 ntBASIC3.14□□□□□ -1.91
NDC1Q9BTX1 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.14□□□□□ -1.91
NDC1Q9BTX1 HMGN1P18-201ENST00000457642 277 ntBASIC3.14□□□□□ -1.91
NDC1Q9BTX1 CENPBD1P1-201ENST00000464061 469 ntBASIC3.14□□□□□ -1.91
NDC1Q9BTX1 RN7SL442P-201ENST00000473804 320 ntBASIC3.14□□□□□ -1.91
NDC1Q9BTX1 RNU6-496P-201ENST00000516145 99 ntBASIC3.14□□□□□ -1.91
NDC1Q9BTX1 AC022080.3-201ENST00000544433 482 ntBASIC3.14□□□□□ -1.91
NDC1Q9BTX1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NDC1Q9BTX1 AC021231.3-201ENST00000558497 370 ntBASIC3.14□□□□□ -1.91
NDC1Q9BTX1 UBL5P4-201ENST00000562584 236 ntBASIC3.14□□□□□ -1.91
NDC1Q9BTX1 AC105137.2-201ENST00000569073 466 ntBASIC3.14□□□□□ -1.91
NDC1Q9BTX1 AL359198.2-201ENST00000611836 194 ntBASIC3.14□□□□□ -1.91
NDC1Q9BTX1 AC005296.1-201ENST00000616145 209 ntBASIC3.14□□□□□ -1.91
NDC1Q9BTX1 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
NDC1Q9BTX1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
NDC1Q9BTX1 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
NDC1Q9BTX1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
NDC1Q9BTX1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NDC1Q9BTX1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
NDC1Q9BTX1 RNU6-1266P-201ENST00000362794 105 ntBASIC3.13□□□□□ -1.91
NDC1Q9BTX1 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NDC1Q9BTX1 RNU6-281P-201ENST00000384212 103 ntBASIC3.13□□□□□ -1.91
NDC1Q9BTX1 SNORD63-201ENST00000384262 68 ntBASIC3.13□□□□□ -1.91
NDC1Q9BTX1 AL603908.1-201ENST00000406098 201 ntBASIC3.13□□□□□ -1.91
NDC1Q9BTX1 SUMO1P2-201ENST00000452524 304 ntBASIC3.13□□□□□ -1.91
NDC1Q9BTX1 AC021205.2-201ENST00000480069 347 ntBASIC3.13□□□□□ -1.91
NDC1Q9BTX1 GZMAP1-201ENST00000503054 631 ntBASIC3.13□□□□□ -1.91
NDC1Q9BTX1 RNU6-58P-201ENST00000517143 103 ntBASIC3.13□□□□□ -1.91
NDC1Q9BTX1 AC115990.1-201ENST00000526957 301 ntBASIC3.13□□□□□ -1.91
NDC1Q9BTX1 AC130289.1-201ENST00000577321 73 ntBASIC3.13□□□□□ -1.91
NDC1Q9BTX1 MIR5695-201ENST00000579717 85 ntBASIC3.13□□□□□ -1.91
NDC1Q9BTX1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.13□□□□□ -1.91
NDC1Q9BTX1 AC012493.2-201ENST00000595083 291 ntBASIC3.13□□□□□ -1.91
NDC1Q9BTX1 YPEL5P2-201ENST00000605553 359 ntBASIC3.13□□□□□ -1.91
NDC1Q9BTX1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.13□□□□□ -1.91
NDC1Q9BTX1 uc_338.1-201ENST00000612113 180 ntBASIC3.13□□□□□ -1.91
NDC1Q9BTX1 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.13□□□□□ -1.91
NDC1Q9BTX1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.13□□□□□ -1.91
NDC1Q9BTX1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NDC1Q9BTX1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.12□□□□□ -1.91
NDC1Q9BTX1 RNU6-1159P-201ENST00000362933 107 ntBASIC3.12□□□□□ -1.91
NDC1Q9BTX1 Y_RNA.111-201ENST00000363248 100 ntBASIC3.12□□□□□ -1.91
NDC1Q9BTX1 RNU6-1285P-201ENST00000363480 105 ntBASIC3.12□□□□□ -1.91
NDC1Q9BTX1 RNU6-805P-201ENST00000365643 106 ntBASIC3.12□□□□□ -1.91
NDC1Q9BTX1 RNU6-159P-201ENST00000391080 106 ntBASIC3.12□□□□□ -1.91
NDC1Q9BTX1 SNORD58.1-201ENST00000391313 66 ntBASIC3.12□□□□□ -1.91
NDC1Q9BTX1 AL357075.1-201ENST00000404107 726 ntBASIC3.12□□□□□ -1.91
NDC1Q9BTX1 RNU4-47P-201ENST00000410876 114 ntBASIC3.12□□□□□ -1.91
NDC1Q9BTX1 AC138623.1-201ENST00000418060 216 ntBASIC3.12□□□□□ -1.91
NDC1Q9BTX1 AL365496.1-201ENST00000426885 215 ntBASIC3.12□□□□□ -1.91
NDC1Q9BTX1 AC005002.2-201ENST00000438228 269 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms