Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 RNU6-270P-201ENST00000364131 105 ntBASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 RNU4-56P-201ENST00000364700 142 ntBASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 Y_RNA.398-201ENST00000383952 99 ntBASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 RNU6-1248P-201ENST00000391096 64 ntBASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 RNU6-1135P-201ENST00000411083 103 ntBASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 AL451074.5-201ENST00000415894 435 ntBASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 AC006989.1-201ENST00000427212 131 ntBASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 SNRPGP5-201ENST00000456003 220 ntBASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 AC090525.1-201ENST00000479116 478 ntBASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 AC026333.2-201ENST00000542164 106 ntBASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 CYP4A27P-201ENST00000567218 190 ntBASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 MIR3136-201ENST00000583498 78 ntBASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 AC024220.1-201ENST00000603675 484 ntBASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 AC069200.1-201ENST00000609511 323 ntBASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 AC004467.1-201ENST00000615678 330 ntBASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 AC012314.7-201ENST00000619693 93 ntBASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 AC092628.2-201ENST00000622492 339 ntBASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 MIR3199-2-201ENST00000636243 86 ntBASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 AC068647.1-201ENST00000489539 2265 ntBASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ZKSCAN3Q9BRR0 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ZKSCAN3Q9BRR0 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.09□□□□□ -1.75
ZKSCAN3Q9BRR0 Y_RNA.101-201ENST00000363154 102 ntBASIC4.09□□□□□ -1.75
ZKSCAN3Q9BRR0 RNU6-81P-201ENST00000365608 104 ntBASIC4.09□□□□□ -1.75
ZKSCAN3Q9BRR0 RNU6-211P-201ENST00000384047 107 ntBASIC4.09□□□□□ -1.75
ZKSCAN3Q9BRR0 MIR183-201ENST00000384958 110 ntBASIC4.09□□□□□ -1.75
ZKSCAN3Q9BRR0 EI24P2-201ENST00000397776 1076 ntBASIC4.09□□□□□ -1.75
ZKSCAN3Q9BRR0 AL357139.1-201ENST00000407792 426 ntBASIC4.09□□□□□ -1.75
ZKSCAN3Q9BRR0 AC005300.1-201ENST00000428401 373 ntBASIC4.09□□□□□ -1.75
ZKSCAN3Q9BRR0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.09□□□□□ -1.75
ZKSCAN3Q9BRR0 RBMY2UP-201ENST00000453474 324 ntBASIC4.09□□□□□ -1.75
ZKSCAN3Q9BRR0 AC008155.2-201ENST00000464337 397 ntBASIC4.09□□□□□ -1.75
ZKSCAN3Q9BRR0 AC091179.3-201ENST00000474761 144 ntBASIC4.09□□□□□ -1.75
ZKSCAN3Q9BRR0 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.09□□□□□ -1.75
ZKSCAN3Q9BRR0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.09□□□□□ -1.75
ZKSCAN3Q9BRR0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.09□□□□□ -1.75
ZKSCAN3Q9BRR0 AC008739.3-201ENST00000603262 127 ntBASIC4.09□□□□□ -1.75
ZKSCAN3Q9BRR0 AC091932.3-201ENST00000624223 323 ntBASIC4.09□□□□□ -1.75
ZKSCAN3Q9BRR0 U6.105-201ENST00000637379 88 ntBASIC4.09□□□□□ -1.75
ZKSCAN3Q9BRR0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
ZKSCAN3Q9BRR0 AL353746.1-201ENST00000566293 6881 ntBASIC4.09□□□□□ -1.75
ZKSCAN3Q9BRR0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
ZKSCAN3Q9BRR0 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.09□□□□□ -1.76
ZKSCAN3Q9BRR0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.09□□□□□ -1.76
ZKSCAN3Q9BRR0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.09□□□□□ -1.76
ZKSCAN3Q9BRR0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.09□□□□□ -1.76
ZKSCAN3Q9BRR0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
ZKSCAN3Q9BRR0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ZKSCAN3Q9BRR0 RNU6-653P-201ENST00000363074 106 ntBASIC4.08□□□□□ -1.76
ZKSCAN3Q9BRR0 RNU6-799P-201ENST00000363567 107 ntBASIC4.08□□□□□ -1.76
ZKSCAN3Q9BRR0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ZKSCAN3Q9BRR0 ELOCP21-201ENST00000412558 336 ntBASIC4.08□□□□□ -1.76
ZKSCAN3Q9BRR0 IFNA11P-201ENST00000446352 526 ntBASIC4.08□□□□□ -1.76
ZKSCAN3Q9BRR0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.08□□□□□ -1.76
ZKSCAN3Q9BRR0 CYCSP35-201ENST00000451978 304 ntBASIC4.08□□□□□ -1.76
ZKSCAN3Q9BRR0 RN7SL594P-201ENST00000470590 287 ntBASIC4.08□□□□□ -1.76
ZKSCAN3Q9BRR0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.08□□□□□ -1.76
ZKSCAN3Q9BRR0 AC006445.2-201ENST00000510061 472 ntBASIC4.08□□□□□ -1.76
ZKSCAN3Q9BRR0 RNU2-27P-201ENST00000516185 142 ntBASIC4.08□□□□□ -1.76
ZKSCAN3Q9BRR0 RNU6-155P-201ENST00000516347 100 ntBASIC4.08□□□□□ -1.76
ZKSCAN3Q9BRR0 RNU6-966P-201ENST00000516479 104 ntBASIC4.08□□□□□ -1.76
ZKSCAN3Q9BRR0 MIR4738-201ENST00000579134 87 ntBASIC4.08□□□□□ -1.76
ZKSCAN3Q9BRR0 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.08□□□□□ -1.76
ZKSCAN3Q9BRR0 snoU18.1-201ENST00000629629 71 ntBASIC4.08□□□□□ -1.76
ZKSCAN3Q9BRR0 MTND1P7-201ENST00000632801 297 ntBASIC4.08□□□□□ -1.76
ZKSCAN3Q9BRR0 SNORD98-201ENST00000636377 67 ntBASIC4.08□□□□□ -1.76
ZKSCAN3Q9BRR0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ZKSCAN3Q9BRR0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.08□□□□□ -1.76
ZKSCAN3Q9BRR0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ZKSCAN3Q9BRR0 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
ZKSCAN3Q9BRR0 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZKSCAN3Q9BRR0 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ZKSCAN3Q9BRR0 RNU1-62P-201ENST00000362599 164 ntBASIC4.07□□□□□ -1.76
ZKSCAN3Q9BRR0 RNA5SP50-201ENST00000363731 107 ntBASIC4.07□□□□□ -1.76
ZKSCAN3Q9BRR0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
ZKSCAN3Q9BRR0 RNU2-54P-201ENST00000410299 190 ntBASIC4.07□□□□□ -1.76
ZKSCAN3Q9BRR0 CYCSP48-201ENST00000417124 323 ntBASIC4.07□□□□□ -1.76
ZKSCAN3Q9BRR0 AL161651.1-201ENST00000440882 223 ntBASIC4.07□□□□□ -1.76
ZKSCAN3Q9BRR0 IGKV2-26-201ENST00000518305 343 ntBASIC4.07□□□□□ -1.76
ZKSCAN3Q9BRR0 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.07□□□□□ -1.76
ZKSCAN3Q9BRR0 MIR3145-201ENST00000580727 82 ntBASIC4.07□□□□□ -1.76
ZKSCAN3Q9BRR0 AC005520.5-201ENST00000613926 164 ntBASIC4.07□□□□□ -1.76
ZKSCAN3Q9BRR0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.07□□□□□ -1.76
ZKSCAN3Q9BRR0 AC022149.2-201ENST00000621061 203 ntBASIC4.07□□□□□ -1.76
ZKSCAN3Q9BRR0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.07□□□□□ -1.76
ZKSCAN3Q9BRR0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.07□□□□□ -1.76
ZKSCAN3Q9BRR0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZKSCAN3Q9BRR0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ZKSCAN3Q9BRR0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ZKSCAN3Q9BRR0 AC004944.1-201ENST00000517807 3059 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms