Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.38□□□□□ -2.03
SDF4Q9BRK5 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.38□□□□□ -2.03
SDF4Q9BRK5 Z98751.3-201ENST00000604447 521 ntBASIC2.38□□□□□ -2.03
SDF4Q9BRK5 AP000654.2-201ENST00000605633 586 ntBASIC2.38□□□□□ -2.03
SDF4Q9BRK5 AL136221.1-201ENST00000621449 509 ntBASIC2.38□□□□□ -2.03
SDF4Q9BRK5 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.38□□□□□ -2.03
SDF4Q9BRK5 AC024614.3-201ENST00000637860 256 ntBASIC2.38□□□□□ -2.03
SDF4Q9BRK5 AC068137.4-201ENST00000638485 296 ntBASIC2.38□□□□□ -2.03
SDF4Q9BRK5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
SDF4Q9BRK5 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
SDF4Q9BRK5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SDF4Q9BRK5 SNORD114-1-201ENST00000362705 72 ntBASIC2.37□□□□□ -2.03
SDF4Q9BRK5 RNU6-1317P-201ENST00000364582 104 ntBASIC2.37□□□□□ -2.03
SDF4Q9BRK5 RNU6-26P-201ENST00000383985 107 ntBASIC2.37□□□□□ -2.03
SDF4Q9BRK5 SNORA6-201ENST00000384033 151 ntBASIC2.37□□□□□ -2.03
SDF4Q9BRK5 AL079342.1-201ENST00000401460 267 ntBASIC2.37□□□□□ -2.03
SDF4Q9BRK5 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.37□□□□□ -2.03
SDF4Q9BRK5 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.37□□□□□ -2.03
SDF4Q9BRK5 AMD1P1-201ENST00000457220 922 ntBASIC2.37□□□□□ -2.03
SDF4Q9BRK5 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.37□□□□□ -2.03
SDF4Q9BRK5 AC026371.1-201ENST00000551867 419 ntBASIC2.37□□□□□ -2.03
SDF4Q9BRK5 CPDP1-201ENST00000579660 283 ntBASIC2.37□□□□□ -2.03
SDF4Q9BRK5 PCGEM1.1-201ENST00000613431 131 ntBASIC2.37□□□□□ -2.03
SDF4Q9BRK5 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SDF4Q9BRK5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
SDF4Q9BRK5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SDF4Q9BRK5 Y_RNA.100-201ENST00000363141 102 ntBASIC2.36□□□□□ -2.03
SDF4Q9BRK5 U3.9-201ENST00000363823 204 ntBASIC2.36□□□□□ -2.03
SDF4Q9BRK5 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SDF4Q9BRK5 SNORD14D-201ENST00000384390 87 ntBASIC2.36□□□□□ -2.03
SDF4Q9BRK5 SNORA51.11-201ENST00000384442 131 ntBASIC2.36□□□□□ -2.03
SDF4Q9BRK5 SNORA12-201ENST00000391162 147 ntBASIC2.36□□□□□ -2.03
SDF4Q9BRK5 RNU6-332P-201ENST00000391193 108 ntBASIC2.36□□□□□ -2.03
SDF4Q9BRK5 AL030996.1-201ENST00000411430 235 ntBASIC2.36□□□□□ -2.03
SDF4Q9BRK5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SDF4Q9BRK5 MTCO1P29-201ENST00000496868 288 ntBASIC2.36□□□□□ -2.03
SDF4Q9BRK5 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.36□□□□□ -2.03
SDF4Q9BRK5 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.36□□□□□ -2.03
SDF4Q9BRK5 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.36□□□□□ -2.03
SDF4Q9BRK5 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.36□□□□□ -2.03
SDF4Q9BRK5 AC104984.5-201ENST00000586878 94 ntBASIC2.36□□□□□ -2.03
SDF4Q9BRK5 RMST_3.1-201ENST00000611651 109 ntBASIC2.36□□□□□ -2.03
SDF4Q9BRK5 MIR6715A-201ENST00000615929 79 ntBASIC2.36□□□□□ -2.03
SDF4Q9BRK5 MTND4P1-201ENST00000457501 1466 ntBASIC2.36□□□□□ -2.03
SDF4Q9BRK5 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SDF4Q9BRK5 AP006437.1-201ENST00000641440 3685 ntBASIC2.36□□□□□ -2.03
SDF4Q9BRK5 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SDF4Q9BRK5 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.35□□□□□ -2.03
SDF4Q9BRK5 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SDF4Q9BRK5 Y_RNA.99-201ENST00000363138 105 ntBASIC2.35□□□□□ -2.03
SDF4Q9BRK5 RNA5SP138-201ENST00000365098 114 ntBASIC2.35□□□□□ -2.03
SDF4Q9BRK5 Y_RNA.573-201ENST00000384763 105 ntBASIC2.35□□□□□ -2.03
SDF4Q9BRK5 RNA5SP338-201ENST00000410495 85 ntBASIC2.35□□□□□ -2.03
SDF4Q9BRK5 RNU6-325P-201ENST00000411132 105 ntBASIC2.35□□□□□ -2.03
SDF4Q9BRK5 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.35□□□□□ -2.03
SDF4Q9BRK5 ZNF885P-201ENST00000420174 1098 ntBASIC2.35□□□□□ -2.03
SDF4Q9BRK5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.35□□□□□ -2.03
SDF4Q9BRK5 AC012306.1-201ENST00000423267 114 ntBASIC2.35□□□□□ -2.03
SDF4Q9BRK5 AL645568.3-201ENST00000433683 316 ntBASIC2.35□□□□□ -2.03
SDF4Q9BRK5 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.35□□□□□ -2.03
SDF4Q9BRK5 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.35□□□□□ -2.03
SDF4Q9BRK5 RNU7-66P-201ENST00000459469 62 ntBASIC2.35□□□□□ -2.03
SDF4Q9BRK5 AC007547.1-201ENST00000462177 490 ntBASIC2.35□□□□□ -2.03
SDF4Q9BRK5 AC093259.1-201ENST00000509755 300 ntBASIC2.35□□□□□ -2.03
SDF4Q9BRK5 FAM206BP-201ENST00000510179 541 ntBASIC2.35□□□□□ -2.03
SDF4Q9BRK5 EIF4A1P12-201ENST00000551910 141 ntBASIC2.35□□□□□ -2.03
SDF4Q9BRK5 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.35□□□□□ -2.03
SDF4Q9BRK5 AL158827.2-201ENST00000602494 330 ntBASIC2.35□□□□□ -2.03
SDF4Q9BRK5 CTHRC1P1-201ENST00000605383 469 ntBASIC2.35□□□□□ -2.03
SDF4Q9BRK5 AL691447.3-201ENST00000635020 330 ntBASIC2.35□□□□□ -2.03
SDF4Q9BRK5 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
SDF4Q9BRK5 Y_RNA.89-201ENST00000363031 102 ntBASIC2.34□□□□□ -2.03
SDF4Q9BRK5 RNU6-743P-201ENST00000364151 106 ntBASIC2.34□□□□□ -2.03
SDF4Q9BRK5 RNU4-12P-201ENST00000365233 139 ntBASIC2.34□□□□□ -2.03
SDF4Q9BRK5 SNORA36A-201ENST00000384221 132 ntBASIC2.34□□□□□ -2.03
SDF4Q9BRK5 AL357139.1-201ENST00000407792 426 ntBASIC2.34□□□□□ -2.03
SDF4Q9BRK5 RNA5SP450-201ENST00000411206 102 ntBASIC2.34□□□□□ -2.03
SDF4Q9BRK5 VN1R36P-201ENST00000414936 291 ntBASIC2.34□□□□□ -2.03
SDF4Q9BRK5 MTND3P9-201ENST00000429526 346 ntBASIC2.34□□□□□ -2.03
SDF4Q9BRK5 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.34□□□□□ -2.03
SDF4Q9BRK5 AC021146.2-201ENST00000504736 556 ntBASIC2.34□□□□□ -2.03
SDF4Q9BRK5 AC109446.1-201ENST00000566172 220 ntBASIC2.34□□□□□ -2.03
SDF4Q9BRK5 MIR8076-201ENST00000611401 83 ntBASIC2.34□□□□□ -2.03
SDF4Q9BRK5 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
SDF4Q9BRK5 AC139792.2-201ENST00000624218 587 ntBASIC2.34□□□□□ -2.03
SDF4Q9BRK5 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SDF4Q9BRK5 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.34□□□□□ -2.03
SDF4Q9BRK5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.04
SDF4Q9BRK5 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SDF4Q9BRK5 Y_RNA.6-201ENST00000362350 114 ntBASIC2.33□□□□□ -2.04
SDF4Q9BRK5 RNU6-534P-201ENST00000364877 106 ntBASIC2.33□□□□□ -2.04
SDF4Q9BRK5 RNU6-234P-201ENST00000365229 104 ntBASIC2.33□□□□□ -2.04
SDF4Q9BRK5 RNU6-378P-201ENST00000384324 107 ntBASIC2.33□□□□□ -2.04
SDF4Q9BRK5 MIR1283-2-201ENST00000408621 87 ntBASIC2.33□□□□□ -2.04
SDF4Q9BRK5 RNA5SP118-201ENST00000410385 109 ntBASIC2.33□□□□□ -2.04
SDF4Q9BRK5 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.33□□□□□ -2.04
SDF4Q9BRK5 MTND1P23-201ENST00000416931 372 ntBASIC2.33□□□□□ -2.04
SDF4Q9BRK5 C8orf59P1-201ENST00000429930 303 ntBASIC2.33□□□□□ -2.04
SDF4Q9BRK5 AL445646.1-201ENST00000431784 216 ntBASIC2.33□□□□□ -2.04
SDF4Q9BRK5 USP9YP28-201ENST00000435142 589 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms